Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_005581 Daucus carota HOM05D006148 ORTHO05D007955 4.2e-70 268.1 153 100.0
DCAR_008334 Daucus carota HOM05D006148 ORTHO05D007955 4.5e-48 194.9 139 77.7
MSTRG.9371 Avicennia marina HOM05D006148 ORTHO05D007955 7.7e-48 194.1 141 70.2
Oeu040676.1 Olea europaea HOM05D006148 ORTHO05D007955 6.5e-47 191.0 144 69.4
Dinv21692 Davidia involucrata HOM05D006148 ORTHO05D007955 2.5e-46 189.1 144 69.4
Migut.I00620 Erythranthe guttata HOM05D006148 ORTHO05D007955 5.5e-46 188.0 148 66.2
Actinidia10861 Actinidia chinensis HOM05D006148 ORTHO05D007955 7.2e-46 187.6 150 67.3
Aqoxy7G03487 Aquilegia oxysepala HOM05D006148 ORTHO05D007955 9.4e-46 187.2 144 70.8
Ciclev10022620m.g Citrus clementina HOM05D006148 ORTHO05D007955 9.4e-46 187.2 146 68.5
CSS0033428 Camellia sinensis var. sinensis HOM05D006148 ORTHO05D007955 1.2e-45 186.8 144 71.5
Hma1.2p1_0840F.1_g226570 Hydrangea macrophylla HOM05D006148 ORTHO05D007955 1.2e-45 186.8 152 66.4
Eucgr.D02128 Eucalyptus grandis HOM05D006148 ORTHO05D007955 4.7e-45 184.9 144 69.4
Cc02_g08620 Coffea canephora HOM05D006148 ORTHO05D007955 1.0e-44 183.7 147 66.0
ClCG09G012770 Citrullus lanatus HOM05D006148 ORTHO05D007955 1.8e-44 183.0 148 66.9
vmacro14126 Vaccinium macrocarpon HOM05D006148 ORTHO05D007955 1.8e-44 183.0 134 71.6
SGA_v2.0_scaffold40G15681 Striga asiatica HOM05D006148 ORTHO05D007955 4.0e-44 181.8 150 66.0
Lj3A721T48 Lonicera japonica HOM05D006148 ORTHO05D007955 5.2e-44 181.4 137 72.3
Nitab4.5_0003456g0030 Nicotiana tabacum HOM05D006148 ORTHO05D007955 5.2e-44 181.4 144 68.1
Rhsim07G0118900 Rhododendron simsii HOM05D006148 ORTHO05D007955 5.2e-44 181.4 155 65.8
TWI15G0129 Tripterygium wilfordii HOM05D006148 ORTHO05D007955 5.2e-44 181.4 144 66.7
Nitab4.5_0000506g0080 Nicotiana tabacum HOM05D006148 ORTHO05D007955 1.2e-43 180.3 144 67.4
Oeu017209.1 Olea europaea HOM05D006148 ORTHO05D007955 1.2e-43 180.3 144 67.4
SGA_v2.0_scaffold377G50308 Striga asiatica HOM05D006148 ORTHO05D007955 1.2e-43 180.3 150 66.0
unitig_46.g17987 Utricularia gibba HOM05D006148 ORTHO05D007955 1.2e-43 180.3 152 66.4
Peaxi162Scf00190g00088 Petunia axillaris HOM05D006148 ORTHO05D007955 1.5e-43 179.9 144 67.4
TAR375G0576 Trochodendron aralioides HOM05D006148 ORTHO05D007955 2.0e-43 179.5 144 67.4
Atru.chr9.1220 Acer truncatum HOM05D006148 ORTHO05D007955 2.6e-43 179.1 151 66.2
CANSAT21G1845 Cannabis sativa HOM05D006148 ORTHO05D007955 9.8e-43 177.2 153 63.4
Nitab4.5_0007628g0010 Nicotiana tabacum HOM05D006148 ORTHO05D007955 9.8e-43 177.2 153 64.1
Manes.02G044300 Manihot esculenta HOM05D006148 ORTHO05D007955 1.3e-42 176.8 144 65.3
unitig_747.g21320 Utricularia gibba HOM05D006148 ORTHO05D007955 1.7e-42 176.4 140 67.1
CSS0030063 Camellia sinensis var. sinensis HOM05D006148 ORTHO05D007955 2.2e-42 176.0 147 65.3
CsaV3_3G049830 Cucumis sativus L. HOM05D006148 ORTHO05D007955 2.2e-42 176.0 138 68.1
CiPaw.12G047200 Carya illinoinensis HOM05D006148 ORTHO05D007955 2.8e-42 175.6 138 65.2
Gohir.A12G213600 Gossypium hirsutum HOM05D006148 ORTHO05D007955 2.8e-42 175.6 144 63.2
PGR031G0321 Punica granatum HOM05D006148 ORTHO05D007955 2.8e-42 175.6 148 62.8
Prupe.5G058400 Prunus persica HOM05D006148 ORTHO05D007955 3.7e-42 175.3 146 65.1
Sed0014825 Sechium edule HOM05D006148 ORTHO05D007955 4.9e-42 174.9 148 63.5
Thecc.03G242700 Theobroma cacao HOM05D006148 ORTHO05D007955 4.9e-42 174.9 123 74.0
Duzib068G0643 Durio zibethinus HOM05D006148 ORTHO05D007955 6.3e-42 174.5 144 63.2
Gohir.D12G216200 Gossypium hirsutum HOM05D006148 ORTHO05D007955 6.3e-42 174.5 144 63.2
Gorai.008G231600 Gossypium raimondii HOM05D006148 ORTHO05D007955 6.3e-42 174.5 144 63.2
Solyc08g077970.2 Solanum lycopersicum HOM05D006148 ORTHO05D007955 6.3e-42 174.5 144 64.6
Potri.012G038600 Populus trichocarpa HOM05D006148 ORTHO05D007955 1.1e-41 173.7 133 68.4
PGSC0003DMG400026249 Solanum tuberosum HOM05D006148 ORTHO05D007955 1.1e-41 173.7 144 63.9
MD06G1048200 Malus domestica HOM05D006148 ORTHO05D007955 1.8e-41 172.9 152 63.8
PGSC0003DMG400026577 Solanum tuberosum HOM05D006148 ORTHO05D007955 1.8e-41 172.9 144 63.9
MELO3C003333.2 Cucumis melo HOM05D006148 ORTHO05D007955 3.1e-41 172.2 125 72.0
MD04G1051900 Malus domestica HOM05D006148 ORTHO05D007955 3.1e-41 172.2 150 64.7
Solyc06g060920.3 Solanum lycopersicum HOM05D006148 ORTHO05D007955 3.1e-41 172.2 144 63.9
Sopen08g026480 Solanum pennellii HOM05D006148 ORTHO05D007955 3.1e-41 172.2 144 63.9
MBI15_g47175_MAGBIO Magnolia biondii HOM05D006148 ORTHO05D007955 4.1e-41 171.8 128 70.3
Sopen06g021070 Solanum pennellii HOM05D006148 ORTHO05D007955 4.1e-41 171.8 144 63.9
Rhsim07G0118700 Rhododendron simsii HOM05D006148 ORTHO05D007955 5.4e-41 171.4 149 64.4
CAN.G761.17 Capsicum annuum HOM05D006148 ORTHO05D007955 1.6e-40 169.9 144 62.5
Sed0021147 Sechium edule HOM05D006148 ORTHO05D007955 1.6e-40 169.9 148 61.5
RcHm_v2.0_Chr7g0205301 Rosa chinensis HOM05D006148 ORTHO05D007955 2.7e-40 169.1 147 63.3
Lj2A228G47 Lonicera japonica HOM05D006148 ORTHO05D007955 3.5e-40 168.7 112 78.6
SalBow1G4160 Salvia bowleyana HOM05D006148 ORTHO05D007955 5.0e-39 164.9 123 70.7
Ca_20510_v3 Cicer arietinum L. HOM05D006148 ORTHO05D007955 1.9e-38 162.9 151 58.9
Phvul.010G018500 Phaseolus vulgaris HOM05D006148 ORTHO05D007955 1.9e-38 162.9 141 61.7
Sabra12G0027000 Salix brachista HOM05D006148 ORTHO05D007955 3.3e-38 162.2 144 62.5
FvH4_5g20230 Fragaria vesca HOM05D006148 ORTHO05D007955 5.6e-38 161.4 147 59.9
Sc22g0005540 Simmondsia chinensis HOM05D006148 ORTHO05D007955 7.3e-38 161.0 144 62.5
VMungo0331G0425 Vigna mungo HOM05D006148 ORTHO05D007955 9.5e-38 160.6 121 68.6
FAN13G2154 Fragaria x ananassa HOM05D006148 ORTHO05D007955 1.6e-37 159.8 147 59.2
FAN13G3051 Fragaria x ananassa HOM05D006148 ORTHO05D007955 1.6e-37 159.8 147 59.2
Glyma.16G092500 Glycine max HOM05D006148 ORTHO05D007955 1.6e-37 159.8 144 60.4
Lsat_1_v5_gn_3_16181 Lactuca sativa HOM05D006148 ORTHO05D007955 1.6e-37 159.8 144 57.6
COL.COLO4_07508 Corchorus olitorius HOM05D006148 ORTHO05D007955 2.1e-37 159.5 144 59.7
ECA248G1075 Erigeron canadensis HOM05D006148 ORTHO05D007955 2.8e-37 159.1 144 57.6
Psat5g091640 Pisum sativum HOM05D006148 ORTHO05D007955 4.7e-37 158.3 134 61.9
Medtr3g086600 Medicago truncatula HOM05D006148 ORTHO05D007955 1.8e-36 156.4 140 59.3
Lalb_Chr18g0047251 Lupinus albus HOM05D006148 ORTHO05D007955 6.8e-36 154.5 133 63.2
Aa31LG2G13090 Aethionema arabicum HOM05D006148 ORTHO05D007955 8.9e-36 154.1 160 54.4
Lj3g0001636 Lotus japonicus HOM05D006148 ORTHO05D007955 8.9e-36 154.1 124 64.5
Lalb_Chr15g0078661 Lupinus albus HOM05D006148 ORTHO05D007955 8.9e-36 154.1 138 58.7
TPR.G30538 Trifolium pratense HOM05D006148 ORTHO05D007955 8.9e-36 154.1 140 59.3
Carub.0007s2441 Capsella rubella HOM05D006148 ORTHO05D007955 1.2e-35 153.7 145 56.6
CDE04G1348 Ceratophyllum demersum HOM05D006148 ORTHO05D007955 1.2e-35 153.7 147 58.5
Glyma.09G078400 Glycine max HOM05D006148 ORTHO05D007955 1.2e-35 153.7 113 68.1
HanXRQChr17g0550021 Helianthus annuus HOM05D006148 ORTHO05D007955 1.5e-35 153.3 125 62.4
THA.LOC104812735 Tarenaya hassleriana HOM05D006148 ORTHO05D007955 1.7e-34 149.8 151 55.0
A01p20300 Brassica napus HOM05D006148 ORTHO05D007955 2.9e-34 149.1 142 57.0
FAN04G0567 Fragaria x ananassa HOM05D006148 ORTHO05D007955 3.7e-34 148.7 169 52.1
EL10Ac5g12797 Beta vulgaris HOM05D006148 ORTHO05D007955 6.4e-34 147.9 137 59.9
PSO541G2943 Papaver somniferum HOM05D006148 ORTHO05D007955 6.4e-34 147.9 124 61.3
BcaC09g50434 Brassica carinata HOM05D006148 ORTHO05D007955 8.3e-34 147.5 152 53.9
C01p25460 Brassica napus HOM05D006148 ORTHO05D007955 8.3e-34 147.5 152 53.3
BraA01t01958Z Brassica rapa HOM05D006148 ORTHO05D007955 8.3e-34 147.5 152 53.9
HPP92_005702 Vanilla planifolia HOM05D006148 ORTHO05D007955 8.3e-34 147.5 145 58.6
AUR62017180 Chenopodium quinoa HOM05D006148 ORTHO05D007955 1.1e-33 147.1 133 59.4
BolC1t02497H Brassica oleracea HOM05D006148 ORTHO05D007955 1.4e-33 146.7 152 53.9
arahy.Tifrunner.gnm1.ann1.0GR2GF Arachis hypogaea HOM05D006148 ORTHO05D007955 1.8e-33 146.4 134 54.5
arahy.Tifrunner.gnm1.ann1.L2DS42 Arachis hypogaea HOM05D006148 ORTHO05D007955 1.8e-33 146.4 134 54.5
Hund11457 Selenicereus undatus HOM05D006148 ORTHO05D007955 2.4e-33 146.0 135 60.0
THA.LOC104814463 Tarenaya hassleriana HOM05D006148 ORTHO05D007955 2.4e-33 146.0 149 53.7
BcaNung00135 Brassica carinata HOM05D006148 ORTHO05D007955 3.2e-33 145.6 155 52.9
Haze_05448 Corylus avellana HOM05D006148 ORTHO05D007955 3.2e-33 145.6 214 44.4
FAN08G3523 Fragaria x ananassa HOM05D006148 ORTHO05D007955 4.1e-33 145.2 178 49.4
THA.LOC104807925 Tarenaya hassleriana HOM05D006148 ORTHO05D007955 4.1e-33 145.2 126 59.5
Os04g0431800 Oryza sativa ssp. japonica HOM05D006148 ORTHO05D007955 9.2e-33 144.1 151 53.0
Sp7g17180 Schrenkiella parvula HOM05D006148 ORTHO05D007955 1.6e-32 143.3 155 51.6
ATR0767G234 Amborella trichopoda HOM05D006148 ORTHO05D007955 2.7e-32 142.5 135 58.5
CARHR223570 Cardamine hirsuta HOM05D006148 ORTHO05D007955 5.0e-31 138.3 153 51.6
Os02g0494600 Oryza sativa ssp. japonica HOM05D006148 ORTHO05D007955 6.6e-31 137.9 149 53.0
PSO675G9254 Papaver somniferum HOM05D006148 ORTHO05D007955 1.5e-30 136.7 124 58.9
AT4G17010 Arabidopsis thaliana HOM05D006148 ORTHO05D007955 4.3e-30 135.2 162 49.4
Thhalv10026445m.g Eutrema salsugineum HOM05D006148 ORTHO05D007955 1.8e-28 129.8 146 50.0
AL7G37710 Arabidopsis lyrata HOM05D006148 ORTHO05D007955 3.1e-28 129.0 155 49.0
Hma1.2p1_1008F.1_g247180 Hydrangea macrophylla HOM05D006148 ORTHO05D007955 1.2e-27 127.1 113 61.1
Nn1g00796 Nelumbo nucifera HOM05D006148 ORTHO05D007955 4.4e-27 125.2 149 52.3
QL12p009037 Quercus lobata HOM05D006148 ORTHO05D007955 1.7e-26 123.2 310 32.3
Zm00001eb422600 Zea mays HOM05D006148 ORTHO05D007955 1.4e-25 120.2 107 57.9
vmacro00048 Vaccinium macrocarpon HOM05D006148 ORTHO05D007955 9.2e-25 117.5 143 51.0
MBI06_g25325_MAGBIO Magnolia biondii HOM05D006148 ORTHO05D007955 8.6e-23 110.9 109 55.0
Lj2A721G5 Lonicera japonica HOM05D006148 ORTHO05D007955 9.5e-22 107.5 73 78.1
Cpa.g.sc1152.2 Carica papaya HOM05D006148 ORTHO05D007955 6.4e-18 94.7 76 65.8
SEGI_12345 Sequoiadendron giganteum HOM05D006148 ORTHO05D007955 1.4e-17 93.6 155 40.0
Ah.07g196390 Amaranthus hybridus HOM05D006148 ORTHO05D007955 7.1e-17 91.3 106 52.8
Nitab4.5_0000500g0150 Nicotiana tabacum HOM05D006148 ORTHO05D007955 7.3e-14 81.3 112 46.4
AUR62027260 Chenopodium quinoa HOM05D006148 ORTHO05D007955 9.5e-14 80.9 133 39.8
AUR62010708 Chenopodium quinoa HOM05D006148 ORTHO05D007955 1.2e-13 80.5 133 39.8
Oeu017208.1 Olea europaea HOM05D002196 ORTHO05D002565 5.8e-11 71.6 68 57.4
MBI15_g37973_MAGBIO Magnolia biondii HOM05D006148 ORTHO05D007955 8.6e-07 57.8 75 45.3
Hma1.2p1_0871F.1_g231040 Hydrangea macrophylla HOM05D006148 ORTHO05D007955 7.3e-06 54.7 58 50.0


User provided reference genes

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