Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_005549 Daucus carota HOM05D006007 ORTHO05D007518 4.1e-296 1020.8 567 100.0
GSVIVG01032902001 Vitis vinifera HOM05D006007 ORTHO05D007518 2.7e-146 523.1 606 53.0
TAR264G0002 Trochodendron aralioides HOM05D006007 ORTHO05D007518 1.3e-145 520.8 608 53.3
QL02p067640 Quercus lobata HOM05D006007 ORTHO05D007518 2.0e-141 506.9 627 51.2
Dinv34943 Davidia involucrata HOM05D006007 ORTHO05D007518 1.9e-139 500.4 465 60.2
CSS0026219 Camellia sinensis var. sinensis HOM05D006007 ORTHO05D007518 2.4e-139 500.0 603 52.6
CSS0007202 Camellia sinensis var. sinensis HOM05D006007 ORTHO05D007518 3.2e-139 499.6 603 52.9
Potri.017G093600 Populus trichocarpa HOM05D006007 ORTHO05D007518 6.2e-135 485.3 601 50.2
Cc07_g04190 Coffea canephora HOM05D006007 ORTHO05D007518 1.1e-134 484.6 600 51.0
FAN09G0451 Fragaria x ananassa HOM05D006007 ORTHO05D007518 5.3e-134 482.3 618 51.5
CiPaw.03G088800 Carya illinoinensis HOM05D006007 ORTHO05D007518 1.2e-133 481.1 612 50.5
RcHm_v2.0_Chr2g0165881 Rosa chinensis HOM05D006007 ORTHO05D007518 9.9e-133 478.0 614 50.2
FAN05G3222 Fragaria x ananassa HOM05D006007 ORTHO05D007518 1.7e-132 477.2 630 50.0
Nn4g23426 Nelumbo nucifera HOM05D006007 ORTHO05D007518 2.9e-132 476.5 607 51.9
Sabra17G0082500 Salix brachista HOM05D006007 ORTHO05D007518 2.9e-132 476.5 600 51.2
Cfa007665 Carpinus fangiana HOM05D006007 ORTHO05D007518 1.4e-131 474.2 616 49.7
Nitab4.5_0000212g0230 Nicotiana tabacum HOM05D006007 ORTHO05D007518 1.2e-130 471.1 592 51.5
FvH4_6g46910 Fragaria vesca HOM05D006007 ORTHO05D007518 2.7e-130 469.9 616 51.8
CANSAT64G1701 Cannabis sativa HOM05D006007 ORTHO05D007518 1.8e-129 467.2 622 49.5
Ciclev10011374m.g Citrus clementina HOM05D006007 ORTHO05D007518 5.1e-129 465.7 559 53.8
Manes.02G054700 Manihot esculenta HOM05D006007 ORTHO05D007518 6.7e-129 465.3 623 50.7
Atru.chr8.458 Acer truncatum HOM05D006007 ORTHO05D007518 2.5e-128 463.4 602 51.2
FAN02G0083 Fragaria x ananassa HOM05D006007 ORTHO05D007518 4.3e-128 462.6 630 50.8
Lj4A118G52 Lonicera japonica HOM05D006007 ORTHO05D007518 4.3e-128 462.6 593 51.3
Solyc02g066940.4 Solanum lycopersicum HOM05D006007 ORTHO05D007518 4.3e-128 462.6 592 52.2
ECA246G0757 Erigeron canadensis HOM05D006007 ORTHO05D007518 1.6e-127 460.7 565 52.9
MSTRG.23885 Avicennia marina HOM05D006007 ORTHO05D007518 2.8e-127 459.9 577 51.0
Duzib264G0491 Durio zibethinus HOM05D006007 ORTHO05D007518 3.1e-126 456.4 602 50.5
Gorai.007G082800 Gossypium raimondii HOM05D006007 ORTHO05D007518 3.1e-126 456.4 619 51.5
CAN.G398.20 Capsicum annuum HOM05D006007 ORTHO05D007518 6.9e-126 455.3 585 53.0
PGSC0003DMG400025145 Solanum tuberosum HOM05D006007 ORTHO05D007518 1.5e-125 454.1 592 51.4
TWI32G0586 Tripterygium wilfordii HOM05D006007 ORTHO05D007518 1.5e-125 454.1 587 51.1
Gohir.D11G077100 Gossypium hirsutum HOM05D006007 ORTHO05D007518 4.5e-125 452.6 618 51.1
FAN14G4567 Fragaria x ananassa HOM05D006007 ORTHO05D007518 5.8e-125 452.2 644 49.7
Gohir.A11G072800 Gossypium hirsutum HOM05D006007 ORTHO05D007518 6.5e-124 448.7 619 52.0
HanXRQChr17g0546081 Helianthus annuus HOM05D006007 ORTHO05D007518 1.1e-123 448.0 588 52.7
Thecc.04G095300 Theobroma cacao HOM05D006007 ORTHO05D007518 1.1e-123 448.0 597 49.6
Haze_14433 Corylus avellana HOM05D006007 ORTHO05D007518 2.1e-122 443.7 677 44.8
CiPaw.04G055900 Carya illinoinensis HOM05D006007 ORTHO05D007518 3.5e-122 443.0 467 55.2
THA.LOC104823889 Tarenaya hassleriana HOM05D006007 ORTHO05D007518 3.5e-122 443.0 613 49.4
PSO017G6380 Papaver somniferum HOM05D006007 ORTHO05D007518 7.9e-122 441.8 600 48.5
Phvul.008G033600 Phaseolus vulgaris HOM05D006007 ORTHO05D007518 7.9e-122 441.8 628 47.0
Glyma.18G266400 Glycine max HOM05D006007 ORTHO05D007518 1.3e-121 441.0 649 46.5
Peaxi162Scf00991g00329 Petunia axillaris HOM05D006007 ORTHO05D007518 6.7e-121 438.7 458 56.3
Medtr7g013700 Medicago truncatula HOM05D006007 ORTHO05D007518 2.5e-120 436.8 611 52.4
Oeu004412.3 Olea europaea HOM05D006007 ORTHO05D007518 1.8e-118 430.6 657 47.3
PSO478G1877 Papaver somniferum HOM05D006007 ORTHO05D007518 4.1e-118 429.5 595 48.1
Migut.H00628 Erythranthe guttata HOM05D006007 ORTHO05D007518 1.5e-117 427.6 444 57.2
Lsat_1_v5_gn_3_97780 Lactuca sativa HOM05D006007 ORTHO05D007518 2.6e-117 426.8 587 53.5
Lj1g0023913 Lotus japonicus HOM05D006007 ORTHO05D007518 5.8e-117 425.6 641 47.1
Sopen02g016130 Solanum pennellii HOM05D006007 ORTHO05D007518 1.7e-116 424.1 456 55.0
vmacro05632 Vaccinium macrocarpon HOM05D006007 ORTHO05D007518 8.4e-116 421.8 611 46.8
Lalb_Chr17g0337001 Lupinus albus HOM05D006007 ORTHO05D007518 1.1e-115 421.4 637 47.9
Aqoxy3G03693 Aquilegia oxysepala HOM05D006007 ORTHO05D007518 1.4e-115 421.0 597 48.9
CDE02G4269 Ceratophyllum demersum HOM05D006007 ORTHO05D007518 1.4e-115 421.0 582 47.3
Hund15552 Selenicereus undatus HOM05D006007 ORTHO05D007518 4.6e-114 416.0 659 44.9
Prupe.3G255200 Prunus persica HOM05D006007 ORTHO05D007518 7.9e-114 415.2 481 53.8
Ca_04352_v3 Cicer arietinum L. HOM05D006007 ORTHO05D007518 5.1e-113 412.5 668 45.1
Thhalv10003901m.g Eutrema salsugineum HOM05D006007 ORTHO05D007518 8.7e-113 411.8 559 49.2
SalBow1G7079 Salvia bowleyana HOM05D006007 ORTHO05D007518 9.7e-112 408.3 439 55.6
Rhsim10G0048800 Rhododendron simsii HOM05D006007 ORTHO05D007518 1.6e-111 407.5 586 46.8
HPP92_007829 Vanilla planifolia HOM05D006007 ORTHO05D007518 1.6e-111 407.5 625 44.5
FAN05G2596 Fragaria x ananassa HOM05D006007 ORTHO05D007518 2.8e-111 406.8 474 54.0
EL10Ac2g03139 Beta vulgaris HOM05D006007 ORTHO05D007518 3.7e-111 406.4 615 45.0
Glyma.08G245100 Glycine max HOM05D006007 ORTHO05D007518 6.9e-110 402.1 507 50.9
Sp2g17990 Schrenkiella parvula HOM05D006007 ORTHO05D007518 1.5e-109 401.0 571 49.2
A02p36640 Brassica napus HOM05D006007 ORTHO05D007518 2.6e-109 400.2 559 49.6
AUR62018183 Chenopodium quinoa HOM05D006007 ORTHO05D007518 5.9e-109 399.1 438 53.9
Sed0005820 Sechium edule HOM05D006007 ORTHO05D007518 7.7e-109 398.7 622 44.9
ATR0177G014 Amborella trichopoda HOM05D006007 ORTHO05D007518 1.0e-108 398.3 625 44.8
Ah.10g032260 Amaranthus hybridus HOM05D006007 ORTHO05D007518 2.9e-108 396.7 507 52.5
BraA02t08659Z Brassica rapa HOM05D006007 ORTHO05D007518 6.5e-108 395.6 549 49.4
unitig_52.g17640 Utricularia gibba HOM05D006007 ORTHO05D007518 8.5e-108 395.2 550 48.0
arahy.Tifrunner.gnm1.ann1.EQE0CJ Arachis hypogaea HOM05D006007 ORTHO05D007518 3.2e-107 393.3 735 40.0
arahy.Tifrunner.gnm1.ann1.J3LTHX Arachis hypogaea HOM05D006007 ORTHO05D007518 3.2e-107 393.3 735 40.0
Carub.0005s0814 Capsella rubella HOM05D006007 ORTHO05D007518 3.2e-107 393.3 574 47.9
COL.COLO4_07027 Corchorus olitorius HOM05D006007 ORTHO05D007518 1.2e-106 391.3 466 53.9
BcaB07g30079 Brassica carinata HOM05D006007 ORTHO05D007518 7.9e-106 388.7 556 49.5
MELO3C022635.2 Cucumis melo HOM05D006007 ORTHO05D007518 7.9e-106 388.7 652 42.8
Aa31LG2G3900 Aethionema arabicum HOM05D006007 ORTHO05D007518 8.8e-105 385.2 577 48.0
C02p55600 Brassica napus HOM05D006007 ORTHO05D007518 5.7e-104 382.5 555 49.2
BolC2t11616H Brassica oleracea HOM05D006007 ORTHO05D007518 5.7e-104 382.5 555 49.2
Zm00001eb008620 Zea mays HOM05D006007 ORTHO05D007518 1.7e-103 380.9 648 41.7
BcaC03g17580 Brassica carinata HOM05D006007 ORTHO05D007518 2.2e-103 380.6 555 49.2
Cpa.g.sc14.172 Carica papaya HOM05D006007 ORTHO05D007518 2.2e-103 380.6 394 57.1
AT3G29390 Arabidopsis thaliana HOM05D006007 ORTHO05D007518 2.8e-103 380.2 452 52.9
Nitab4.5_0010627g0030 Nicotiana tabacum HOM05D006007 ORTHO05D007518 8.2e-103 378.6 593 46.9
Ca_30479_v3 Cicer arietinum L. HOM05D006007 ORTHO05D007518 1.1e-102 378.3 513 47.8
AL5G19590 Arabidopsis lyrata HOM05D006007 ORTHO05D007518 1.4e-102 377.9 579 46.8
ClCG07G016350 Citrullus lanatus HOM05D006007 ORTHO05D007518 3.9e-97 359.8 760 38.4
PGR004G1158 Punica granatum HOM05D006007 ORTHO05D007518 2.6e-96 357.1 531 46.9
CsaV3_4G009190 Cucumis sativus L. HOM05D006007 ORTHO05D007518 7.7e-93 345.5 485 48.2
Psat3g201920 Pisum sativum HOM05D006007 ORTHO05D007518 7.2e-91 339.0 403 56.8
AUR62038668 Chenopodium quinoa HOM05D006007 ORTHO05D007518 3.0e-89 333.6 410 51.5
SEGI_40404 Sequoiadendron giganteum HOM05D006007 ORTHO05D007518 4.7e-82 309.7 601 38.9
TPR.G33475 Trifolium pratense HOM05D006007 ORTHO05D007518 4.5e-77 293.1 234 67.5
Hma1.2p1_0481F.1_g162140 Hydrangea macrophylla HOM05D006007 ORTHO05D007518 3.8e-76 290.0 404 50.2
Hma1.2p1_0481F.1_g162150 Hydrangea macrophylla HOM05D006007 ORTHO05D007518 3.8e-76 290.0 404 50.2
MBI19_g00631_MAGBIO Magnolia biondii HOM05D006007 ORTHO05D007518 3.2e-75 287.0 256 61.7
Mapoly0218s0012 Marchantia polymorpha HOM05D006007 ORTHO05D007518 5.2e-73 279.6 598 35.1
HPP92_007749 Vanilla planifolia HOM05D006007 ORTHO05D007518 2.4e-70 270.8 274 56.2
Eucgr.J01380 Eucalyptus grandis HOM05D006007 ORTHO05D007518 2.3e-68 264.2 432 43.8
Pp3c3_22820 Physcomitrium patens HOM05D006007 ORTHO05D007518 4.4e-64 250.0 303 47.2
MD09G1066400 Malus domestica HOM05D006007 ORTHO05D007518 1.1e-59 235.3 380 44.7
Sc10g0004660 Simmondsia chinensis HOM05D006007 ORTHO05D007518 8.0e-58 229.2 220 60.5
CBR_g19543 Chara braunii HOM05D006007 ORTHO05D007518 3.2e-54 217.2 336 42.0
MD09G1066300 Malus domestica HOM05D006007 ORTHO05D007518 2.0e-53 214.5 225 55.1
Sc10g0004670 Simmondsia chinensis HOM05D006007 ORTHO05D007518 7.3e-51 206.1 380 39.7
CDE05G1269 Ceratophyllum demersum HOM05D006007 ORTHO05D007518 2.6e-48 197.6 218 53.2
MBI19_g00630_MAGBIO Magnolia biondii HOM05D006007 ORTHO05D007518 2.1e-45 188.0 389 37.8
Os03g0213900 Oryza sativa ssp. japonica HOM05D006007 ORTHO05D007518 5.4e-38 163.3 149 60.4
Hma1.2p1_0481F.1_g162130 Hydrangea macrophylla HOM05D006007 ORTHO05D007518 3.0e-36 157.5 152 58.6
SEGI_00365 Sequoiadendron giganteum HOM05D006007 ORTHO05D007518 1.9e-35 154.8 129 60.5
Oeu051018.1 Olea europaea HOM05D006007 ORTHO05D007518 7.3e-35 152.9 227 46.7
BraA09t36042Z Brassica rapa HOM05D006007 ORTHO05D007518 4.2e-30 137.1 90 75.6
SHI25685 Sapria himalayana HOM05D006007 ORTHO05D007518 3.5e-29 134.0 136 51.5
A09p04060 Brassica napus HOM05D006007 ORTHO05D010543 1.3e-28 132.1 90 73.3
SHI25684 Sapria himalayana HOM05D006007 ORTHO05D007518 2.8e-26 124.4 193 43.0
CDE05G3437 Ceratophyllum demersum HOM05D006007 ORTHO05D007518 1.2e-24 119.0 246 37.8
Cre09.g389900 Chlamydomonas reinhardtii HOM05D006007 ORTHO05D007518 5.1e-20 103.6 343 28.0
BcaC03g17562 Brassica carinata HOM05D006007 ORTHO05D007518 1.5e-19 102.1 271 35.1
MBI15_g14467_MAGBIO Magnolia biondii HOM05D003623 ORTHO05D007518 1.3e-15 89.0 114 48.2
BolC2t11584H Brassica oleracea HOM05D006007 ORTHO05D007518 3.9e-12 77.4 70 61.4
HPP92_007750 Vanilla planifolia HOM05D006007 ORTHO05D007518 2.8e-10 71.2 100 46.0
CARHR153030 Cardamine hirsuta HOM05D006007 ORTHO05D007518 1.8e-09 68.6 68 52.9
Hma1.2p1_2482F.1_g322990 Hydrangea macrophylla HOM05D003145 ORTHO05D003586 4.2e-06 57.4 151 23.8


User provided reference genes

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