Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_005602 Daucus carota HOM05D004955 ORTHO05D005965 0.0e+00 1090.1 557 100.0
Dinv28916 Davidia involucrata HOM05D004955 ORTHO05D005965 1.3e-246 856.3 555 78.0
QL12p007112 Quercus lobata HOM05D004955 ORTHO05D005965 1.4e-240 836.3 557 76.1
FvH4_5g21180 Fragaria vesca HOM05D004955 ORTHO05D005965 1.8e-240 835.9 557 75.4
Rhsim09G0128800 Rhododendron simsii HOM05D004955 ORTHO05D005965 2.4e-240 835.5 554 76.2
GSVIVG01013229001 Vitis vinifera HOM05D004955 ORTHO05D005965 5.4e-240 834.3 556 76.3
CSS0027312 Camellia sinensis var. sinensis HOM05D004955 ORTHO05D005965 2.0e-239 832.4 555 75.1
CSS0030337 Camellia sinensis var. sinensis HOM05D004955 ORTHO05D005965 4.5e-239 831.2 555 75.1
RcHm_v2.0_Chr7g0208321 Rosa chinensis HOM05D004955 ORTHO05D005965 5.9e-239 830.9 557 75.0
vmacro21668 Vaccinium macrocarpon HOM05D004955 ORTHO05D005965 1.0e-238 830.1 554 76.5
Prupe.5G046300 Prunus persica HOM05D004955 ORTHO05D005965 1.3e-238 829.7 556 75.0
Potri.001G146900 Populus trichocarpa HOM05D004955 ORTHO05D005965 2.9e-238 828.6 556 75.5
Lj3A396G10 Lonicera japonica HOM05D004955 ORTHO05D005965 3.8e-238 828.2 556 75.7
FAN18G2324 Fragaria x ananassa HOM05D004955 ORTHO05D005965 1.5e-237 826.2 576 72.9
GSVIVG01011242001 Vitis vinifera HOM05D004955 ORTHO05D005965 2.5e-237 825.5 556 75.5
arahy.Tifrunner.gnm1.ann1.JVPY2N Arachis hypogaea HOM05D004955 ORTHO05D005965 7.2e-237 823.9 557 73.8
arahy.Tifrunner.gnm1.ann1.U6D9EY Arachis hypogaea HOM05D004955 ORTHO05D005965 7.2e-237 823.9 557 73.8
FAN08G3652 Fragaria x ananassa HOM05D004955 ORTHO05D005965 1.4e-235 819.7 559 74.4
COL.COLO4_17563 Corchorus olitorius HOM05D004955 ORTHO05D005965 5.2e-235 817.8 556 74.5
Duzib213G0438 Durio zibethinus HOM05D004955 ORTHO05D005965 1.2e-234 816.6 556 74.1
Thecc.07G110200 Theobroma cacao HOM05D004955 ORTHO05D005965 5.7e-234 814.3 557 74.1
Ciclev10031124m.g Citrus clementina HOM05D004955 ORTHO05D005965 1.1e-232 810.1 556 74.8
Sopen08g025850 Solanum pennellii HOM05D004955 ORTHO05D005965 1.1e-232 810.1 556 75.0
Gorai.002G043000 Gossypium raimondii HOM05D004955 ORTHO05D005965 1.8e-232 809.3 556 73.6
Nitab4.5_0002055g0140 Nicotiana tabacum HOM05D004955 ORTHO05D005965 3.2e-232 808.5 555 74.2
Sabra01G0115600 Salix brachista HOM05D004955 ORTHO05D005965 5.4e-232 807.7 556 73.9
Gohir.D01G034800 Gossypium hirsutum HOM05D004955 ORTHO05D005965 1.2e-231 806.6 556 73.2
TAR375G0042 Trochodendron aralioides HOM05D004955 ORTHO05D005965 1.2e-231 806.6 556 74.1
Gohir.A01G044000 Gossypium hirsutum HOM05D004955 ORTHO05D005965 3.5e-231 805.1 556 72.8
MD06G1040100 Malus domestica HOM05D004955 ORTHO05D005965 4.6e-231 804.7 557 72.7
Solyc08g077270.4 Solanum lycopersicum HOM05D004955 ORTHO05D005965 5.9e-231 804.3 556 74.3
VMungo1215G2917 Vigna mungo HOM05D004955 ORTHO05D005965 7.8e-231 803.9 557 73.2
Ca_24631_v3 Cicer arietinum L. HOM05D004955 ORTHO05D005965 1.0e-230 803.5 557 73.2
CAN.G799.17 Capsicum annuum HOM05D004955 ORTHO05D005965 3.9e-230 801.6 556 74.1
FAN13G2236 Fragaria x ananassa HOM05D004955 ORTHO05D005965 5.0e-230 801.2 578 71.1
Psat2g174720 Pisum sativum HOM05D004955 ORTHO05D005965 6.6e-230 800.8 559 72.6
SalBow6G1446 Salvia bowleyana HOM05D004955 ORTHO05D005965 6.6e-230 800.8 555 73.3
Peaxi162Scf00084g00922 Petunia axillaris HOM05D004955 ORTHO05D005965 1.5e-229 799.7 582 71.3
Glyma.20G095000 Glycine max HOM05D004955 ORTHO05D005965 4.3e-229 798.1 557 73.1
MSTRG.1970 Avicennia marina HOM05D004955 ORTHO05D005965 3.6e-228 795.0 556 73.4
Medtr5g013970 Medicago truncatula HOM05D004955 ORTHO05D005965 6.1e-228 794.3 557 72.9
Lj2g0012431 Lotus japonicus HOM05D004955 ORTHO05D005965 1.8e-227 792.7 557 71.6
CiPaw.12G060300 Carya illinoinensis HOM05D004955 ORTHO05D005965 1.5e-226 789.6 559 72.5
Cpa.g.sc39.114 Carica papaya HOM05D004955 ORTHO05D005965 4.4e-226 788.1 556 71.4
Atru.BG.31.p Acer truncatum HOM05D004955 ORTHO05D005965 5.8e-226 787.7 536 75.4
FAN04G2254 Fragaria x ananassa HOM05D004955 ORTHO05D005965 5.8e-226 787.7 556 72.3
Nn1g00613 Nelumbo nucifera HOM05D004955 ORTHO05D005965 9.8e-226 786.9 556 73.4
PGR031G1993 Punica granatum HOM05D004955 ORTHO05D005965 1.3e-225 786.6 556 72.8
Glyma.07G096600 Glycine max HOM05D004955 ORTHO05D005965 1.7e-225 786.2 559 72.5
Phvul.002G003600 Phaseolus vulgaris HOM05D004955 ORTHO05D005965 3.7e-225 785.0 557 71.8
Migut.E00912 Erythranthe guttata HOM05D004955 ORTHO05D005965 4.9e-225 784.6 554 73.5
Migut.E00798 Erythranthe guttata HOM05D004955 ORTHO05D005965 1.1e-224 783.5 554 73.3
EL10Ac5g12196 Beta vulgaris HOM05D004955 ORTHO05D005965 1.4e-224 783.1 557 71.1
TWI81G0724 Tripterygium wilfordii HOM05D004955 ORTHO05D005965 4.6e-223 778.1 557 72.0
vmacro00352 Vaccinium macrocarpon HOM05D004955 ORTHO05D005965 6.0e-223 777.7 534 75.3
Aqoxy3G03106 Aquilegia oxysepala HOM05D004955 ORTHO05D005965 5.0e-222 774.6 588 68.9
PSO541G5086 Papaver somniferum HOM05D004955 ORTHO05D005965 6.6e-222 774.2 556 69.8
Oeu039341.2 Olea europaea HOM05D004955 ORTHO05D005965 7.3e-221 770.8 580 69.8
Eucgr.D02153 Eucalyptus grandis HOM05D004955 ORTHO05D005965 2.1e-220 769.2 556 72.1
MBI04_g44837_MAGBIO Magnolia biondii HOM05D004955 ORTHO05D005965 3.6e-220 768.5 573 70.5
Sc07g0008830 Simmondsia chinensis HOM05D004955 ORTHO05D005965 3.6e-220 768.5 556 70.0
PSO063G1154 Papaver somniferum HOM05D004955 ORTHO05D005965 2.3e-219 765.8 556 69.2
PSO017G5366 Papaver somniferum HOM05D004955 ORTHO05D005965 3.1e-219 765.4 556 69.2
Cc05_g03300 Coffea canephora HOM05D004955 ORTHO05D005965 5.2e-219 764.6 556 71.6
CsaV3_1G038770 Cucumis sativus L. HOM05D004955 ORTHO05D005965 5.2e-219 764.6 558 69.9
Hund14430 Selenicereus undatus HOM05D004955 ORTHO05D005965 1.7e-217 759.6 569 69.8
MD16G1269200 Malus domestica HOM05D004955 ORTHO05D005965 3.7e-217 758.4 563 69.4
HanXRQChr14g0455871 Helianthus annuus HOM05D004955 ORTHO05D005965 1.1e-216 756.9 538 71.7
Sed0006321 Sechium edule HOM05D004955 ORTHO05D005965 4.6e-215 751.5 557 70.4
AUR62007230 Chenopodium quinoa HOM05D004955 ORTHO05D005965 6.6e-214 747.7 556 69.2
CANSAT80G1132 Cannabis sativa HOM05D004955 ORTHO05D005965 1.5e-213 746.5 558 70.1
AUR62018770 Chenopodium quinoa HOM05D004955 ORTHO05D005965 1.9e-213 746.1 556 68.9
MELO3C015301.2 Cucumis melo HOM05D004955 ORTHO05D005965 4.3e-213 745.0 558 68.5
Lsat_1_v5_gn_6_66461 Lactuca sativa HOM05D004955 ORTHO05D005965 5.6e-213 744.6 560 68.6
Nitab4.5_0006693g0050 Nicotiana tabacum HOM05D004955 ORTHO05D005965 5.6e-213 744.6 513 74.7
Manes.15G172800 Manihot esculenta HOM05D004955 ORTHO05D005965 3.6e-212 741.9 507 73.0
Actinidia25945 Actinidia chinensis HOM05D004955 ORTHO05D005965 4.7e-212 741.5 557 69.1
MBI04_g29834_MAGBIO Magnolia biondii HOM05D004955 ORTHO05D005965 4.0e-211 738.4 563 69.6
THA.LOC104814429 Tarenaya hassleriana HOM05D004955 ORTHO05D005965 4.0e-211 738.4 560 67.7
Aa31LG9G15390 Aethionema arabicum HOM05D004955 ORTHO05D005965 9.9e-210 733.8 565 67.6
Haze_07894 Corylus avellana HOM05D004955 ORTHO05D005965 1.4e-208 729.9 557 68.4
AUR62001104 Chenopodium quinoa HOM05D004955 ORTHO05D005965 2.1e-207 726.1 557 67.9
Lalb_Chr16g0379231 Lupinus albus HOM05D004955 ORTHO05D005965 2.7e-207 725.7 495 74.3
ECA233G2813 Erigeron canadensis HOM05D004955 ORTHO05D005965 3.5e-207 725.3 555 66.7
CSS0006893 Camellia sinensis var. sinensis HOM05D004955 ORTHO05D005965 2.3e-206 722.6 493 74.6
CARHR195050 Cardamine hirsuta HOM05D004955 ORTHO05D005965 3.0e-206 722.2 560 67.7
Carub.0006s1636 Capsella rubella HOM05D004955 ORTHO05D005965 1.1e-205 720.3 562 67.1
AT5G18070 Arabidopsis thaliana HOM05D004955 ORTHO05D005965 2.5e-205 719.2 560 66.6
HPP92_017500 Vanilla planifolia HOM05D004955 ORTHO05D005965 5.6e-205 718.0 558 64.7
ATR0829G014 Amborella trichopoda HOM05D004955 ORTHO05D005965 1.2e-204 716.8 560 65.5
AL6G29260 Arabidopsis lyrata HOM05D004955 ORTHO05D005965 1.8e-203 713.0 559 66.7
PGSC0003DMG400024224 Solanum tuberosum HOM05D004955 ORTHO05D005965 1.8e-203 713.0 494 74.3
Thhalv10013080m.g Eutrema salsugineum HOM05D004955 ORTHO05D005965 2.6e-202 709.1 561 65.8
BraA10t44206Z Brassica rapa HOM05D004955 ORTHO05D005965 5.4e-200 701.4 558 64.9
SGA_v2.0_scaffold18G08384 Striga asiatica HOM05D004955 ORTHO05D005965 9.3e-200 700.7 495 72.1
A10p21440 Brassica napus HOM05D004955 ORTHO05D005965 1.2e-199 700.3 559 65.3
Sp6g26230 Schrenkiella parvula HOM05D004955 ORTHO05D005965 6.0e-199 698.0 561 65.2
ClCG03G017340 Citrullus lanatus HOM05D004955 ORTHO05D005965 7.8e-199 697.6 557 64.8
BolC9t58736H Brassica oleracea HOM05D004955 ORTHO05D005965 2.3e-198 696.0 558 64.7
BcaC04g18728 Brassica carinata HOM05D004955 ORTHO05D005965 5.1e-198 694.9 558 64.3
C09p58920 Brassica napus HOM05D004955 ORTHO05D005965 1.5e-197 693.3 558 64.2
C03p10070 Brassica napus HOM05D004955 ORTHO05D005965 4.9e-193 678.3 558 63.3
A03p08630 Brassica napus HOM05D004955 ORTHO05D005965 1.6e-191 673.3 557 63.4
unitig_21.g20378 Utricularia gibba HOM05D004955 ORTHO05D005965 4.6e-191 671.8 543 65.0
BraA03t10187Z Brassica rapa HOM05D004955 ORTHO05D005965 3.0e-190 669.1 558 62.5
BcaB01g05173 Brassica carinata HOM05D004955 ORTHO05D005965 5.1e-190 668.3 559 62.4
BolC3t13493H Brassica oleracea HOM05D004955 ORTHO05D005965 5.1e-190 668.3 559 62.4
Zm00001eb119880 Zea mays HOM05D004955 ORTHO05D005965 4.3e-189 665.2 551 62.6
SEGI_00537 Sequoiadendron giganteum HOM05D004955 ORTHO05D005965 9.0e-187 657.5 551 61.3
Os07g0195400 Oryza sativa ssp. japonica HOM05D004955 ORTHO05D005965 9.9e-186 654.1 537 61.5
BcaB08g36711 Brassica carinata HOM05D004955 ORTHO05D005965 1.4e-168 597.0 561 58.3
Haze_08303 Corylus avellana HOM05D004955 ORTHO05D005965 2.5e-168 596.3 423 72.3
SHI01417 Sapria himalayana HOM05D004955 ORTHO05D005965 6.9e-163 578.2 441 67.3
Pp3c15_140 Physcomitrium patens HOM05D004955 ORTHO05D005965 1.0e-161 574.3 559 54.9
Haze_08299 Corylus avellana HOM05D004955 ORTHO05D005965 5.5e-160 568.5 509 60.1
SGA_v2.0_scaffold157G37418 Striga asiatica HOM05D004955 ORTHO05D005965 8.2e-156 554.7 454 64.3
AagrBONN_evm.TU.Sc2ySwM_362.507 Anthoceros agrestis HOM05D004955 ORTHO05D005965 2.9e-153 546.2 558 53.6
Mapoly0074s0077 Marchantia polymorpha HOM05D004955 ORTHO05D005965 3.8e-153 545.8 564 52.8
Dinv25184 Davidia involucrata HOM05D004955 ORTHO05D005965 8.5e-153 544.7 396 72.2
CBR_g36832 Chara braunii HOM05D004955 ORTHO05D005965 3.0e-150 536.2 571 51.7
SMO174G0171 Selaginella moellendorffii HOM05D004955 ORTHO05D005965 3.3e-149 532.7 539 54.2
CDE08G0647 Ceratophyllum demersum HOM05D004955 ORTHO05D005965 3.0e-142 509.6 406 63.8
Atru.chr6.1775 Acer truncatum HOM05D004955 ORTHO05D005965 4.0e-142 509.2 358 73.7
Glyma.01G201400 Glycine max HOM05D004955 ORTHO05D005965 8.0e-119 431.8 295 75.3
PRCOL_00000375 Prasinoderma coloniale HOM05D004955 ORTHO05D005965 8.9e-118 428.3 542 48.2
Haze_08304 Corylus avellana HOM05D004955 ORTHO05D005965 2.9e-116 423.3 407 57.2
TPR.G6765 Trifolium pratense HOM05D004955 ORTHO05D005965 8.3e-108 395.2 568 45.1
MCO08G085 Micromonas commoda HOM05D004955 ORTHO05D005965 1.6e-106 391.0 572 41.4
Nn3g19414 Nelumbo nucifera HOM05D004955 ORTHO05D005965 1.5e-104 384.4 281 70.8
Cre08.g379700 Chlamydomonas reinhardtii HOM05D004955 ORTHO05D005965 4.7e-103 379.4 545 43.3
Glyma.16G093333 Glycine max HOM05D004955 ORTHO05D005965 1.1e-78 298.5 201 73.6
Actinidia03393 Actinidia chinensis HOM05D004955 ORTHO05D005965 7.6e-77 292.4 488 41.4
MD09G1284100 Malus domestica HOM05D004955 ORTHO05D005965 5.7e-56 223.0 378 42.1
Glyma.16G093267 Glycine max HOM05D004955 ORTHO05D005965 3.9e-49 200.3 142 71.8
Haze_26496 Corylus avellana HOM05D004955 ORTHO05D005965 3.3e-48 197.2 287 41.8
Glyma.01G201300 Glycine max HOM05D004955 ORTHO05D005965 3.4e-45 187.2 142 69.0
BcaB01g01790 Brassica carinata HOM05D004955 ORTHO05D005965 4.4e-40 170.2 147 58.5
SEGI_27182 Sequoiadendron giganteum HOM05D004955 ORTHO05D005965 2.2e-39 167.9 292 37.0
Cc05_g03290 Coffea canephora HOM05D004955 ORTHO05D005965 2.4e-38 164.5 110 70.9
Haze_08302 Corylus avellana HOM05D004955 ORTHO05D005965 5.9e-37 159.8 192 50.5
BcaB01g06395 Brassica carinata HOM05D004955 ORTHO05D005965 2.2e-31 141.4 101 69.3
SHI01420 Sapria himalayana HOM05D004955 ORTHO05D000023 2.8e-31 141.0 114 58.8
vmacro21667 Vaccinium macrocarpon HOM05D004955 ORTHO05D005965 1.4e-30 138.7 88 78.4
SEGI_19301 Sequoiadendron giganteum HOM05D005396 ORTHO05D006400 1.3e-23 115.5 153 45.1
CARHR185470 Cardamine hirsuta HOM05D004955 ORTHO05D005965 1.6e-21 108.6 85 63.5
Glyma.16G093100 Glycine max HOM05D004955 ORTHO05D005965 5.0e-20 103.6 77 64.9
ATR0149G020 Amborella trichopoda HOM05D004955 ORTHO05D005965 2.1e-18 98.2 87 56.3
Haze_08300 Corylus avellana HOM05D004955 ORTHO05D005965 4.8e-15 87.0 86 57.0
SEGI_05540 Sequoiadendron giganteum HOM05D004955 ORTHO05D005965 4.8e-15 87.0 73 58.9
Ah.04g153990 Amaranthus hybridus HOM05D004955 ORTHO05D005965 5.4e-14 83.6 203 34.0


User provided reference genes

Program Settings