Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_005449 Daucus carota HOM05D005395 ORTHO05D006352 0.0e+00 3511.1 1778 100.0
Lj7C570T8 Lonicera japonica HOM05D005395 ORTHO05D006352 2.2e-239 833.9 846 52.7
Rhsim07G0055200 Rhododendron simsii HOM05D005395 ORTHO05D006352 5.0e-231 806.2 857 51.8
TAR633G2667 Trochodendron aralioides HOM05D005395 ORTHO05D006352 7.5e-227 792.3 847 50.1
QL11p003492 Quercus lobata HOM05D005395 ORTHO05D006352 4.2e-222 776.5 846 49.6
MD07G1010300 Malus domestica HOM05D005395 ORTHO05D006352 1.2e-219 768.5 849 50.4
Cfa008089 Carpinus fangiana HOM05D005395 ORTHO05D006352 2.6e-219 767.3 844 49.8
Prupe.2G012600 Prunus persica HOM05D005395 ORTHO05D006352 2.6e-219 767.3 845 49.6
FAN06G4072 Fragaria x ananassa HOM05D005395 ORTHO05D006352 4.8e-218 763.1 845 49.9
TWI09G1525 Tripterygium wilfordii HOM05D005395 ORTHO05D006352 6.3e-218 762.7 842 50.6
QL02p026227 Quercus lobata HOM05D005395 ORTHO05D006352 4.1e-217 760.0 808 50.5
QL05p060653 Quercus lobata HOM05D005395 ORTHO05D006352 9.1e-217 758.8 871 48.0
FAN10G2468 Fragaria x ananassa HOM05D005395 ORTHO05D006352 1.2e-216 758.4 847 49.6
FvH4_7g01000 Fragaria vesca HOM05D005395 ORTHO05D006352 4.5e-216 756.5 943 46.8
Nn7g36191 Nelumbo nucifera HOM05D005395 ORTHO05D006352 1.0e-215 755.4 848 48.1
GSVIVG01032086001 Vitis vinifera HOM05D005395 ORTHO05D006352 2.3e-215 754.2 821 50.5
CANSAT78G1614 Cannabis sativa HOM05D005395 ORTHO05D006352 3.8e-215 753.4 841 49.3
Nitab4.5_0013258g0010 Nicotiana tabacum HOM05D005395 ORTHO05D006352 1.9e-214 751.1 859 47.8
FAN03G2830 Fragaria x ananassa HOM05D005395 ORTHO05D006352 1.6e-213 748.0 942 46.1
Ciclev10030541m.g Citrus clementina HOM05D005395 ORTHO05D006352 2.1e-213 747.7 842 48.3
RcHm_v2.0_Chr1g0315901 Rosa chinensis HOM05D005395 ORTHO05D006352 4.7e-213 746.5 845 49.3
Potri.003G022600 Populus trichocarpa HOM05D005395 ORTHO05D006352 5.2e-212 743.0 876 47.0
CiPaw.13G004500 Carya illinoinensis HOM05D005395 ORTHO05D006352 1.2e-211 741.9 838 48.9
Sabra03G0014300 Salix brachista HOM05D005395 ORTHO05D006352 7.5e-211 739.2 846 47.8
Sed0006979 Sechium edule HOM05D005395 ORTHO05D006352 7.5e-211 739.2 839 47.8
Oeu063172.1 Olea europaea HOM05D005395 ORTHO05D006352 7.0e-209 732.6 760 52.2
AUR62041247 Chenopodium quinoa HOM05D005395 ORTHO05D006352 1.2e-208 731.9 843 46.1
QL12p011919 Quercus lobata HOM05D005395 ORTHO05D006352 1.0e-207 728.8 796 49.5
ClCG10G012430 Citrullus lanatus HOM05D005395 ORTHO05D006352 5.6e-206 723.0 838 47.7
Lj3g0013961 Lotus japonicus HOM05D005395 ORTHO05D006352 7.3e-206 722.6 848 47.3
Psat5g193800 Pisum sativum HOM05D005395 ORTHO05D006352 2.1e-205 721.1 840 47.4
Aqoxy1G02896 Aquilegia oxysepala HOM05D005395 ORTHO05D006352 4.7e-205 719.9 838 47.0
Glyma.08G155900 Glycine max HOM05D005395 ORTHO05D006352 8.0e-205 719.2 844 47.2
Glyma.15G274000 Glycine max HOM05D005395 ORTHO05D006352 2.3e-204 717.6 842 47.1
CAN.G1820.1 Capsicum annuum HOM05D005395 ORTHO05D006352 6.8e-204 716.1 843 46.7
Phvul.005G021500 Phaseolus vulgaris HOM05D005395 ORTHO05D006352 1.2e-203 715.3 841 47.6
Nitab4.5_0000634g0140 Nicotiana tabacum HOM05D005395 ORTHO05D006352 3.7e-202 710.3 776 48.1
VMungo1080G1687 Vigna mungo HOM05D005395 ORTHO05D006352 2.0e-200 704.5 840 46.2
Hund24995 Selenicereus undatus HOM05D005395 ORTHO05D006352 7.8e-200 702.6 842 44.4
Manes.10G091300 Manihot esculenta HOM05D005395 ORTHO05D006352 3.0e-199 700.7 771 50.6
arahy.Tifrunner.gnm1.ann1.XBA78H Arachis hypogaea HOM05D005395 ORTHO05D006352 6.6e-199 699.5 848 46.5
EL10Ac1g02254 Beta vulgaris HOM05D005395 ORTHO05D006352 2.5e-198 697.6 747 49.4
Solyc01g087095.2 Solanum lycopersicum HOM05D005395 ORTHO05D006352 1.6e-197 694.9 846 45.6
MBI03_g07304_MAGBIO Magnolia biondii HOM05D005395 ORTHO05D006352 2.8e-197 694.1 877 45.2
vmacro13663 Vaccinium macrocarpon HOM05D005395 ORTHO05D006352 1.2e-195 688.7 846 46.1
Sopen01g034170 Solanum pennellii HOM05D005395 ORTHO05D006352 2.0e-195 688.0 856 45.0
Ca_14376_v3 Cicer arietinum L. HOM05D005395 ORTHO05D006352 9.8e-195 685.6 845 46.0
SGA_v2.0_scaffold119G32730 Striga asiatica HOM05D005395 ORTHO05D006352 2.4e-193 681.0 843 44.6
Peaxi162Scf00428g00318 Petunia axillaris HOM05D005395 ORTHO05D006352 3.9e-191 673.7 841 44.7
Gohir.D04G018600 Gossypium hirsutum HOM05D005395 ORTHO05D006352 5.8e-187 659.8 851 45.8
Gorai.012G022200 Gossypium raimondii HOM05D005395 ORTHO05D006352 2.2e-186 657.9 852 46.0
MELO3C023972.2 Cucumis melo HOM05D005395 ORTHO05D006352 7.1e-185 652.9 842 44.4
Gohir.A05G396700 Gossypium hirsutum HOM05D005395 ORTHO05D006352 6.0e-184 649.8 850 45.3
HanXRQChr12g0379891 Helianthus annuus HOM05D005395 ORTHO05D006352 1.5e-182 645.2 727 48.7
PSO339G2846 Papaver somniferum HOM05D005395 ORTHO05D006352 5.8e-179 633.3 756 45.2
Migut.B01303 Erythranthe guttata HOM05D005395 ORTHO05D006352 8.7e-175 619.4 833 43.5
COL.COLO4_04642 Corchorus olitorius HOM05D005395 ORTHO05D006352 6.9e-172 609.8 840 43.1
Migut.B01025 Erythranthe guttata HOM05D005395 ORTHO05D006352 9.9e-171 605.9 828 43.1
Thecc.10G136000 Theobroma cacao HOM05D005395 ORTHO05D006352 7.1e-169 599.7 678 48.4
unitig_0.g1385 Utricularia gibba HOM05D005395 ORTHO05D006352 5.1e-167 593.6 890 39.3
PGR042G3169 Punica granatum HOM05D005395 ORTHO05D006352 8.7e-167 592.8 869 41.3
Sc04g0005700 Simmondsia chinensis HOM05D005395 ORTHO05D006352 1.3e-154 552.4 658 46.4
ECA234G1269 Erigeron canadensis HOM05D005395 ORTHO05D000002 2.1e-152 545.0 565 51.5
arahy.Tifrunner.gnm1.ann1.LX21RY Arachis hypogaea HOM05D005395 ORTHO05D006352 2.7e-152 544.7 845 39.9
AUR62014136 Chenopodium quinoa HOM05D005395 ORTHO05D006352 2.4e-148 531.6 776 40.1
Carub.0006s1507 Capsella rubella HOM05D005395 ORTHO05D006352 3.4e-147 527.7 822 38.9
AT5G16850 Arabidopsis thaliana HOM05D005395 ORTHO05D006352 2.5e-145 521.5 825 38.4
C09p60230 Brassica napus HOM05D005395 ORTHO05D006352 2.5e-145 521.5 827 38.6
BolC9t58856H Brassica oleracea HOM05D005395 ORTHO05D006352 4.2e-145 520.8 827 38.6
A10p22380 Brassica napus HOM05D005395 ORTHO05D006352 7.1e-145 520.0 826 38.4
BraA10t44297Z Brassica rapa HOM05D005395 ORTHO05D006352 1.2e-144 519.2 827 38.2
CARHR196310 Cardamine hirsuta HOM05D005395 ORTHO05D006352 1.8e-143 515.4 825 38.2
Sp6g27270 Schrenkiella parvula HOM05D005395 ORTHO05D006352 3.0e-143 514.6 825 39.0
Actinidia24666 Actinidia chinensis HOM05D005395 ORTHO05D006352 1.1e-137 496.1 821 39.0
Aa31sc160G20 Aethionema arabicum HOM05D005395 ORTHO05D006352 4.2e-137 494.2 724 39.0
Thhalv10012498m.g Eutrema salsugineum HOM05D005395 ORTHO05D006352 1.5e-134 485.7 730 38.8
Lsat_1_v5_gn_4_31580 Lactuca sativa HOM05D005395 ORTHO05D006352 1.3e-130 472.6 733 40.8
BcaC04g18841 Brassica carinata HOM05D005395 ORTHO05D006352 1.0e-122 446.4 762 37.1
HPP92_011342 Vanilla planifolia HOM05D005395 ORTHO05D006352 3.0e-119 434.9 529 43.3
Mapoly0009s0015 Marchantia polymorpha HOM05D005395 ORTHO05D006352 2.6e-115 421.8 888 30.7
AagrBONN_evm.TU.Sc2ySwM_344.2351 Anthoceros agrestis HOM05D005395 ORTHO05D006352 4.5e-115 421.0 784 32.4
Pp3c1_42700 Physcomitrium patens HOM05D005395 ORTHO05D006352 8.5e-114 416.8 787 33.2
Atru.chr11.731 Acer truncatum HOM05D005395 ORTHO05D006352 2.5e-105 388.7 363 54.0
TPR.G30923 Trifolium pratense HOM05D005395 ORTHO05D006352 4.2e-105 387.9 371 54.4
Lalb_Chr13g0291151 Lupinus albus HOM05D005395 ORTHO05D006352 9.4e-105 386.7 367 54.2
Atru.chr11.730 Acer truncatum HOM05D005395 ORTHO05D006352 4.8e-101 374.4 444 48.2
vmacro19894 Vaccinium macrocarpon HOM05D005395 ORTHO05D006352 7.0e-100 370.5 489 45.6
SHI19148 Sapria himalayana HOM05D005395 ORTHO05D006352 2.0e-99 369.0 392 50.5
CsaV3_3G032200 Cucumis sativus L. HOM05D005395 ORTHO05D006352 6.6e-98 364.0 497 42.5
Hma1.2p1_0293F.1_g116170 Hydrangea macrophylla HOM05D005395 ORTHO05D006352 1.1e-97 363.2 370 51.6
Cpa.g.sc245.16 Carica papaya HOM05D005395 ORTHO05D006352 1.1e-89 336.7 316 52.8
SHI19147 Sapria himalayana HOM05D005395 ORTHO05D006352 1.7e-85 322.8 469 40.5
DCAR_024214 Daucus carota HOM05D005395 ORTHO05D006352 9.2e-84 317.0 188 96.8
Lalb_Chr13g0291141 Lupinus albus HOM05D005395 ORTHO05D006352 4.3e-81 308.1 348 48.6
ATR0681G222 Amborella trichopoda HOM05D005395 ORTHO05D006352 8.1e-72 277.3 377 41.1
HPP92_011265 Vanilla planifolia HOM05D005395 ORTHO05D006352 5.2e-71 274.6 270 52.6
MCO03G604 Micromonas commoda HOM05D005395 ORTHO05D006352 3.1e-63 248.8 999 24.8
QL05p050737 Quercus lobata HOM05D005395 ORTHO05D006352 5.2e-63 248.1 370 40.5
SEGI_03843 Sequoiadendron giganteum HOM05D005395 ORTHO05D006352 6.0e-59 234.6 429 32.9
SEGI_22370 Sequoiadendron giganteum HOM05D005395 ORTHO05D006352 2.5e-57 229.2 359 37.6
SEGI_30633 Sequoiadendron giganteum HOM05D005395 ORTHO05D006352 2.5e-57 229.2 359 37.6
Nitab4.5_0002179g0010 Nicotiana tabacum HOM05D005395 ORTHO05D006352 1.7e-53 216.5 198 53.5
Cpa.g.sc245.15 Carica papaya HOM05D005395 ORTHO05D006352 2.3e-50 206.1 244 46.3
PSO384G3069 Papaver somniferum HOM05D005395 ORTHO05D006352 3.1e-47 195.7 242 40.9
Cfa026815 Carpinus fangiana HOM05D005395 ORTHO05D006352 5.3e-47 194.9 578 26.1
SEGI_09183 Sequoiadendron giganteum HOM05D005395 ORTHO05D006352 1.1e-39 170.6 223 38.6
CBR_g45710 Chara braunii HOM05D005395 ORTHO05D006352 1.0e-26 127.5 182 42.9
Cre04.g213652 Chlamydomonas reinhardtii HOM05D005395 ORTHO05D006352 1.3e-26 127.1 181 42.0
CDE07G1503 Ceratophyllum demersum HOM05D005395 ORTHO05D006352 7.2e-20 104.8 146 42.5
CBR_g45714 Chara braunii HOM05D005395 ORTHO05D006352 7.9e-19 101.3 360 23.1
Aa31sc690G30 Aethionema arabicum HOM05D005395 ORTHO05D006352 1.9e-12 80.1 104 39.4
PSO384G2197 Papaver somniferum HOM05D005395 ORTHO05D006352 5.5e-12 78.6 105 40.0
CSS0040942 Camellia sinensis var. sinensis HOM05D005395 ORTHO05D006352 1.2e-11 77.4 82 48.8
QL02p026296 Quercus lobata HOM05D005395 ORTHO05D006352 3.6e-11 75.9 105 37.1
CSS0041236 Camellia sinensis var. sinensis HOM05D005395 ORTHO05D006352 3.0e-10 72.8 82 47.6
CSS0036458 Camellia sinensis var. sinensis HOM05D005395 ORTHO05D006352 2.6e-09 69.7 82 46.3
CDE07G0311 Ceratophyllum demersum HOM05D005395 ORTHO05D006352 4.4e-09 68.9 72 47.2
Nitab4.5_0002179g0030 Nicotiana tabacum HOM05D005395 ORTHO05D006352 1.7e-08 67.0 57 59.6
Nitab4.5_0002179g0020 Nicotiana tabacum HOM05D005395 ORTHO05D006352 1.4e-07 63.9 149 29.5
Dinv18440 Davidia involucrata HOM05D005395 ORTHO05D006352 7.0e-07 61.6 47 57.4
CSS0042886 Camellia sinensis var. sinensis HOM05D005395 ORTHO05D006352 1.2e-06 60.8 82 42.7


User provided reference genes

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