Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_005529 Daucus carota HOM05D002211 ORTHO05D002206 2.0e-115 419.1 207 100.0
Sabra13G0047200 Salix brachista HOM05D002211 ORTHO05D002206 9.9e-14 81.3 159 37.1
Dinv10852 Davidia involucrata HOM05D002211 ORTHO05D002206 1.3e-13 80.9 174 36.8
Glyma.03G253400 Glycine max HOM05D002211 ORTHO05D002206 1.3e-13 80.9 149 38.3
Medtr7g116610 Medicago truncatula HOM05D002211 ORTHO05D002206 1.3e-13 80.9 164 37.8
Prupe.6G355600 Prunus persica HOM05D002211 ORTHO05D002206 4.9e-13 79.0 155 39.4
CsaV3_2G010180 Cucumis sativus L. HOM05D002211 ORTHO05D002206 1.1e-12 77.8 182 34.6
Gorai.007G268900 Gossypium raimondii HOM05D002211 ORTHO05D002206 1.1e-12 77.8 171 40.9
Eucgr.B02173 Eucalyptus grandis HOM05D002211 ORTHO05D002206 1.4e-12 77.4 178 34.3
Phvul.006G108100 Phaseolus vulgaris HOM05D002211 ORTHO05D002206 1.4e-12 77.4 174 36.2
Sed0010531 Sechium edule HOM05D002211 ORTHO05D002206 1.4e-12 77.4 165 36.4
Ca_09451_v3 Cicer arietinum L. HOM05D002211 ORTHO05D002206 1.9e-12 77.0 167 34.7
Manes.08G147100 Manihot esculenta HOM05D002211 ORTHO05D002206 1.9e-12 77.0 159 37.7
GSVIVG01026373001 Vitis vinifera HOM05D002211 ORTHO05D002206 1.9e-12 77.0 149 36.9
Gohir.D11G250800 Gossypium hirsutum HOM05D002211 ORTHO05D002206 2.4e-12 76.6 169 39.6
Manes.09G144900 Manihot esculenta HOM05D002211 ORTHO05D002206 4.2e-12 75.9 160 37.5
TPR.G4687 Trifolium pratense HOM05D002211 ORTHO05D002206 4.2e-12 75.9 166 36.1
Glyma.19G250900 Glycine max HOM05D002211 ORTHO05D002206 5.4e-12 75.5 167 34.1
Duzib128G1915 Durio zibethinus HOM05D002211 ORTHO05D002206 9.2e-12 74.7 166 37.3
VMungo0540G2450 Vigna mungo HOM05D002211 ORTHO05D002206 9.2e-12 74.7 166 36.7
MELO3C008671.2 Cucumis melo HOM05D002211 ORTHO05D002206 1.2e-11 74.3 182 34.1
Potri.019G029600 Populus trichocarpa HOM05D002211 ORTHO05D002206 1.6e-11 73.9 160 34.4
MSTRG.9225 Avicennia marina HOM05D002211 ORTHO05D002206 2.7e-11 73.2 161 35.4
CANSAT54G2545 Cannabis sativa HOM05D002211 ORTHO05D002206 2.7e-11 73.2 164 35.4
Oeu001241.1 Olea europaea HOM05D002211 ORTHO05D002206 2.7e-11 73.2 150 34.7
ATR0686G227 Amborella trichopoda HOM05D002211 ORTHO05D002206 3.5e-11 72.8 150 35.3
Cpa.g.sc51.66 Carica papaya HOM05D002211 ORTHO05D002206 3.5e-11 72.8 161 36.0
Lj1g0002409 Lotus japonicus HOM05D002211 ORTHO05D002206 3.5e-11 72.8 156 35.3
Peaxi162Scf00071g00139 Petunia axillaris HOM05D002211 ORTHO05D002206 3.5e-11 72.8 149 35.6
Potri.013G052600 Populus trichocarpa HOM05D002211 ORTHO05D002206 3.5e-11 72.8 172 36.0
RcHm_v2.0_Chr3g0448791 Rosa chinensis HOM05D002211 ORTHO05D002206 4.6e-11 72.4 157 35.7
Sabra19G0036300 Salix brachista HOM05D002211 ORTHO05D002206 4.6e-11 72.4 170 36.5
Sabra19G0039400 Salix brachista HOM05D002211 ORTHO05D002206 4.6e-11 72.4 170 36.5
Psat3g005600 Pisum sativum HOM05D002211 ORTHO05D002206 6.0e-11 72.0 175 35.4
COL.COLO4_20545 Corchorus olitorius HOM05D002211 ORTHO05D002206 1.0e-10 71.2 165 33.9
PGR142G0339 Punica granatum HOM05D002211 ORTHO05D002206 1.0e-10 71.2 167 34.7
CiPaw.07G075600 Carya illinoinensis HOM05D002211 ORTHO05D002206 1.3e-10 70.9 148 39.9
Duzib177G1183 Durio zibethinus HOM05D002211 ORTHO05D002206 1.3e-10 70.9 164 36.0
FAN05G2499 Fragaria x ananassa HOM05D002211 ORTHO05D002206 1.3e-10 70.9 171 36.3
SalBow1G6037 Salvia bowleyana HOM05D002211 ORTHO05D002206 1.3e-10 70.9 149 36.2
FAN05G1779 Fragaria x ananassa HOM05D002211 ORTHO05D002206 1.7e-10 70.5 171 35.1
vmacro10391 Vaccinium macrocarpon HOM05D002211 ORTHO05D002206 1.7e-10 70.5 172 34.3
Gohir.A11G241500 Gossypium hirsutum HOM05D002211 ORTHO05D002206 2.3e-10 70.1 162 38.3
MD12G1253400 Malus domestica HOM05D002211 ORTHO05D002206 2.3e-10 70.1 171 33.3
Rhsim09G0131800 Rhododendron simsii HOM05D002211 ORTHO05D002206 2.3e-10 70.1 163 33.7
MSTRG.8176 Avicennia marina HOM05D002211 ORTHO05D002206 3.0e-10 69.7 163 34.4
FvH4_6g01210 Fragaria vesca HOM05D002211 ORTHO05D002206 3.0e-10 69.7 171 36.3
FAN05G1484 Fragaria x ananassa HOM05D002211 ORTHO05D002206 3.0e-10 69.7 163 37.4
Gohir.D13G105700 Gossypium hirsutum HOM05D002211 ORTHO05D002206 3.0e-10 69.7 160 36.2
Nitab4.5_0004201g0020 Nicotiana tabacum HOM05D002211 ORTHO05D002206 3.0e-10 69.7 148 35.8
Gorai.013G118400 Gossypium raimondii HOM05D002211 ORTHO05D002206 3.9e-10 69.3 167 34.7
THA.LOC104820745 Tarenaya hassleriana HOM05D002211 ORTHO05D002206 3.9e-10 69.3 169 32.0
Gohir.A13G102400 Gossypium hirsutum HOM05D002211 ORTHO05D002206 5.1e-10 68.9 169 34.3
Thecc.05G260900 Theobroma cacao HOM05D002211 ORTHO05D002206 6.6e-10 68.6 164 37.8
ClCG11G010190 Citrullus lanatus HOM05D002211 ORTHO05D002206 8.7e-10 68.2 172 34.3
Psat0s3509g0040 Pisum sativum HOM05D002211 ORTHO05D002206 8.7e-10 68.2 165 34.5
FvH4_6g01200 Fragaria vesca HOM05D001040 ORTHO05D002795 1.1e-09 67.8 160 36.9
MD04G1235700 Malus domestica HOM05D002211 ORTHO05D002206 1.1e-09 67.8 174 35.1
Psat3g005480 Pisum sativum HOM05D002211 ORTHO05D002206 1.1e-09 67.8 149 38.3
Actinidia34770 Actinidia chinensis HOM05D002211 ORTHO05D002206 1.9e-09 67.0 167 29.9
BraA10t44184Z Brassica rapa HOM05D002211 ORTHO05D002206 1.9e-09 67.0 162 30.9
Migut.F02065 Erythranthe guttata HOM05D002211 ORTHO05D002206 1.9e-09 67.0 166 33.7
Cc09_g03180 Coffea canephora HOM05D002211 ORTHO05D002206 2.5e-09 66.6 41 75.6
TWI32G0781 Tripterygium wilfordii HOM05D002211 ORTHO05D002206 2.5e-09 66.6 154 35.7
TWI60G0660 Tripterygium wilfordii HOM05D002211 ORTHO05D002206 2.5e-09 66.6 150 36.0
Haze_04489 Corylus avellana HOM05D002211 ORTHO05D002206 3.3e-09 66.2 148 35.8
A10p21210 Brassica napus HOM05D002211 ORTHO05D002206 5.6e-09 65.5 162 32.7
C09p58640 Brassica napus HOM05D002211 ORTHO05D002206 5.6e-09 65.5 162 32.7
BolC9t58706H Brassica oleracea HOM05D002211 ORTHO05D002206 5.6e-09 65.5 162 32.7
Aqoxy5G00107 Aquilegia oxysepala HOM05D002211 ORTHO05D002206 7.3e-09 65.1 151 34.4
Duzib106G0223 Durio zibethinus HOM05D002211 ORTHO05D002206 9.6e-09 64.7 160 35.6
Aa31LG11G11290 Aethionema arabicum HOM05D002211 ORTHO05D002206 1.2e-08 64.3 164 29.9
FAN02G1834 Fragaria x ananassa HOM05D002211 ORTHO05D002206 1.2e-08 64.3 194 31.4
BcaB08g36688 Brassica carinata HOM05D002211 ORTHO05D002206 2.1e-08 63.5 164 30.5
TAR636G2930 Trochodendron aralioides HOM05D002211 ORTHO05D002206 2.1e-08 63.5 154 35.7
EL10Ac4g09798 Beta vulgaris HOM05D002211 ORTHO05D002206 3.6e-08 62.8 176 33.0
Lalb_Chr04g0261851 Lupinus albus HOM05D002211 ORTHO05D002206 3.6e-08 62.8 160 33.1
Psat0s3038g0080 Pisum sativum HOM05D002211 ORTHO05D002206 3.6e-08 62.8 158 34.2
THA.LOC104827277 Tarenaya hassleriana HOM05D002211 ORTHO05D002206 3.6e-08 62.8 156 32.1
Actinidia38919 Actinidia chinensis HOM05D002211 ORTHO05D002206 4.7e-08 62.4 60 56.7
arahy.Tifrunner.gnm1.ann1.ML5U0X Arachis hypogaea HOM05D002211 ORTHO05D002206 4.7e-08 62.4 151 33.1
Carub.0006s1659 Capsella rubella HOM05D002211 ORTHO05D002206 6.2e-08 62.0 160 33.1
Atru.chr2.1234 Acer truncatum HOM05D002211 ORTHO05D002206 8.1e-08 61.6 180 33.9
QL01p047517 Quercus lobata HOM05D002211 ORTHO05D002206 1.1e-07 61.2 168 33.3
Nn1g08275 Nelumbo nucifera HOM05D002211 ORTHO05D002206 1.8e-07 60.5 149 33.6
TAR362G0774 Trochodendron aralioides HOM05D002211 ORTHO05D002206 1.8e-07 60.5 161 32.3
TAR365G0725 Trochodendron aralioides HOM05D002211 ORTHO05D002206 1.8e-07 60.5 145 34.5
Aqoxy5G00111 Aquilegia oxysepala HOM05D002211 ORTHO05D002206 2.4e-07 60.1 150 32.7
Gohir.D10G077733 Gossypium hirsutum HOM05D002211 ORTHO05D002206 2.4e-07 60.1 62 51.6
Sopen04g021740 Solanum pennellii HOM05D002211 ORTHO05D002206 2.4e-07 60.1 143 36.4
PGSC0003DMG400004509 Solanum tuberosum HOM05D002211 ORTHO05D002206 2.4e-07 60.1 143 32.9
Ciclev10022368m.g Citrus clementina HOM05D002211 ORTHO05D002206 3.1e-07 59.7 173 35.3
Eucgr.H04158 Eucalyptus grandis HOM05D002211 ORTHO05D002206 3.1e-07 59.7 162 30.9
Glyma.10G169100 Glycine max HOM05D002211 ORTHO05D002206 3.1e-07 59.7 162 28.4
Gohir.D10G077875 Gossypium hirsutum HOM05D002211 ORTHO05D002206 3.1e-07 59.7 62 51.6
Gorai.011G084500 Gossypium raimondii HOM05D002211 ORTHO05D002206 3.1e-07 59.7 31 80.6
Potri.015G040500 Populus trichocarpa HOM05D002211 ORTHO05D002206 3.1e-07 59.7 65 50.8
BraA02t05441Z Brassica rapa HOM05D002211 ORTHO05D002206 5.3e-07 58.9 160 31.2
Phvul.L001850 Phaseolus vulgaris HOM05D002211 ORTHO05D002206 5.3e-07 58.9 167 31.7
Sc06g0005240 Simmondsia chinensis HOM05D002211 ORTHO05D002206 5.3e-07 58.9 90 44.4
CARHR194750 Cardamine hirsuta HOM05D002211 ORTHO05D002206 6.9e-07 58.5 146 30.1
Gohir.D08G053500 Gossypium hirsutum HOM05D002211 ORTHO05D002206 9.0e-07 58.2 31 77.4
Gorai.013G198900 Gossypium raimondii HOM05D002211 ORTHO05D002206 9.0e-07 58.2 31 77.4
Psat3g004920 Pisum sativum HOM05D002211 ORTHO05D002206 9.0e-07 58.2 44 63.6
Solyc04g050790.3 Solanum lycopersicum HOM05D002211 ORTHO05D002206 9.0e-07 58.2 143 32.9
BolC2t06888H Brassica oleracea HOM05D002211 ORTHO05D002206 1.2e-06 57.8 168 30.4
FAN09G3091 Fragaria x ananassa HOM05D002211 ORTHO05D002206 1.2e-06 57.8 226 30.1
SGA_v2.0_scaffold13G06340 Striga asiatica HOM05D002211 ORTHO05D002206 1.2e-06 57.8 147 30.6
C02p09800 Brassica napus HOM05D002211 ORTHO05D002206 1.5e-06 57.4 169 30.2
CDE05G1888 Ceratophyllum demersum HOM05D002211 ORTHO05D002206 2.0e-06 57.0 144 31.2
Thhalv10014852m.g Eutrema salsugineum HOM05D002211 ORTHO05D002206 2.0e-06 57.0 176 29.0
Manes.12G053700 Manihot esculenta HOM05D002211 ORTHO05D002206 2.6e-06 56.6 137 33.6
SalBow1G4707 Salvia bowleyana HOM05D002211 ORTHO05D002206 2.6e-06 56.6 31 77.4
TAR365G1226 Trochodendron aralioides HOM05D002211 ORTHO05D002206 4.4e-06 55.8 143 32.9
A02p04820 Brassica napus HOM05D002211 ORTHO05D002206 5.8e-06 55.5 169 27.8
CANSAT01G1044 Cannabis sativa HOM05D002211 ORTHO05D002206 5.8e-06 55.5 152 29.6
Nitab4.5_0000504g0030 Nicotiana tabacum HOM05D002211 ORTHO05D002206 5.8e-06 55.5 31 74.2
Hund07149 Selenicereus undatus HOM05D002211 ORTHO05D002206 5.8e-06 55.5 184 29.3
AL6G29540 Arabidopsis lyrata HOM05D002211 ORTHO05D002206 7.6e-06 55.1 163 28.2
Duzib138G0235 Durio zibethinus HOM05D002211 ORTHO05D002206 9.9e-06 54.7 147 31.3
Thecc.01G211400 Theobroma cacao HOM05D002211 ORTHO05D002206 9.9e-06 54.7 142 32.4


User provided reference genes

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