Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_005656 Daucus carota HOM05D006585 ORTHO05D007798 2.6e-46 188.3 92 100.0
DCAR_031138 Daucus carota HOM05D006585 ORTHO05D007798 1.1e-36 156.4 79 96.2
Gohir.A03G136500 Gossypium hirsutum HOM05D006585 ORTHO05D007798 8.6e-10 67.0 79 49.4
Solyc05g013360.3 Solanum lycopersicum HOM05D006585 ORTHO05D007798 8.6e-10 67.0 78 47.4
Dinv24805 Davidia involucrata HOM05D006585 ORTHO05D007798 1.1e-09 66.6 79 49.4
Gorai.005G179800 Gossypium raimondii HOM05D006585 ORTHO05D007798 1.5e-09 66.2 79 48.1
Nitab4.5_0002255g0100 Nicotiana tabacum HOM05D006585 ORTHO05D007798 5.6e-09 64.3 74 50.0
Thecc.02G257200 Theobroma cacao HOM05D006585 ORTHO05D007798 5.6e-09 64.3 79 48.1
QL03p058556 Quercus lobata HOM05D006585 ORTHO05D007798 9.5e-09 63.5 81 44.4
Peaxi162Scf00128g00033 Petunia axillaris HOM05D006585 ORTHO05D007798 2.1e-08 62.4 99 41.4
Sopen05g008150 Solanum pennellii HOM05D006585 ORTHO05D007798 2.1e-08 62.4 75 46.7
GSVIVG01004087001 Vitis vinifera HOM05D006585 ORTHO05D007798 2.1e-08 62.4 79 45.6
TWI36G0027 Tripterygium wilfordii HOM05D006585 ORTHO05D007798 8.0e-08 60.5 79 45.6
Duzib248G0505 Durio zibethinus HOM05D006585 ORTHO05D007798 1.0e-07 60.1 79 44.3
Actinidia08143 Actinidia chinensis HOM05D006585 ORTHO05D007798 1.8e-07 59.3 63 49.2
Cc11_g15560 Coffea canephora HOM05D006585 ORTHO05D007798 5.2e-07 57.8 65 53.8
Lj4g0008721 Lotus japonicus HOM05D006585 ORTHO05D007798 5.2e-07 57.8 55 52.7
Lj6C811T17 Lonicera japonica HOM05D006585 ORTHO05D007798 6.8e-07 57.4 72 45.8
Phvul.003G063800 Phaseolus vulgaris HOM05D006585 ORTHO05D007798 1.2e-06 56.6 55 52.7
MD13G1097800 Malus domestica HOM05D006585 ORTHO05D007798 1.5e-06 56.2 69 42.0
Oeu049180.1 Olea europaea HOM05D006585 ORTHO05D007798 1.5e-06 56.2 75 44.0
Cpa.g.sc33.3 Carica papaya HOM05D006585 ORTHO05D007798 2.6e-06 55.5 78 46.2
Lalb_Chr16g0392221 Lupinus albus HOM05D006585 ORTHO05D007798 2.6e-06 55.5 55 54.5
Potri.010G044800 Populus trichocarpa HOM05D006585 ORTHO05D007798 2.6e-06 55.5 74 48.6
Manes.13G025900 Manihot esculenta HOM05D006585 ORTHO05D007798 3.4e-06 55.1 47 63.8
Sed0016045 Sechium edule HOM05D006585 ORTHO05D007798 3.4e-06 55.1 78 43.6
FvH4_4g25900 Fragaria vesca HOM05D006585 ORTHO05D007798 4.4e-06 54.7 61 50.8
Ca_22577_v3 Cicer arietinum L. HOM05D006585 ORTHO05D007798 5.7e-06 54.3 52 50.0
Medtr8g069560 Medicago truncatula HOM05D006585 ORTHO05D007798 7.5e-06 53.9 75 42.7


User provided reference genes

Program Settings