Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_005689 Daucus carota HOM05D004208 ORTHO05D005156 8.1e-280 966.5 502 100.0
Dinv22405 Davidia involucrata HOM05D004208 ORTHO05D005156 7.9e-166 587.8 507 61.5
Lj2A1151T32 Lonicera japonica HOM05D004208 ORTHO05D005156 1.3e-163 580.5 511 61.4
Actinidia07297 Actinidia chinensis HOM05D004208 ORTHO05D005156 7.4e-156 554.7 510 59.4
Hma1.2p1_0273F.1_g109690 Hydrangea macrophylla HOM05D004208 ORTHO05D005156 2.2e-155 553.1 510 60.0
GSVIVG01028335001 Vitis vinifera HOM05D004208 ORTHO05D005156 2.0e-153 546.6 506 59.5
TAR636G1466 Trochodendron aralioides HOM05D004208 ORTHO05D005156 5.9e-153 545.0 509 58.0
CSS0041954 Camellia sinensis var. sinensis HOM05D004208 ORTHO05D005156 1.4e-151 540.4 510 57.1
Thecc.01G258100 Theobroma cacao HOM05D004208 ORTHO05D005156 3.6e-150 535.8 509 57.8
CSS0038412 Camellia sinensis var. sinensis HOM05D004208 ORTHO05D005156 7.9e-150 534.6 510 56.5
Actinidia25791 Actinidia chinensis HOM05D004208 ORTHO05D005156 1.5e-148 530.4 523 55.8
Gohir.A08G190100 Gossypium hirsutum HOM05D004208 ORTHO05D005156 7.4e-148 528.1 508 57.5
Sopen01g041810 Solanum pennellii HOM05D004208 ORTHO05D005156 7.4e-148 528.1 517 54.7
Duzib138G0474 Durio zibethinus HOM05D004208 ORTHO05D005156 1.3e-147 527.3 509 57.0
Solyc01g098230.3 Solanum lycopersicum HOM05D004208 ORTHO05D005156 4.8e-147 525.4 517 54.9
Migut.O00608 Erythranthe guttata HOM05D004208 ORTHO05D005156 1.4e-146 523.9 514 56.2
Gorai.004G221000 Gossypium raimondii HOM05D004208 ORTHO05D005156 1.8e-146 523.5 509 57.0
Gohir.D08G208600 Gossypium hirsutum HOM05D004208 ORTHO05D005156 3.1e-146 522.7 509 57.0
CAN.G134.214 Capsicum annuum HOM05D004208 ORTHO05D005156 5.3e-146 521.9 512 54.9
Cfa012194 Carpinus fangiana HOM05D004208 ORTHO05D005156 3.4e-145 519.2 467 59.7
CANSAT01G2107 Cannabis sativa HOM05D004208 ORTHO05D005156 4.5e-145 518.8 515 56.1
Peaxi162Scf00225g00519 Petunia axillaris HOM05D004208 ORTHO05D005156 7.7e-145 518.1 529 52.7
CDE03G0182 Ceratophyllum demersum HOM05D004208 ORTHO05D005156 8.5e-144 514.6 506 54.7
COL.COLO4_05893 Corchorus olitorius HOM05D004208 ORTHO05D005156 1.9e-143 513.5 518 55.4
Migut.N01348 Erythranthe guttata HOM05D004208 ORTHO05D005156 3.2e-143 512.7 514 55.4
Manes.12G032400 Manihot esculenta HOM05D004208 ORTHO05D005156 4.2e-143 512.3 509 55.4
Duzib133G1203 Durio zibethinus HOM05D004208 ORTHO05D005156 9.4e-143 511.1 509 55.0
SalBow1G3185 Salvia bowleyana HOM05D004208 ORTHO05D005156 2.1e-142 510.0 508 54.9
CiPaw.11G131900 Carya illinoinensis HOM05D004208 ORTHO05D005156 1.4e-141 507.3 478 56.9
Nitab4.5_0000245g0150 Nicotiana tabacum HOM05D004208 ORTHO05D005156 1.4e-141 507.3 506 54.5
PSO339G3828 Papaver somniferum HOM05D004208 ORTHO05D005156 3.0e-141 506.1 510 54.9
PGR031G1029 Punica granatum HOM05D004208 ORTHO05D005156 5.1e-141 505.4 511 54.8
Prupe.8G223600 Prunus persica HOM05D004208 ORTHO05D005156 6.7e-141 505.0 509 54.2
CsaV3_5G028820 Cucumis sativus L. HOM05D004208 ORTHO05D005156 8.8e-141 504.6 510 54.7
AT2G36070 Arabidopsis thaliana HOM05D004208 ORTHO05D005156 2.0e-140 503.4 506 54.7
Atru.chr5.1689 Acer truncatum HOM05D004208 ORTHO05D005156 4.4e-140 502.3 507 55.8
Manes.13G034400 Manihot esculenta HOM05D004208 ORTHO05D005156 1.7e-139 500.4 509 54.0
Haze_08822 Corylus avellana HOM05D004208 ORTHO05D005156 3.7e-139 499.2 496 55.8
Aa31LG8G17460 Aethionema arabicum HOM05D004208 ORTHO05D005156 4.1e-138 495.7 509 54.0
FAN17G2653 Fragaria x ananassa HOM05D004208 ORTHO05D005156 7.0e-138 495.0 511 54.0
Cc01_g18340 Coffea canephora HOM05D004208 ORTHO05D005156 2.0e-137 493.4 514 54.1
AUR62030125 Chenopodium quinoa HOM05D004208 ORTHO05D005156 2.6e-137 493.0 510 54.1
Dinv34629 Davidia involucrata HOM05D004208 ORTHO05D005156 5.9e-137 491.9 429 62.0
Sed0003224 Sechium edule HOM05D004208 ORTHO05D005156 1.3e-136 490.7 509 54.0
AL4G32160 Arabidopsis lyrata HOM05D004208 ORTHO05D005156 1.7e-136 490.3 506 53.4
HanXRQChr16g0512021 Helianthus annuus HOM05D004208 ORTHO05D005156 5.0e-136 488.8 513 53.8
AUR62038602 Chenopodium quinoa HOM05D004208 ORTHO05D005156 1.4e-135 487.3 510 53.3
Lsat_1_v5_gn_7_79121 Lactuca sativa HOM05D004208 ORTHO05D005156 1.4e-135 487.3 511 54.4
QL12p032241 Quercus lobata HOM05D004208 ORTHO05D005156 1.9e-135 486.9 466 56.2
Sed0002598 Sechium edule HOM05D004208 ORTHO05D005156 3.2e-135 486.1 510 53.3
Eucgr.G01944 Eucalyptus grandis HOM05D004208 ORTHO05D005156 5.5e-135 485.3 439 58.8
Sabra05G0173200 Salix brachista HOM05D004208 ORTHO05D005156 5.5e-135 485.3 524 53.8
Ah.03g147410 Amaranthus hybridus HOM05D004208 ORTHO05D005156 1.2e-134 484.2 515 52.8
Potri.005G224500 Populus trichocarpa HOM05D004208 ORTHO05D005156 1.2e-134 484.2 509 53.8
AL3G53520 Arabidopsis lyrata HOM05D004208 ORTHO05D005156 3.6e-134 482.6 509 51.5
FvH4_4g12040 Fragaria vesca HOM05D004208 ORTHO05D005156 8.0e-134 481.5 509 52.8
FAN20G2986 Fragaria x ananassa HOM05D004208 ORTHO05D005156 1.4e-133 480.7 501 52.5
Potri.002G038300 Populus trichocarpa HOM05D004208 ORTHO05D005156 1.4e-133 480.7 508 53.0
SGA_v2.0_scaffold32G13335 Striga asiatica HOM05D004208 ORTHO05D005156 2.3e-133 479.9 508 53.7
FAN07G0785 Fragaria x ananassa HOM05D004208 ORTHO05D005156 5.2e-133 478.8 540 50.7
RcHm_v2.0_Chr6g0288111 Rosa chinensis HOM05D004208 ORTHO05D005156 6.7e-133 478.4 509 51.9
Nitab4.5_0001165g0160 Nicotiana tabacum HOM05D004208 ORTHO05D005156 8.8e-133 478.0 455 55.4
MSTRG.16949 Avicennia marina HOM05D004208 ORTHO05D005156 1.1e-132 477.6 506 52.0
Peaxi162Scf00225g00527 Petunia axillaris HOM05D004208 ORTHO05D005156 1.1e-132 477.6 512 50.8
FAN27G3501 Fragaria x ananassa HOM05D004208 ORTHO05D005156 3.3e-132 476.1 495 52.7
Actinidia09547 Actinidia chinensis HOM05D004208 ORTHO05D005156 4.4e-132 475.7 509 53.8
TWI32G0756 Tripterygium wilfordii HOM05D004208 ORTHO05D005156 4.8e-131 472.2 506 53.2
EL10Ac7g17258 Beta vulgaris HOM05D004208 ORTHO05D005156 8.2e-131 471.5 454 55.1
Carub.0004s1781 Capsella rubella HOM05D004208 ORTHO05D005156 1.8e-130 470.3 506 51.4
SGA_v2.0_scaffold58G20323 Striga asiatica HOM05D004208 ORTHO05D005156 5.3e-130 468.8 420 58.8
Ah.02g120380 Amaranthus hybridus HOM05D004208 ORTHO05D005156 7.0e-130 468.4 509 51.1
FAN15G2877 Fragaria x ananassa HOM05D004208 ORTHO05D005156 1.6e-129 467.2 532 50.0
Ciclev10019992m.g Citrus clementina HOM05D004208 ORTHO05D005156 4.5e-129 465.7 507 53.5
TAR362G0204 Trochodendron aralioides HOM05D004208 ORTHO05D005156 5.9e-129 465.3 452 57.1
Thhalv10001977m.g Eutrema salsugineum HOM05D004208 ORTHO05D005156 1.7e-128 463.8 507 51.9
FvH4_2g21470 Fragaria vesca HOM05D004208 ORTHO05D005156 2.9e-128 463.0 509 50.9
Psat7g228960 Pisum sativum HOM05D004208 ORTHO05D005156 1.9e-127 460.3 506 51.8
FAN24G2300 Fragaria x ananassa HOM05D004208 ORTHO05D005156 9.4e-127 458.0 484 52.5
Glyma.04G107400 Glycine max HOM05D004208 ORTHO05D005156 2.1e-126 456.8 510 51.0
Sabra02G0030700 Salix brachista HOM05D004208 ORTHO05D005156 4.0e-125 452.6 483 52.2
MD05G1197100 Malus domestica HOM05D004208 ORTHO05D005156 8.8e-125 451.4 516 51.6
ATR0736G190 Amborella trichopoda HOM05D004208 ORTHO05D005156 1.5e-124 450.7 513 50.5
Rhsim01G0263600 Rhododendron simsii HOM05D004208 ORTHO05D005156 2.0e-124 450.3 514 51.0
Sp3g33730 Schrenkiella parvula HOM05D004208 ORTHO05D005156 9.7e-124 448.0 507 50.9
BcaB07g31584 Brassica carinata HOM05D004208 ORTHO05D005156 1.3e-123 447.6 500 51.2
Phvul.005G002100 Phaseolus vulgaris HOM05D004208 ORTHO05D005156 2.2e-123 446.8 512 51.2
Oeu062471.2 Olea europaea HOM05D004208 ORTHO05D005156 8.2e-123 444.9 562 47.7
Nn3g19657 Nelumbo nucifera HOM05D004208 ORTHO05D005156 1.2e-121 441.0 511 49.5
BraA09t36939Z Brassica rapa HOM05D004208 ORTHO05D005156 2.7e-121 439.9 513 49.7
BolC9t54440H Brassica oleracea HOM05D004208 ORTHO05D005156 3.5e-121 439.5 512 50.2
AT2G20510 Arabidopsis thaliana HOM05D004208 ORTHO05D005156 4.5e-121 439.1 506 47.0
BcaC04g22784 Brassica carinata HOM05D004208 ORTHO05D005156 2.2e-120 436.8 512 49.8
Aqoxy2G03649 Aquilegia oxysepala HOM05D004208 ORTHO05D005156 2.9e-120 436.4 509 49.3
A09p12940 Brassica napus HOM05D004208 ORTHO05D005156 3.8e-120 436.0 513 49.7
C09p15320 Brassica napus HOM05D004208 ORTHO05D005156 6.5e-120 435.3 512 49.6
BraA07t27815Z Brassica rapa HOM05D004208 ORTHO05D005156 8.5e-120 434.9 508 50.2
A07p00220 Brassica napus HOM05D004208 ORTHO05D005156 1.1e-119 434.5 508 50.4
Medtr2g083690 Medicago truncatula HOM05D004208 ORTHO05D005156 5.5e-119 432.2 505 50.1
RcHm_v2.0_Chr4g0409381 Rosa chinensis HOM05D004208 ORTHO05D005156 5.5e-119 432.2 449 51.7
BcaB03g16846 Brassica carinata HOM05D004208 ORTHO05D005156 8.0e-118 428.3 510 49.6
Cpa.g.sc81.94 Carica papaya HOM05D004208 ORTHO05D005156 1.8e-117 427.2 447 50.1
Ca_26001_v3 Cicer arietinum L. HOM05D004208 ORTHO05D005156 6.8e-117 425.2 512 48.0
arahy.Tifrunner.gnm1.ann1.W57KUE Arachis hypogaea HOM05D004208 ORTHO05D005156 2.6e-116 423.3 542 46.7
VMungo1080G0701 Vigna mungo HOM05D004208 ORTHO05D005156 9.8e-116 421.4 512 49.2
MBI10_g22594_MAGBIO Magnolia biondii HOM05D004208 ORTHO05D005156 1.7e-115 420.6 470 50.9
CARHR130310 Cardamine hirsuta HOM05D004208 ORTHO05D005156 4.8e-115 419.1 506 49.4
BolC7t40497H Brassica oleracea HOM05D004208 ORTHO05D005156 6.3e-115 418.7 507 48.1
Carub.0003s3496 Capsella rubella HOM05D004208 ORTHO05D005156 9.1e-114 414.8 504 47.2
Eucgr.B01552 Eucalyptus grandis HOM05D004208 ORTHO05D005156 2.7e-113 413.3 531 48.2
FAN12G3775 Fragaria x ananassa HOM05D004208 ORTHO05D005156 3.5e-113 412.9 557 45.4
Lalb_Chr15g0090311 Lupinus albus HOM05D004208 ORTHO05D005156 3.5e-113 412.9 514 48.1
BcaB08g34912 Brassica carinata HOM05D004208 ORTHO05D005156 4.5e-113 412.5 493 48.1
BcaC06g36740 Brassica carinata HOM05D004208 ORTHO05D005156 4.5e-113 412.5 507 48.1
FAN12G0345 Fragaria x ananassa HOM05D004208 ORTHO05D005156 4.5e-113 412.5 557 45.4
TWI34G1830 Tripterygium wilfordii HOM05D004208 ORTHO05D005156 5.0e-112 409.1 506 47.6
ECA236G3853 Erigeron canadensis HOM05D004208 ORTHO05D000364 4.2e-111 406.0 501 47.9
Zm00001eb111900 Zea mays HOM05D004208 ORTHO05D005156 1.6e-110 404.1 494 47.2
MELO3C033986.2 Cucumis melo HOM05D004208 ORTHO05D005156 2.8e-110 403.3 550 44.5
CDE04G1955 Ceratophyllum demersum HOM05D004208 ORTHO05D005156 4.7e-110 402.5 405 53.3
THA.LOC104805532 Tarenaya hassleriana HOM05D004208 ORTHO05D005156 2.3e-109 400.2 510 45.5
C07p00510 Brassica napus HOM05D004208 ORTHO05D005156 3.4e-108 396.4 507 46.2
TPR.G5025 Trifolium pratense HOM05D004208 ORTHO05D005156 2.2e-107 393.7 418 50.5
CSS0015888 Camellia sinensis var. sinensis HOM05D004208 ORTHO05D005156 8.3e-107 391.7 488 48.0
HPP92_012187 Vanilla planifolia HOM05D004208 ORTHO05D005156 8.3e-107 391.7 467 47.5
Medtr4g075680 Medicago truncatula HOM05D004208 ORTHO05D005156 1.1e-106 391.3 506 46.0
Peaxi162Scf00118g00111 Petunia axillaris HOM05D004208 ORTHO05D005156 7.3e-103 378.6 396 51.5
arahy.Tifrunner.gnm1.ann1.M6MGA2 Arachis hypogaea HOM05D004208 ORTHO05D005156 9.8e-100 368.2 509 44.6
Nitab4.5_0001526g0060 Nicotiana tabacum HOM05D004208 ORTHO05D005156 2.4e-98 363.6 468 46.2
Os07g0409700 Oryza sativa ssp. japonica HOM05D004208 ORTHO05D005156 5.4e-98 362.5 480 44.8
Oeu042777.2 Olea europaea HOM05D004208 ORTHO05D005156 1.2e-97 361.3 516 44.8
Medtr4g029490 Medicago truncatula HOM05D004208 ORTHO05D005156 2.3e-96 357.1 506 42.5
Nitab4.5_0007798g0030 Nicotiana tabacum HOM05D004208 ORTHO05D005156 1.5e-95 354.4 512 45.5
Lj6g0013651 Lotus japonicus HOM05D004208 ORTHO05D005156 1.2e-89 334.7 513 42.7
SMO353G0191 Selaginella moellendorffii HOM05D004208 ORTHO05D005156 1.1e-85 321.6 449 41.4
SEGI_36648 Sequoiadendron giganteum HOM05D004208 ORTHO05D005156 8.9e-85 318.5 416 46.6
BcaC07g41210 Brassica carinata HOM05D004208 ORTHO05D005156 7.5e-84 315.5 428 44.6
Oeu021968.1 Olea europaea HOM05D004208 ORTHO05D005156 7.5e-84 315.5 485 42.7
CBR_g30902 Chara braunii HOM05D004208 ORTHO05D005156 8.3e-83 312.0 468 40.2
PGSC0003DMG400022489 Solanum tuberosum HOM05D004208 ORTHO05D005156 1.4e-82 311.2 231 64.9
Mapoly0070s0010 Marchantia polymorpha HOM05D004208 ORTHO05D005156 3.0e-80 303.5 384 44.3
Sc05g0000700 Simmondsia chinensis HOM05D004208 ORTHO05D005156 3.0e-80 303.5 351 51.0
Pp3c4_19960 Physcomitrium patens HOM05D004208 ORTHO05D005156 8.9e-77 292.0 330 46.1
Pp3c12_7570 Physcomitrium patens HOM05D004208 ORTHO05D005156 7.1e-74 282.3 372 41.9
AagrBONN_evm.TU.Sc2ySwM_344.3623 Anthoceros agrestis HOM05D004208 ORTHO05D005156 1.6e-73 281.2 330 46.1
ClCG01G005870 Citrullus lanatus HOM05D004208 ORTHO05D005156 3.5e-73 280.0 231 58.4
unitig_746.g26574 Utricularia gibba HOM05D004208 ORTHO05D005156 3.9e-72 276.6 237 54.9
Lalb_Chr06g0171061 Lupinus albus HOM05D004208 ORTHO05D005156 4.3e-55 219.9 191 56.0
HanXRQChr10g0294161 Helianthus annuus HOM05D004208 ORTHO05D005156 9.9e-52 208.8 236 52.1
Lalb_Chr06g0171071 Lupinus albus HOM05D004208 ORTHO05D005156 6.9e-45 186.0 324 41.0
Actinidia37513 Actinidia chinensis HOM05D004208 ORTHO05D005156 6.1e-41 172.9 171 54.4
MCO02G332 Micromonas commoda HOM05D004208 ORTHO05D005156 9.0e-37 159.1 378 29.6
SEGI_05587 Sequoiadendron giganteum HOM05D004208 ORTHO05D005156 9.0e-37 159.1 150 49.3
SHI09778 Sapria himalayana HOM05D004208 ORTHO05D005156 1.0e-35 155.6 275 40.0
CAN.G279.25 Capsicum annuum HOM05D004208 ORTHO05D005156 2.1e-33 147.9 174 46.6
Cre16.g660800 Chlamydomonas reinhardtii HOM05D004208 ORTHO05D005156 2.0e-31 141.4 269 31.2
PRCOL_00004598 Prasinoderma coloniale HOM05D004208 ORTHO05D005156 2.2e-27 127.9 205 33.7
RcHm_v2.0_Chr5g0013581 Rosa chinensis HOM05D004208 ORTHO05D005156 6.7e-24 116.3 109 52.3
Rhsim01G0263500 Rhododendron simsii HOM05D004208 ORTHO05D005156 3.9e-16 90.5 125 52.0
Glyma.09G002800 Glycine max HOM05D004208 ORTHO05D005156 1.5e-15 88.6 91 47.3
SEGI_40921 Sequoiadendron giganteum HOM05D004208 ORTHO05D005156 7.4e-15 86.3 87 46.0
Aqoxy5G04369 Aquilegia oxysepala HOM05D004870 ORTHO05D006061 1.9e-10 71.6 116 44.8
CDE04G1040 Ceratophyllum demersum HOM05D004208 ORTHO05D005156 1.0e-08 65.9 98 45.9
Atru.chr3.4028 Acer truncatum HOM05D004208 ORTHO05D005156 4.8e-06 57.0 71 43.7
HanXRQChr10g0299451 Helianthus annuus HOM05D004208 ORTHO05D219928 8.3e-06 56.2 109 28.4


User provided reference genes

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