Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_005623 Daucus carota HOM05D007324 ORTHO05D007884 1.5e-65 253.1 124 100.0
ECA240G0465 Erigeron canadensis HOM05D007324 ORTHO05D007884 1.5e-20 103.6 119 53.8
Eucgr.E00290 Eucalyptus grandis HOM05D007324 ORTHO05D007884 5.4e-18 95.1 120 53.3
Lsat_1_v5_gn_6_78560 Lactuca sativa HOM05D007324 ORTHO05D007884 9.2e-18 94.4 121 52.1
Glyma.17G155000 Glycine max HOM05D007324 ORTHO05D007884 3.5e-17 92.4 126 51.6
Actinidia14815 Actinidia chinensis HOM05D007324 ORTHO05D007884 2.3e-16 89.7 114 50.9
Glyma.05G112000 Glycine max HOM05D007324 ORTHO05D007884 2.3e-16 89.7 125 50.4
HanXRQChr03g0084061 Helianthus annuus HOM05D007324 ORTHO05D007884 2.9e-16 89.4 115 53.0
Oeu047787.1 Olea europaea HOM05D007324 ORTHO05D007884 3.8e-16 89.0 115 49.6
PGR042G1904 Punica granatum HOM05D007324 ORTHO05D007884 5.6e-15 85.1 113 50.4
CiPaw.11G092000 Carya illinoinensis HOM05D007324 ORTHO05D007884 7.3e-15 84.7 116 52.6
Migut.E01386 Erythranthe guttata HOM05D007324 ORTHO05D007884 2.1e-14 83.2 111 48.6
HanXRQChr02g0043531 Helianthus annuus HOM05D007324 ORTHO05D007884 4.7e-14 82.0 117 43.6
Solyc06g061110.2 Solanum lycopersicum HOM05D007324 ORTHO05D007884 4.7e-14 82.0 120 50.8
Sopen06g021310 Solanum pennellii HOM05D007324 ORTHO05D007884 4.7e-14 82.0 120 50.0
Ciclev10033018m.g Citrus clementina HOM05D007324 ORTHO05D007884 8.0e-14 81.3 122 48.4
CSS0048146 Camellia sinensis var. sinensis HOM05D007324 ORTHO05D007884 1.0e-13 80.9 120 45.0
arahy.Tifrunner.gnm1.ann1.0E68DR Arachis hypogaea HOM05D007324 ORTHO05D007884 1.8e-13 80.1 110 50.0
arahy.Tifrunner.gnm1.ann1.69TWVD Arachis hypogaea HOM05D007324 ORTHO05D007884 1.8e-13 80.1 110 50.0
Lj2A242T77 Lonicera japonica HOM05D007324 ORTHO05D007884 3.0e-13 79.3 122 45.9
CSS0008196 Camellia sinensis var. sinensis HOM05D007324 ORTHO05D007884 5.2e-13 78.6 120 44.2
Atru.chr6.1738 Acer truncatum HOM05D007324 ORTHO05D007884 2.6e-12 76.3 117 42.7
CSS0050429 Camellia sinensis var. sinensis HOM05D007324 ORTHO05D007884 2.6e-12 76.3 111 45.0
Cc08_g02520 Coffea canephora HOM05D007324 ORTHO05D007884 5.7e-12 75.1 76 61.8
Medtr4g098480 Medicago truncatula HOM05D007324 ORTHO05D007884 9.8e-12 74.3 142 45.8
Hma1.2p1_0585F.1_g183650 Hydrangea macrophylla HOM05D007324 ORTHO05D007884 2.2e-11 73.2 122 43.4
Phvul.003G230300 Phaseolus vulgaris HOM05D007324 ORTHO05D007884 1.8e-10 70.1 87 54.0
TWI81G0167 Tripterygium wilfordii HOM05D007324 ORTHO05D007884 9.2e-10 67.8 115 40.0
Cpa.g.sc18.65 Carica papaya HOM05D007324 ORTHO05D007884 1.2e-09 67.4 139 43.2
PSO478G0244 Papaver somniferum HOM05D007324 ORTHO05D007884 1.2e-09 67.4 144 39.6
Lalb_Chr16g0386011 Lupinus albus HOM05D007324 ORTHO05D007884 2.0e-09 66.6 110 42.7
PGSC0003DMG400002093 Solanum tuberosum HOM05D007324 ORTHO05D007884 3.5e-09 65.9 121 41.3
Haze_08257 Corylus avellana HOM05D007324 ORTHO05D007884 5.9e-09 65.1 98 51.0
Cfa012419 Carpinus fangiana HOM05D007324 ORTHO05D007884 7.8e-09 64.7 113 41.6
PSO782G2910 Papaver somniferum HOM05D007324 ORTHO05D007884 3.0e-08 62.8 61 62.3
PSO782G1330 Papaver somniferum HOM05D007324 ORTHO05D007884 3.9e-08 62.4 61 60.7
C05p32110 Brassica napus HOM05D007324 ORTHO05D007884 8.6e-08 61.2 115 42.6
BolC5t31940H Brassica oleracea HOM05D007324 ORTHO05D007884 8.6e-08 61.2 115 42.6
Psat4g078840 Pisum sativum HOM05D007324 ORTHO05D007884 8.6e-08 61.2 120 42.5
Potri.001G143700 Populus trichocarpa HOM05D007324 ORTHO05D007884 1.9e-07 60.1 102 43.1
vmacro22242 Vaccinium macrocarpon HOM05D007324 ORTHO05D007884 5.6e-07 58.5 62 58.1
Ah.07g200240 Amaranthus hybridus HOM05D007324 ORTHO05D007884 7.3e-07 58.2 95 48.4
Aa31LG9G15320 Aethionema arabicum HOM05D011082 ORTHO05D007884 9.5e-07 57.8 60 58.3
DCAR_008279 Daucus carota HOM05D007324 ORTHO05D007884 9.5e-07 57.8 119 37.8
Thhalv10009848m.g Eutrema salsugineum HOM05D007324 ORTHO05D007884 9.5e-07 57.8 82 52.4
Peaxi162Scf00615g00021 Petunia axillaris HOM05D007324 ORTHO05D007884 9.5e-07 57.8 90 44.4
CAN.G201.20 Capsicum annuum HOM05D007324 ORTHO05D007884 1.6e-06 57.0 124 41.1
EL10Ac5g12140 Beta vulgaris HOM05D028673 ORTHO05D031676 2.1e-06 56.6 120 38.3
MELO3C032260.2 Cucumis melo HOM05D007324 ORTHO05D007884 2.1e-06 56.6 68 50.0
BolC5t31929H Brassica oleracea HOM05D007324 ORTHO05D007884 4.7e-06 55.5 98 46.9
Rhsim07G0125700 Rhododendron simsii HOM05D007324 ORTHO05D007884 4.7e-06 55.5 118 39.8
BolC8t47935H Brassica oleracea HOM05D007324 ORTHO05D007884 8.0e-06 54.7 86 48.8
CANSAT21G2393 Cannabis sativa HOM05D007324 ORTHO05D007884 8.0e-06 54.7 93 38.7
SGA_v2.0_scaffold144G35830 Striga asiatica HOM05D007324 ORTHO05D007884 8.0e-06 54.7 67 49.3


User provided reference genes

Program Settings