Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_005718 Daucus carota HOM05D012331 ORTHO05D004468 0.0e+00 1310.4 690 100.0
DCAR_017177 Daucus carota HOM05D012331 ORTHO05D004468 1.9e-125 454.1 505 52.1
DCAR_005094 Daucus carota HOM05D012331 ORTHO05D004468 2.4e-64 251.1 718 30.8
DCAR_030266 Daucus carota HOM05D012331 ORTHO05D004468 6.5e-62 243.0 416 37.3
DCAR_015962 Daucus carota HOM05D012331 ORTHO05D004468 4.0e-59 233.8 401 36.7
DCAR_030268 Daucus carota HOM05D012331 ORTHO05D004468 1.7e-57 228.4 652 30.7
DCAR_030263 Daucus carota HOM05D012331 ORTHO05D004468 5.2e-43 180.3 351 35.3
DCAR_019389 Daucus carota HOM05D012331 ORTHO05D004468 1.2e-39 169.1 691 26.6
DCAR_024191 Daucus carota HOM05D004122 ORTHO05D004468 2.9e-25 121.3 595 24.4
DCAR_027640 Daucus carota HOM05D004122 ORTHO05D004468 1.9e-24 118.6 665 22.6
DCAR_027728 Daucus carota HOM05D004122 ORTHO05D004468 1.9e-24 118.6 665 22.6
DCAR_028517 Daucus carota HOM05D012331 ORTHO05D004468 3.2e-24 117.9 284 30.6
DCAR_017391 Daucus carota HOM05D012331 ORTHO05D004468 7.1e-24 116.7 103 51.5
DCAR_004018 Daucus carota HOM05D004122 ORTHO05D004468 1.2e-23 115.9 516 24.2
DCAR_010309 Daucus carota HOM05D004122 ORTHO05D004468 2.1e-23 115.2 530 23.8
DCAR_011921 Daucus carota HOM05D004122 ORTHO05D004468 6.6e-22 110.2 620 22.9
DCAR_029037 Daucus carota HOM05D004122 ORTHO05D004468 1.9e-21 108.6 647 22.4
DCAR_001014 Daucus carota HOM05D004122 ORTHO05D004468 6.2e-20 103.6 245 31.8
DCAR_027726 Daucus carota HOM05D004122 ORTHO05D004468 3.1e-19 101.3 291 26.1
DCAR_028554 Daucus carota HOM05D004122 ORTHO05D004468 1.2e-18 99.4 616 23.4
DCAR_028573 Daucus carota HOM05D004122 ORTHO05D004468 1.2e-18 99.4 608 22.5
DCAR_001065 Daucus carota HOM05D012571 ORTHO05D004468 3.4e-18 97.8 359 23.4
DCAR_028659 Daucus carota HOM05D004122 ORTHO05D004468 6.4e-17 93.6 396 23.7
Gohir.A10G205900 Gossypium hirsutum HOM05D000003 ORTHO05D000006 1.1e-16 92.8 323 22.9
DCAR_007691 Daucus carota HOM05D004122 ORTHO05D004468 1.4e-16 92.4 536 23.9
DCAR_031546 Daucus carota HOM05D004122 ORTHO05D004468 1.9e-16 92.0 262 27.1
DCAR_000971 Daucus carota HOM05D004122 ORTHO05D004468 5.4e-16 90.5 330 23.3
DCAR_014809 Daucus carota HOM05D004122 ORTHO05D004468 5.4e-16 90.5 604 23.7
DCAR_031569 Daucus carota HOM05D004122 ORTHO05D004468 7.1e-16 90.1 597 22.3
DCAR_007894 Daucus carota HOM05D004122 ORTHO05D004468 2.7e-15 88.2 615 22.3
DCAR_000822 Daucus carota HOM05D004122 ORTHO05D004468 4.6e-15 87.4 295 25.8
DCAR_027457 Daucus carota HOM05D004122 ORTHO05D004468 4.6e-15 87.4 310 21.3
DCAR_002328 Daucus carota HOM05D004122 ORTHO05D004468 6.0e-15 87.0 336 23.5
DCAR_028793 Daucus carota HOM05D004122 ORTHO05D004468 7.8e-15 86.7 321 25.2
DCAR_028561 Daucus carota HOM05D004122 ORTHO05D004468 1.3e-14 85.9 461 22.1
DCAR_031541 Daucus carota HOM05D004122 ORTHO05D004468 1.3e-14 85.9 387 24.0
DCAR_017339 Daucus carota HOM05D004122 ORTHO05D004468 1.7e-14 85.5 376 24.7
DCAR_000311 Daucus carota HOM05D004122 ORTHO05D004468 3.9e-14 84.3 311 22.8
DCAR_017663 Daucus carota HOM05D004122 ORTHO05D004468 3.9e-14 84.3 361 23.8
DCAR_022968 Daucus carota HOM05D004122 ORTHO05D004468 3.9e-14 84.3 339 23.6
DCAR_005256 Daucus carota HOM05D004122 ORTHO05D004468 6.6e-14 83.6 303 24.8
DCAR_010326 Daucus carota HOM05D012571 ORTHO05D004468 1.1e-13 82.8 300 26.3
DCAR_024510 Daucus carota HOM05D004122 ORTHO05D004468 1.1e-13 82.8 310 23.2
DCAR_030158 Daucus carota HOM05D004122 ORTHO05D004468 7.3e-13 80.1 381 23.9
DCAR_030595 Daucus carota HOM05D004122 ORTHO05D004468 9.6e-13 79.7 533 25.7
DCAR_024869 Daucus carota HOM05D012571 ORTHO05D004468 3.6e-12 77.8 304 23.7
DCAR_024668 Daucus carota HOM05D004122 ORTHO05D004468 4.8e-12 77.4 446 20.6
DCAR_002213 Daucus carota HOM05D004122 ORTHO05D004468 8.1e-12 76.6 300 23.7
DCAR_015972 Daucus carota HOM05D004122 ORTHO05D004468 1.1e-11 76.3 724 21.3
Lj2g0003501 Lotus japonicus HOM05D002777 ORTHO05D001516 1.1e-11 76.3 320 22.2
Lj4g0023448 Lotus japonicus HOM05D002777 ORTHO05D001516 1.1e-11 76.3 172 29.1
Lj2g0007640 Lotus japonicus HOM05D002777 ORTHO05D001516 1.4e-11 75.9 209 27.3
Lj3g0021288 Lotus japonicus HOM05D002777 ORTHO05D001516 1.8e-11 75.5 330 23.6
Lj6g0021963 Lotus japonicus HOM05D002777 ORTHO05D001516 1.8e-11 75.5 346 22.8
Lj3g0021978 Lotus japonicus HOM05D002777 ORTHO05D001516 3.1e-11 74.7 360 23.9
Lj2g0005575 Lotus japonicus HOM05D002777 ORTHO05D001516 4.0e-11 74.3 405 23.5
Lj4g0021570 Lotus japonicus HOM05D002777 ORTHO05D001516 5.3e-11 73.9 330 23.3
DCAR_029295 Daucus carota HOM05D012331 ORTHO05D004468 6.9e-11 73.6 165 33.3
Lj4g0007213 Lotus japonicus HOM05D002777 ORTHO05D001516 6.9e-11 73.6 404 21.3
DCAR_022836 Daucus carota HOM05D012331 ORTHO05D004468 9.0e-11 73.2 112 48.2
Lj1g0017175 Lotus japonicus HOM05D002777 ORTHO05D001516 2.0e-10 72.0 318 25.2
Lj2g0018575 Lotus japonicus HOM05D002777 ORTHO05D001516 2.0e-10 72.0 241 23.7
DCAR_013804 Daucus carota HOM05D004122 ORTHO05D004468 4.5e-10 70.9 383 21.9
Lj3g0022675 Lotus japonicus HOM05D002777 ORTHO05D001516 2.9e-09 68.2 164 28.7
Lj2g0014793 Lotus japonicus HOM05D002777 ORTHO05D001516 3.8e-09 67.8 289 23.9
DCAR_022710 Daucus carota HOM05D004122 ORTHO05D004468 4.9e-09 67.4 360 20.8
DCAR_022666 Daucus carota HOM05D004122 ORTHO05D004468 8.4e-09 66.6 360 23.1
Lj2g0018386 Lotus japonicus HOM05D002777 ORTHO05D001516 8.4e-09 66.6 323 22.3
Lj4g0011576 Lotus japonicus HOM05D002777 ORTHO05D001516 8.4e-09 66.6 277 22.7
ECA233G3163 Erigeron canadensis HOM05D000003 ORTHO05D000004 1.4e-08 65.9 318 22.0
Phvul.003G099400 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 1.4e-08 65.9 272 22.8
LjContig00357g0018592 Lotus japonicus HOM05D002777 ORTHO05D001516 1.9e-08 65.5 139 30.9
LjContig00357g0023212 Lotus japonicus HOM05D002777 ORTHO05D001516 2.4e-08 65.1 295 20.3
Lj5g0007242 Lotus japonicus HOM05D002777 ORTHO05D001516 9.3e-08 63.2 315 23.5
Lj1g0026724 Lotus japonicus HOM05D002777 ORTHO05D001516 1.2e-07 62.8 109 33.9
Lj1g0014390 Lotus japonicus HOM05D002777 ORTHO05D001516 1.6e-07 62.4 330 21.5
Lj5g0007060 Lotus japonicus HOM05D002777 ORTHO05D001516 1.6e-07 62.4 183 27.3
Phvul.009G005600 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 1.6e-07 62.4 254 21.7
Phvul.010G066000 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 1.6e-07 62.4 255 24.3
vmacro21269 Vaccinium macrocarpon HOM05D005003 ORTHO05D006220 1.6e-07 62.4 249 24.1
Phvul.010G078700 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 2.1e-07 62.0 270 22.6
Glyma.13G027700 Glycine max HOM05D002777 ORTHO05D001516 3.5e-07 61.2 358 22.1
Lsat_1_v5_gn_7_23940 Lactuca sativa HOM05D003915 ORTHO05D005386 3.5e-07 61.2 333 20.4
Lj2g0000568 Lotus japonicus HOM05D002777 ORTHO05D001516 3.5e-07 61.2 326 21.8
Lj2g0021049 Lotus japonicus HOM05D002777 ORTHO05D001516 3.5e-07 61.2 180 27.2
DCAR_000786 Daucus carota HOM05D004122 ORTHO05D004468 4.6e-07 60.8 329 19.8
Lj4g0027037 Lotus japonicus HOM05D002777 ORTHO05D001516 4.6e-07 60.8 309 22.7
RhsimUnG0200600 Rhododendron simsii HOM05D008219 ORTHO05D009356 4.6e-07 60.8 237 21.9
DCAR_015816 Daucus carota HOM05D012571 ORTHO05D004468 6.0e-07 60.5 192 25.0
Glyma.06G268900 Glycine max HOM05D002777 ORTHO05D001516 6.0e-07 60.5 359 19.5
Lj2g0009215 Lotus japonicus HOM05D002777 ORTHO05D001516 1.0e-06 59.7 164 26.8
Lj2g0025364 Lotus japonicus HOM05D002777 ORTHO05D001516 1.0e-06 59.7 185 23.8
Lj4g0008907 Lotus japonicus HOM05D002777 ORTHO05D001516 1.0e-06 59.7 157 29.3
Lj4g0013222 Lotus japonicus HOM05D002777 ORTHO05D001516 1.0e-06 59.7 295 22.7
Phvul.006G023800 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 1.3e-06 59.3 372 22.3
arahy.Tifrunner.gnm1.ann1.2029P5 Arachis hypogaea HOM05D012808 ORTHO05D011705 1.8e-06 58.9 163 26.4
Phvul.004G009401 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 1.8e-06 58.9 302 22.5
Phvul.L001950 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 1.8e-06 58.9 246 21.1
Lj1g0025117 Lotus japonicus HOM05D002777 ORTHO05D001516 2.3e-06 58.5 168 26.2
Lj6g0003824 Lotus japonicus HOM05D002777 ORTHO05D001516 2.3e-06 58.5 167 24.0
LjContig00141g0014263 Lotus japonicus HOM05D002777 ORTHO05D001516 2.3e-06 58.5 152 27.0
DCAR_026085 Daucus carota HOM05D004122 ORTHO05D004468 3.0e-06 58.2 636 21.1
Lj6g0012166 Lotus japonicus HOM05D002777 ORTHO05D001516 3.9e-06 57.8 166 27.1
Lj3g0017258 Lotus japonicus HOM05D002777 ORTHO05D001516 5.1e-06 57.4 237 25.7
Phvul.001G161800 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 5.1e-06 57.4 310 21.0
Lj2g0011520 Lotus japonicus HOM05D002777 ORTHO05D001516 6.7e-06 57.0 306 20.9
Phvul.001G065800 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 6.7e-06 57.0 282 19.5
Phvul.005G131700 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 6.7e-06 57.0 415 20.0
Rhsim13G0125400 Rhododendron simsii HOM05D008219 ORTHO05D009356 6.7e-06 57.0 356 20.2
DCAR_030487 Daucus carota HOM05D004122 ORTHO05D004468 8.7e-06 56.6 107 33.6
Phvul.011G184000 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 8.7e-06 56.6 277 23.1


User provided reference genes

Program Settings