Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_005460 Daucus carota HOM05D005420 ORTHO05D006524 9.6e-153 543.5 284 100.0
TAR636G0539 Trochodendron aralioides HOM05D005420 ORTHO05D006524 2.3e-101 372.9 264 78.0
Aqoxy1G01859 Aquilegia oxysepala HOM05D005420 ORTHO05D006524 2.3e-98 362.8 202 90.1
CSS0022736 Camellia sinensis var. sinensis HOM05D005420 ORTHO05D006524 2.3e-98 362.8 205 91.2
CSS0017727 Camellia sinensis var. sinensis HOM05D005420 ORTHO05D006524 8.9e-98 360.9 246 79.3
ECA248G1232 Erigeron canadensis HOM05D005420 ORTHO05D006524 8.9e-98 360.9 232 84.1
Migut.G00921 Erythranthe guttata HOM05D005420 ORTHO05D006524 1.5e-97 360.1 209 87.6
MD00G1087500 Malus domestica HOM05D005420 ORTHO05D006524 1.5e-97 360.1 258 77.9
SalBow3G4646 Salvia bowleyana HOM05D005420 ORTHO05D006524 1.5e-97 360.1 227 83.7
Prupe.7G269700 Prunus persica HOM05D005420 ORTHO05D006524 2.0e-97 359.8 268 74.6
CANSAT56G1087 Cannabis sativa HOM05D005420 ORTHO05D006524 3.4e-97 359.0 261 76.6
Dinv33245 Davidia involucrata HOM05D005420 ORTHO05D006524 3.4e-97 359.0 220 86.4
FvH4_1g00160 Fragaria vesca HOM05D005420 ORTHO05D006524 5.7e-97 358.2 262 76.3
FAN23G1410 Fragaria x ananassa HOM05D005420 ORTHO05D006524 5.7e-97 358.2 262 76.7
FAN28G0609 Fragaria x ananassa HOM05D005420 ORTHO05D006524 5.7e-97 358.2 262 76.3
GSVIVG01038249001 Vitis vinifera HOM05D005420 ORTHO05D006524 5.7e-97 358.2 214 87.9
FAN26G3138 Fragaria x ananassa HOM05D005420 ORTHO05D006524 9.8e-97 357.5 262 76.3
RcHm_v2.0_Chr2g0084451 Rosa chinensis HOM05D005420 ORTHO05D006524 2.9e-96 355.9 246 78.9
TAR365G1242 Trochodendron aralioides HOM05D005420 ORTHO05D006524 2.9e-96 355.9 263 75.7
CiPaw.01G201600 Carya illinoinensis HOM05D005420 ORTHO05D006524 3.7e-96 355.5 204 89.7
Cc03_g15990 Coffea canephora HOM05D005420 ORTHO05D006524 3.7e-96 355.5 268 73.1
Glyma.07G273700 Glycine max HOM05D005420 ORTHO05D006524 3.7e-96 355.5 227 82.8
Lj6C285T2 Lonicera japonica HOM05D005420 ORTHO05D006524 3.7e-96 355.5 199 93.5
Ciclev10012405m.g Citrus clementina HOM05D005420 ORTHO05D006524 1.4e-95 353.6 251 76.5
arahy.Tifrunner.gnm1.ann1.D6NWCJ Arachis hypogaea HOM05D005420 ORTHO05D006524 1.8e-95 353.2 247 78.1
arahy.Tifrunner.gnm1.ann1.EMGW5K Arachis hypogaea HOM05D005420 ORTHO05D006524 1.8e-95 353.2 247 78.1
MSTRG.24552 Avicennia marina HOM05D005420 ORTHO05D006524 1.8e-95 353.2 257 75.1
Eucgr.H01455 Eucalyptus grandis HOM05D005420 ORTHO05D006524 1.8e-95 353.2 202 90.1
Cfa008513 Carpinus fangiana HOM05D005420 ORTHO05D006524 4.1e-95 352.1 204 89.2
HanXRQChr11g0343501 Helianthus annuus HOM05D005420 ORTHO05D006524 4.1e-95 352.1 207 88.4
CDE09G0694 Ceratophyllum demersum HOM05D005420 ORTHO05D006524 7.0e-95 351.3 208 85.6
Glyma.17G000800 Glycine max HOM05D005420 ORTHO05D006524 9.2e-95 350.9 204 87.7
VMungo1215G3385 Vigna mungo HOM05D005420 ORTHO05D006524 1.2e-94 350.5 266 74.8
ClCG09G014850 Citrullus lanatus HOM05D005420 ORTHO05D006524 1.6e-94 350.1 222 82.4
Atru.chr12.1712 Acer truncatum HOM05D005420 ORTHO05D006524 2.0e-94 349.7 204 88.2
Nitab4.5_0000013g0040 Nicotiana tabacum HOM05D005420 ORTHO05D006524 2.0e-94 349.7 265 72.5
Nitab4.5_0008205g0010 Nicotiana tabacum HOM05D005420 ORTHO05D006524 2.0e-94 349.7 265 72.8
Thecc.05G186000 Theobroma cacao HOM05D005420 ORTHO05D006524 2.7e-94 349.4 246 77.6
MBI07_g10354_MAGBIO Magnolia biondii HOM05D005420 ORTHO05D006524 4.6e-94 348.6 264 71.6
MD15G1143300 Malus domestica HOM05D005420 ORTHO05D006524 4.6e-94 348.6 259 76.1
HanXRQChr01g0023651 Helianthus annuus HOM05D005420 ORTHO05D006524 7.8e-94 347.8 259 75.7
PGR119G0486 Punica granatum HOM05D005420 ORTHO05D006524 7.8e-94 347.8 199 89.9
Solyc08g015620.3 Solanum lycopersicum HOM05D005420 ORTHO05D006524 7.8e-94 347.8 208 85.1
Sopen08g005610 Solanum pennellii HOM05D005420 ORTHO05D006524 7.8e-94 347.8 208 85.1
Actinidia34566 Actinidia chinensis HOM05D005420 ORTHO05D006524 1.3e-93 347.1 249 76.7
TWI36G0345 Tripterygium wilfordii HOM05D005420 ORTHO05D006524 1.7e-93 346.7 205 86.3
PSO675G2924 Papaver somniferum HOM05D005420 ORTHO05D006524 2.3e-93 346.3 211 83.4
PSO732G0217 Papaver somniferum HOM05D005420 ORTHO05D006524 2.3e-93 346.3 211 83.4
Peaxi162Scf01205g00032 Petunia axillaris HOM05D005420 ORTHO05D006524 3.0e-93 345.9 208 85.1
Potri.013G084300 Populus trichocarpa HOM05D005420 ORTHO05D006524 3.0e-93 345.9 216 82.9
CsaV3_7G022350 Cucumis sativus L. HOM05D005420 ORTHO05D006524 3.9e-93 345.5 265 72.8
unitig_27.g25143 Utricularia gibba HOM05D005420 ORTHO05D006524 3.9e-93 345.5 200 89.5
Manes.12G003300 Manihot esculenta HOM05D005420 ORTHO05D006524 5.0e-93 345.1 267 73.8
vmacro00721 Vaccinium macrocarpon HOM05D005420 ORTHO05D006524 5.0e-93 345.1 230 81.7
Phvul.003G074600 Phaseolus vulgaris HOM05D005420 ORTHO05D006524 6.6e-93 344.7 258 74.0
Cpa.g.sc151.6 Carica papaya HOM05D005420 ORTHO05D006524 1.1e-92 344.0 204 88.2
Duzib177G0155 Durio zibethinus HOM05D005420 ORTHO05D006524 1.1e-92 344.0 252 75.4
Lsat_1_v5_gn_1_76981 Lactuca sativa HOM05D005420 ORTHO05D006524 1.9e-92 343.2 199 88.4
unitig_699.g19464 Utricularia gibba HOM05D005420 ORTHO05D006524 1.9e-92 343.2 195 89.7
Sed0010932 Sechium edule HOM05D005420 ORTHO05D006524 2.5e-92 342.8 286 68.5
QL10p064332 Quercus lobata HOM05D005420 ORTHO05D006524 5.6e-92 341.7 262 72.1
CiPaw.02G124600 Carya illinoinensis HOM05D005420 ORTHO05D006524 1.2e-91 340.5 286 67.1
Gohir.A02G106300 Gossypium hirsutum HOM05D005420 ORTHO05D006524 1.2e-91 340.5 257 74.3
Rhsim09G0003700 Rhododendron simsii HOM05D005420 ORTHO05D006524 1.2e-91 340.5 292 69.2
AUR62023710 Chenopodium quinoa HOM05D005420 ORTHO05D006524 1.6e-91 340.1 202 86.1
Gohir.D03G071700 Gossypium hirsutum HOM05D005420 ORTHO05D006524 1.6e-91 340.1 257 73.5
Gorai.003G088300 Gossypium raimondii HOM05D005420 ORTHO05D006524 1.6e-91 340.1 257 73.5
Lj4g0016379 Lotus japonicus HOM05D005420 ORTHO05D006524 1.6e-91 340.1 249 75.9
EL10Ac3g06165 Beta vulgaris HOM05D005420 ORTHO05D006524 2.1e-91 339.7 205 85.4
Duzib128G1088 Durio zibethinus HOM05D005420 ORTHO05D006524 4.7e-91 338.6 197 88.3
AUR62002482 Chenopodium quinoa HOM05D005420 ORTHO05D006524 6.2e-91 338.2 202 86.1
SGA_v2.0_scaffold12G06218 Striga asiatica HOM05D005420 ORTHO05D006524 2.3e-90 336.3 277 68.2
Actinidia18399 Actinidia chinensis HOM05D005420 ORTHO05D006524 5.2e-90 335.1 260 71.2
Ah.07g203200 Amaranthus hybridus HOM05D005420 ORTHO05D006524 6.8e-90 334.7 259 72.2
GSVIVG01026140001 Vitis vinifera HOM05D005420 ORTHO05D006524 8.9e-90 334.3 211 82.0
ATR0743G098 Amborella trichopoda HOM05D005420 ORTHO05D006524 2.0e-89 333.2 248 72.6
Aa31LG1G25640 Aethionema arabicum HOM05D005420 ORTHO05D006524 7.5e-89 331.3 194 87.6
BcaC02g12350 Brassica carinata HOM05D005420 ORTHO05D006524 7.5e-89 331.3 250 73.6
C04p04880 Brassica napus HOM05D005420 ORTHO05D006524 7.5e-89 331.3 250 73.6
THA.LOC104802345 Tarenaya hassleriana HOM05D005420 ORTHO05D006524 7.5e-89 331.3 194 88.1
AL4G42820 Arabidopsis lyrata HOM05D005420 ORTHO05D006524 1.7e-88 330.1 207 81.6
Sabra13G0078900 Salix brachista HOM05D005420 ORTHO05D006524 1.7e-88 330.1 284 66.2
AT2G43945 Arabidopsis thaliana HOM05D005420 ORTHO05D006524 2.2e-88 329.7 207 81.6
HPP92_024700 Vanilla planifolia HOM05D005420 ORTHO05D006524 2.2e-88 329.7 212 77.8
A03p24600 Brassica napus HOM05D005420 ORTHO05D006524 2.9e-88 329.3 205 82.0
Carub.0005s2660 Capsella rubella HOM05D005420 ORTHO05D006524 6.4e-88 328.2 276 66.7
CARHR139120 Cardamine hirsuta HOM05D005420 ORTHO05D006524 1.4e-87 327.0 194 86.1
Thhalv10001571m.g Eutrema salsugineum HOM05D005420 ORTHO05D006524 2.4e-87 326.2 284 67.6
C03p29330 Brassica napus HOM05D005420 ORTHO05D006524 3.2e-87 325.9 259 70.3
BolC3t15280H Brassica oleracea HOM05D005420 ORTHO05D006524 3.2e-87 325.9 259 70.3
BolC4t22118H Brassica oleracea HOM05D005420 ORTHO05D006524 3.2e-87 325.9 264 70.1
THA.LOC104804283 Tarenaya hassleriana HOM05D005420 ORTHO05D006524 3.2e-87 325.9 194 87.1
BcaB02g08884 Brassica carinata HOM05D005420 ORTHO05D006524 5.4e-87 325.1 210 80.0
BraA03t11665Z Brassica rapa HOM05D005420 ORTHO05D006524 5.4e-87 325.1 205 81.0
BraA05t19397Z Brassica rapa HOM05D005420 ORTHO05D006524 5.4e-87 325.1 261 70.5
Carub.0004s2651 Capsella rubella HOM05D005420 ORTHO05D006524 5.4e-87 325.1 290 65.9
A05p04100 Brassica napus HOM05D005420 ORTHO05D006524 1.2e-86 323.9 262 69.5
Os01g0338600 Oryza sativa ssp. japonica HOM05D005420 ORTHO05D006524 1.2e-86 323.9 258 69.8
Zm00001eb159810 Zea mays HOM05D005420 ORTHO05D006524 2.0e-86 323.2 212 80.2
Aa31LG10G14100 Aethionema arabicum HOM05D005420 ORTHO05D006524 4.6e-86 322.0 291 63.9
Psat4g001320 Pisum sativum HOM05D005420 ORTHO05D006524 4.6e-86 322.0 281 66.2
BcaB06g29350 Brassica carinata HOM05D005420 ORTHO05D006524 1.7e-85 320.1 266 67.3
AT3G59870 Arabidopsis thaliana HOM05D005420 ORTHO05D006524 2.3e-85 319.7 217 76.5
SEGI_26827 Sequoiadendron giganteum HOM05D005420 ORTHO05D006524 5.0e-85 318.5 198 82.8
TWI36G1305 Tripterygium wilfordii HOM05D005420 ORTHO05D006524 3.3e-84 315.8 278 66.2
SMO367G0538 Selaginella moellendorffii HOM05D005420 ORTHO05D006524 1.4e-82 310.5 187 83.4
Sp4g26040 Schrenkiella parvula HOM05D005420 ORTHO05D006524 1.8e-82 310.1 258 66.7
Mapoly0136s0029 Marchantia polymorpha HOM05D005420 ORTHO05D006524 4.0e-82 308.9 187 82.9
Pp3c24_16460 Physcomitrium patens HOM05D005420 ORTHO05D006524 4.4e-81 305.4 196 79.1
Pp3c8_21410 Physcomitrium patens HOM05D005420 ORTHO05D006524 4.4e-81 305.4 221 70.6
Haze_11131 Corylus avellana HOM05D005420 ORTHO05D006524 5.4e-79 298.5 340 53.8
TPR.G6015 Trifolium pratense HOM05D005420 ORTHO05D006524 1.3e-77 293.9 230 71.7
Dinv24753 Davidia involucrata HOM05D005420 ORTHO05D006524 7.3e-76 288.1 221 75.1
Migut.N03031 Erythranthe guttata HOM05D005420 ORTHO05D006524 7.3e-76 288.1 198 79.8
Manes.13G003200 Manihot esculenta HOM05D005420 ORTHO05D006524 4.7e-75 285.4 157 91.7
Nn7g37463 Nelumbo nucifera HOM05D005420 ORTHO05D006524 2.3e-74 283.1 228 71.1
Nn3g18334 Nelumbo nucifera HOM05D005420 ORTHO05D006524 1.5e-68 263.8 216 69.0
Lalb_Chr18g0044961 Lupinus albus HOM05D005420 ORTHO05D006524 1.4e-66 257.3 134 97.0
Sc25g0003040 Simmondsia chinensis HOM05D005420 ORTHO05D006524 6.8e-66 255.0 160 83.1
Hund22588 Selenicereus undatus HOM05D005420 ORTHO05D006524 2.6e-65 253.1 152 86.2
Medtr4g134910 Medicago truncatula HOM05D005420 ORTHO05D006524 9.9e-65 251.1 153 85.0
MCO05G102 Micromonas commoda HOM05D005420 ORTHO05D006524 3.8e-64 249.2 160 75.6
Cre16.g676450 Chlamydomonas reinhardtii HOM05D005420 ORTHO05D006524 3.2e-63 246.1 192 66.7
Atru.chr12.1711 Acer truncatum HOM05D005420 ORTHO05D006524 7.3e-60 235.0 193 68.9
Oeu022910.1 Olea europaea HOM05D005420 ORTHO05D006524 2.1e-59 233.4 137 88.3
PRCOL_00006877 Prasinoderma coloniale HOM05D005420 ORTHO05D006524 8.1e-59 231.5 160 70.0
Zm00001eb356860 Zea mays HOM05D005420 ORTHO05D006524 1.5e-57 227.3 257 56.0
Ca_13540_v3 Cicer arietinum L. HOM05D005420 ORTHO05D006524 1.1e-50 204.5 227 59.0
AagrBONN_evm.TU.Sc2ySwM_228.1821 Anthoceros agrestis HOM05D005420 ORTHO05D006524 1.6e-43 180.6 191 57.6
MBI07_g42072_MAGBIO Magnolia biondii HOM05D005420 ORTHO05D006524 3.2e-39 166.4 89 93.3
Sed0016168 Sechium edule HOM05D005420 ORTHO05D006524 5.5e-39 165.6 90 94.4
CDE02G3676 Ceratophyllum demersum HOM05D005420 ORTHO05D006524 5.7e-36 155.6 169 55.6
Pp3c20_1670 Physcomitrium patens HOM05D005420 ORTHO05D006524 1.0e-32 144.8 160 50.0
Eucgr.L00810 Eucalyptus grandis HOM05D005420 ORTHO05D006524 2.7e-30 136.7 87 80.5
Eucgr.H01440 Eucalyptus grandis HOM05D005420 ORTHO05D006524 2.6e-25 120.2 112 62.5
Lsat_1_v5_gn_1_75001 Lactuca sativa HOM05D005420 ORTHO05D006524 1.4e-23 114.4 78 71.8
Lsat_1_v5_gn_5_160100 Lactuca sativa HOM05D005420 ORTHO05D006524 6.1e-22 109.0 78 67.9
MSTRG.9265 Avicennia marina HOM05D005420 ORTHO05D006524 1.4e-21 107.8 87 66.7
CBR_g10867 Chara braunii HOM05D005420 ORTHO05D006524 1.5e-17 94.4 72 66.7
Sed0003231 Sechium edule HOM05D005420 ORTHO05D006524 2.5e-07 60.5 125 40.0


User provided reference genes

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