Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_005505 Daucus carota HOM05D006824 ORTHO05D008779 1.7e-148 529.3 260 100.0
Lj8A196G47 Lonicera japonica HOM05D006824 ORTHO05D008779 1.3e-87 327.0 218 67.9
MD12G1258900 Malus domestica HOM05D006824 ORTHO05D008779 1.7e-87 326.6 215 67.4
CSS0012922 Camellia sinensis var. sinensis HOM05D006824 ORTHO05D008779 4.9e-87 325.1 217 67.3
CSS0029100 Camellia sinensis var. sinensis HOM05D006824 ORTHO05D008779 4.9e-87 325.1 217 67.3
Prupe.6G359400 Prunus persica HOM05D006824 ORTHO05D008779 8.4e-87 324.3 238 65.5
GSVIVG01019144001 Vitis vinifera HOM05D006824 ORTHO05D008779 8.4e-87 324.3 211 67.8
Manes.14G158930 Manihot esculenta HOM05D006824 ORTHO05D008779 3.2e-86 322.4 197 71.1
Rhsim03G0265800 Rhododendron simsii HOM05D006824 ORTHO05D008779 4.2e-86 322.0 224 65.6
RcHm_v2.0_Chr3g0448181 Rosa chinensis HOM05D006824 ORTHO05D008779 4.2e-86 322.0 244 60.2
Actinidia38928 Actinidia chinensis HOM05D006824 ORTHO05D008779 5.5e-86 321.6 201 71.1
ECA232G2571 Erigeron canadensis HOM05D006824 ORTHO05D008779 1.6e-85 320.1 204 68.6
Dinv04348 Davidia involucrata HOM05D006824 ORTHO05D008779 2.1e-85 319.7 239 64.9
FAN05G0802 Fragaria x ananassa HOM05D006824 ORTHO05D008779 2.1e-85 319.7 242 62.0
Thecc.05G206500 Theobroma cacao HOM05D006824 ORTHO05D008779 4.6e-85 318.5 214 67.8
HanXRQChr11g0323941 Helianthus annuus HOM05D006824 ORTHO05D008779 1.0e-84 317.4 223 63.7
VMungo1383G3541 Vigna mungo HOM05D006824 ORTHO05D008779 1.0e-84 317.4 241 62.2
Haze_04530 Corylus avellana HOM05D006824 ORTHO05D008779 3.0e-84 315.8 213 67.1
Lsat_1_v5_gn_9_48761 Lactuca sativa HOM05D006824 ORTHO05D008779 3.0e-84 315.8 204 68.1
vmacro06000 Vaccinium macrocarpon HOM05D006824 ORTHO05D008779 3.9e-84 315.5 227 64.3
Atru.chr12.2132 Acer truncatum HOM05D006824 ORTHO05D008779 6.7e-84 314.7 237 58.2
CiPaw.08G117600 Carya illinoinensis HOM05D006824 ORTHO05D008779 6.7e-84 314.7 204 68.1
TAR362G0347 Trochodendron aralioides HOM05D006824 ORTHO05D008779 6.7e-84 314.7 238 63.0
CANSAT54G2581 Cannabis sativa HOM05D006824 ORTHO05D008779 8.7e-84 314.3 237 61.2
Duzib128G1599 Durio zibethinus HOM05D006824 ORTHO05D008779 1.1e-83 313.9 213 66.2
Psat3g104840 Pisum sativum HOM05D006824 ORTHO05D008779 1.5e-83 313.5 226 64.2
COL.COLO4_19831 Corchorus olitorius HOM05D006824 ORTHO05D008779 1.9e-83 313.2 226 63.3
Lalb_Chr19g0126751 Lupinus albus HOM05D006824 ORTHO05D008779 2.5e-83 312.8 203 69.0
Potri.010G143000 Populus trichocarpa HOM05D006824 ORTHO05D008779 2.5e-83 312.8 197 71.1
TPR.G28449 Trifolium pratense HOM05D006824 ORTHO05D008779 3.3e-83 312.4 231 61.9
PGSC0003DMG400023472 Solanum tuberosum HOM05D006824 ORTHO05D008779 5.6e-83 311.6 220 63.6
Sopen05g034220 Solanum pennellii HOM05D006824 ORTHO05D008779 2.1e-82 309.7 223 62.8
Cc09_g03430 Coffea canephora HOM05D006824 ORTHO05D008779 2.8e-82 309.3 234 62.8
Nitab4.5_0005183g0030 Nicotiana tabacum HOM05D006824 ORTHO05D008779 3.7e-82 308.9 217 62.7
Phvul.008G055700 Phaseolus vulgaris HOM05D006824 ORTHO05D008779 3.7e-82 308.9 241 60.6
CAN.G694.18 Capsicum annuum HOM05D006824 ORTHO05D008779 6.2e-82 308.1 204 66.2
Glyma.09G252100 Glycine max HOM05D006824 ORTHO05D008779 6.2e-82 308.1 237 62.4
arahy.Tifrunner.gnm1.ann1.3Y20MY Arachis hypogaea HOM05D006824 ORTHO05D008779 1.1e-81 307.4 221 63.3
Medtr7g079530 Medicago truncatula HOM05D006824 ORTHO05D008779 1.1e-81 307.4 230 61.3
Glyma.18G240500 Glycine max HOM05D006824 ORTHO05D008779 1.4e-81 307.0 239 61.5
Eucgr.H01379 Eucalyptus grandis HOM05D006824 ORTHO05D008779 1.8e-81 306.6 238 58.8
Sabra10G0110900 Salix brachista HOM05D006824 ORTHO05D008779 1.8e-81 306.6 203 67.5
arahy.Tifrunner.gnm1.ann1.8HY0WZ Arachis hypogaea HOM05D006824 ORTHO05D008779 2.4e-81 306.2 221 62.9
Oeu010150.1 Olea europaea HOM05D006824 ORTHO05D008779 2.4e-81 306.2 221 62.0
Gohir.A02G138800 Gossypium hirsutum HOM05D006824 ORTHO05D008779 4.0e-81 305.4 212 65.1
Ca_07965_v3 Cicer arietinum L. HOM05D006824 ORTHO05D008779 6.9e-81 304.7 222 62.6
Gorai.003G050700 Gossypium raimondii HOM05D006824 ORTHO05D008779 9.0e-81 304.3 212 65.6
AUR62006674 Chenopodium quinoa HOM05D006824 ORTHO05D008779 1.5e-80 303.5 222 64.0
TWI14G0776 Tripterygium wilfordii HOM05D006824 ORTHO05D008779 2.6e-80 302.8 194 69.6
PGR031G0982 Punica granatum HOM05D006824 ORTHO05D008779 3.4e-80 302.4 235 56.6
AUR62000332 Chenopodium quinoa HOM05D006824 ORTHO05D008779 4.5e-80 302.0 226 63.3
SGA_v2.0_scaffold13G06472 Striga asiatica HOM05D006824 ORTHO05D008779 5.8e-80 301.6 222 61.3
EL10Ac4g09985 Beta vulgaris HOM05D006824 ORTHO05D008779 1.0e-79 300.8 219 64.8
PSO170G6807 Papaver somniferum HOM05D006824 ORTHO05D008779 2.2e-79 299.7 225 62.2
CDE09G0666 Ceratophyllum demersum HOM05D006824 ORTHO05D008779 2.9e-79 299.3 227 60.8
ClCG11G010940 Citrullus lanatus HOM05D006824 ORTHO05D008779 2.5e-78 296.2 201 64.7
Aqoxy5G00154 Aquilegia oxysepala HOM05D006824 ORTHO05D008779 3.2e-78 295.8 245 58.0
A07p26320 Brassica napus HOM05D006824 ORTHO05D008779 9.3e-78 294.3 208 63.9
FAN14G1847 Fragaria x ananassa HOM05D006824 ORTHO05D008779 9.3e-78 294.3 239 58.6
C06p28710 Brassica napus HOM05D006824 ORTHO05D008779 1.6e-77 293.5 234 59.8
BraA07t30276Z Brassica rapa HOM05D006824 ORTHO05D008779 2.1e-77 293.1 238 58.8
CARHR049030 Cardamine hirsuta HOM05D006824 ORTHO05D008779 3.5e-77 292.4 220 64.1
FAN02G3690 Fragaria x ananassa HOM05D006824 ORTHO05D008779 6.0e-77 291.6 244 57.0
Sed0011929 Sechium edule HOM05D006824 ORTHO05D008779 1.0e-76 290.8 197 65.5
Migut.F01795 Erythranthe guttata HOM05D006824 ORTHO05D008779 1.8e-76 290.0 218 60.6
Sp5g35980 Schrenkiella parvula HOM05D006824 ORTHO05D008779 3.0e-76 289.3 198 66.2
CsaV3_2G009540 Cucumis sativus L. HOM05D006824 ORTHO05D008779 3.9e-76 288.9 224 58.0
THA.LOC104813550 Tarenaya hassleriana HOM05D006824 ORTHO05D008779 5.1e-76 288.5 198 62.6
CDE02G0053 Ceratophyllum demersum HOM05D006824 ORTHO05D008779 8.7e-76 287.7 213 62.0
Thhalv10019052m.g Eutrema salsugineum HOM05D006824 ORTHO05D008779 1.9e-75 286.6 198 65.7
AL2G41760 Arabidopsis lyrata HOM05D006824 ORTHO05D008779 3.3e-75 285.8 199 66.3
Aa31LG4G40 Aethionema arabicum HOM05D006824 ORTHO05D008779 5.7e-75 285.0 198 66.2
Carub.0002s2772 Capsella rubella HOM05D006824 ORTHO05D008779 7.4e-75 284.6 199 66.3
SalBow3G1586 Salvia bowleyana HOM05D006824 ORTHO05D008779 1.3e-74 283.9 255 52.9
BolC6t38040H Brassica oleracea HOM05D006824 ORTHO05D008779 8.2e-74 281.2 258 54.3
Ciclev10012732m.g Citrus clementina HOM05D006824 ORTHO05D008779 1.0e-71 274.2 190 66.3
AT1G79790 Arabidopsis thaliana HOM05D006824 ORTHO05D008779 3.8e-71 272.3 224 58.9
Lj1g0017863 Lotus japonicus HOM05D006824 ORTHO05D008779 3.8e-71 272.3 206 63.6
HPP92_009935 Vanilla planifolia HOM05D006824 ORTHO05D008779 5.5e-70 268.5 178 65.7
Nn1g09799 Nelumbo nucifera HOM05D006824 ORTHO05D008779 2.5e-67 259.6 188 64.9
Ah.06g195550 Amaranthus hybridus HOM05D006824 ORTHO05D008779 9.7e-67 257.7 221 58.8
MBI08_g02107_MAGBIO Magnolia biondii HOM05D006824 ORTHO05D008779 3.7e-66 255.8 173 64.2
Cpa.g.sc123.9 Carica papaya HOM05D006824 ORTHO05D008779 1.2e-64 250.8 206 58.3
MELO3C025302.2 Cucumis melo HOM05D006824 ORTHO05D008779 1.5e-64 250.4 187 60.4
MELO3C008753.2 Cucumis melo HOM05D006824 ORTHO05D008779 7.7e-64 248.1 182 61.5
SMO361G0474 Selaginella moellendorffii HOM05D006824 ORTHO05D008779 2.2e-63 246.5 217 54.4
Pp3c3_9990 Physcomitrium patens HOM05D006824 ORTHO05D008779 1.6e-61 240.4 225 49.3
AagrBONN_evm.TU.Sc2ySwM_344.3559 Anthoceros agrestis HOM05D006824 ORTHO05D008779 2.7e-61 239.6 194 56.7
Mapoly0002s0020 Marchantia polymorpha HOM05D006824 ORTHO05D008779 2.7e-61 239.6 193 53.9
FvH4_6g00710 Fragaria vesca HOM05D006824 ORTHO05D008779 1.4e-60 237.3 180 62.2
CBR_g54655 Chara braunii HOM05D006824 ORTHO05D008779 5.1e-60 235.3 195 54.4
Hma1.2p1_0171F.1_g075760 Hydrangea macrophylla HOM05D006824 ORTHO05D008779 1.1e-59 234.2 134 76.9
Nitab4.5_0009285g0020 Nicotiana tabacum HOM05D006824 ORTHO05D008779 8.2e-58 228.0 179 59.8
Zm00001eb169290 Zea mays HOM05D006824 ORTHO05D008779 8.2e-58 228.0 184 58.2
Gohir.D03G049300 Gossypium hirsutum HOM05D006824 ORTHO05D008779 1.1e-57 227.6 188 60.6
SalBow3G1143 Salvia bowleyana HOM05D006824 ORTHO05D008779 2.2e-55 219.9 187 52.4
Cre13.g563200 Chlamydomonas reinhardtii HOM05D006824 ORTHO05D008779 2.2e-47 193.4 197 48.2
QL01p046721 Quercus lobata HOM05D006824 ORTHO05D008779 3.8e-47 192.6 128 65.6
MD04G1242100 Malus domestica HOM05D006824 ORTHO05D008779 4.4e-43 179.1 109 69.7
Nitab4.5_0008294g0020 Nicotiana tabacum HOM05D006824 ORTHO05D008779 1.6e-40 170.6 235 42.1
arahy.Tifrunner.gnm1.ann1.EIZA4A Arachis hypogaea HOM05D006824 ORTHO05D008779 5.0e-39 165.6 102 70.6
Hund07329 Selenicereus undatus HOM05D006824 ORTHO05D008779 1.1e-38 164.5 211 42.2
PRCOL_00006210 Prasinoderma coloniale HOM05D006824 ORTHO05D008779 5.5e-38 162.2 182 40.1
arahy.Tifrunner.gnm1.ann1.JEI8NT Arachis hypogaea HOM05D006824 ORTHO05D008779 2.6e-35 153.3 145 52.4
FAN09G4644 Fragaria x ananassa HOM05D006824 ORTHO05D008779 2.9e-31 139.8 81 74.1
Solyc05g055820.3 Solanum lycopersicum HOM05D006824 ORTHO05D008779 1.8e-28 130.6 93 60.2
CARHR074720 Cardamine hirsuta HOM05D006824 ORTHO05D008779 1.9e-22 110.5 88 58.0
Psat3g104160 Pisum sativum HOM05D006824 ORTHO05D008779 1.5e-19 100.9 60 75.0
MD04G1242000 Malus domestica HOM05D006824 ORTHO05D008779 3.4e-19 99.8 73 61.6
ATR0824G111 Amborella trichopoda HOM05D006824 ORTHO05D008779 8.3e-18 95.1 97 49.5
SEGI_14412 Sequoiadendron giganteum HOM05D006824 ORTHO05D008779 1.7e-15 87.4 56 64.3
arahy.Tifrunner.gnm1.ann1.X7EDXL Arachis hypogaea HOM05D006824 ORTHO05D021501 3.9e-15 86.3 55 70.9
ATR0263G001 Amborella trichopoda HOM05D006824 ORTHO05D008779 8.0e-13 78.6 67 53.7
SEGI_33071 Sequoiadendron giganteum HOM05D006824 ORTHO05D008779 2.9e-10 70.1 65 46.2
arahy.Tifrunner.gnm1.ann1.0X0W56 Arachis hypogaea HOM05D006824 ORTHO05D021501 4.9e-10 69.3 97 41.2
arahy.Tifrunner.gnm1.ann1.2JVF5K Arachis hypogaea HOM05D001175 ORTHO05D021501 4.9e-10 69.3 92 43.5
arahy.Tifrunner.gnm1.ann1.96LZZJ Arachis hypogaea HOM05D006824 ORTHO05D021501 4.9e-10 69.3 92 43.5
arahy.Tifrunner.gnm1.ann1.DM3ST4 Arachis hypogaea HOM05D006824 ORTHO05D021501 4.9e-10 69.3 92 43.5
arahy.Tifrunner.gnm1.ann1.LN2II4 Arachis hypogaea HOM05D006661 ORTHO05D021501 1.4e-09 67.8 91 42.9
FAN09G1422 Fragaria x ananassa HOM05D001170 ORTHO05D002759 3.2e-09 66.6 54 50.0


User provided reference genes

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