Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_005480 Daucus carota HOM05D014268 ORTHO05D014203 3.6e-91 338.2 166 100.0
DCAR_022724 Daucus carota HOM05D014268 ORTHO05D014203 3.6e-91 338.2 166 100.0
DCAR_028303 Daucus carota HOM05D014268 ORTHO05D014203 1.7e-80 302.8 166 88.6
DCAR_017375 Daucus carota HOM05D014268 ORTHO05D014203 1.7e-69 266.2 166 75.3
DCAR_018063 Daucus carota HOM05D014268 ORTHO05D014203 1.7e-69 266.2 166 75.3
DCAR_024809 Daucus carota HOM05D014268 ORTHO05D014203 1.7e-69 266.2 166 75.3
DCAR_005058 Daucus carota HOM05D014268 ORTHO05D014203 3.1e-66 255.4 166 71.1
DCAR_010261 Daucus carota HOM05D014268 ORTHO05D014203 4.9e-64 248.1 166 69.9
DCAR_024272 Daucus carota HOM05D014268 ORTHO05D014203 2.5e-52 209.1 166 63.9
CSS0036731 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 1.5e-09 67.0 158 28.5
CSS0032736 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 2.6e-09 66.2 158 27.2
CSS0027105 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 3.4e-09 65.9 150 29.3
CSS0041590 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 3.4e-09 65.9 158 27.2
CSS0043443 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 3.4e-09 65.9 150 28.7
COL.COLO4_07368 Corchorus olitorius HOM05D000003 ORTHO05D000022 4.5e-09 65.5 159 25.2
RcHm_v2.0_Chr5g0018821 Rosa chinensis HOM05D000003 ORTHO05D000022 4.5e-09 65.5 161 23.6
RcHm_v2.0_Chr5g0040021 Rosa chinensis HOM05D000003 ORTHO05D000022 4.5e-09 65.5 161 23.6
RcHm_v2.0_Chr2g0128961 Rosa chinensis HOM05D000003 ORTHO05D000022 5.9e-09 65.1 161 28.0
CSS0016748 Camellia sinensis var. sinensis HOM05D000155 ORTHO05D000022 1.0e-08 64.3 143 28.0
vmacro00419 Vaccinium macrocarpon HOM05D000003 ORTHO05D000022 1.0e-08 64.3 156 27.6
DCAR_004920 Daucus carota HOM05D024387 ORTHO05D014203 1.3e-08 63.9 135 28.1
CSS0038037 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 2.2e-08 63.2 158 27.2
Atru.chr2.2033 Acer truncatum HOM05D000003 ORTHO05D000167 2.9e-08 62.8 150 30.0
CSS0009370 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 5.0e-08 62.0 158 27.2
CSS0032702 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 5.0e-08 62.0 146 26.7
LjContig00408g0000741 Lotus japonicus HOM05D000003 ORTHO05D001390 1.4e-07 60.5 86 37.2
CSS0010523 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 4.2e-07 58.9 157 28.7
RcHm_v2.0_Chr7g0236061 Rosa chinensis HOM05D000003 ORTHO05D000004 4.2e-07 58.9 149 24.8
vmacro06797 Vaccinium macrocarpon HOM05D000003 ORTHO05D000022 4.2e-07 58.9 148 26.4
CSS0047653 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 7.2e-07 58.2 153 30.1
CSS0023133 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 9.4e-07 57.8 150 28.7
CSS0044722 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 1.6e-06 57.0 150 28.7
Nitab4.5_0007164g0040 Nicotiana tabacum HOM05D014268 ORTHO05D014203 1.6e-06 57.0 108 28.7
RcHm_v2.0_Chr1g0351011 Rosa chinensis HOM05D000003 ORTHO05D000004 1.6e-06 57.0 147 27.2
Atru.chr2.669 Acer truncatum HOM05D000003 ORTHO05D000004 2.1e-06 56.6 135 30.4
QL03p033496 Quercus lobata HOM05D000003 ORTHO05D000004 2.1e-06 56.6 135 27.4
Sabra17G0024800 Salix brachista HOM05D000003 ORTHO05D000022 2.1e-06 56.6 159 26.4
COL.COLO4_27635 Corchorus olitorius HOM05D000003 ORTHO05D000022 3.6e-06 55.8 160 28.1
FvH4_5g27995 Fragaria vesca HOM05D000003 ORTHO05D000022 3.6e-06 55.8 157 28.0
Lalb_Chr09g0330401 Lupinus albus HOM05D000155 ORTHO05D000022 3.6e-06 55.8 167 27.5
SHI31029 Sapria himalayana HOM05D004990 ORTHO05D000022 3.6e-06 55.8 147 26.5
Lalb_Chr07g0182561 Lupinus albus HOM05D000155 ORTHO05D000022 4.7e-06 55.5 168 24.4
EL10Ac5g11712 Beta vulgaris HOM05D000003 ORTHO05D000022 6.1e-06 55.1 178 23.6
COL.COLO4_12315 Corchorus olitorius HOM05D000003 ORTHO05D000022 6.1e-06 55.1 127 28.3
Sabra17G0024900 Salix brachista HOM05D000003 ORTHO05D000022 6.1e-06 55.1 159 25.8
CSS0026614 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 7.9e-06 54.7 150 28.7
Hma1.2p1_0150F.1_g066640 Hydrangea macrophylla HOM05D000003 ORTHO05D000022 7.9e-06 54.7 82 32.9


User provided reference genes

Program Settings