Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_005422 Daucus carota HOM05D008392 ORTHO05D010441 1.8e-213 745.7 389 100.0
DCAR_025288 Daucus carota HOM05D008392 ORTHO05D010441 8.4e-99 364.8 389 54.2
Dinv24467 Davidia involucrata HOM05D008392 ORTHO05D010441 3.2e-58 229.9 404 39.1
Actinidia35516 Actinidia chinensis HOM05D008392 ORTHO05D010441 1.0e-48 198.4 366 37.2
Peaxi162Scf01061g00127 Petunia axillaris HOM05D008392 ORTHO05D010441 2.3e-48 197.2 388 35.3
Cc02_g35180 Coffea canephora HOM05D008392 ORTHO05D010441 6.3e-46 189.1 359 36.2
CAN.G1076.23 Capsicum annuum HOM05D008392 ORTHO05D010441 1.7e-43 181.0 372 34.9
Sopen01g044120 Solanum pennellii HOM05D008392 ORTHO05D010441 1.4e-40 171.4 383 34.2
vmacro01573 Vaccinium macrocarpon HOM05D000001 ORTHO05D000003 1.8e-40 171.0 404 34.4
Solyc01g100620.3 Solanum lycopersicum HOM05D008392 ORTHO05D010441 5.2e-40 169.5 379 34.0
Lsat_1_v5_gn_5_40160 Lactuca sativa HOM05D008392 ORTHO05D010441 1.3e-38 164.9 309 35.6
TAR362G1147 Trochodendron aralioides HOM05D001261 ORTHO05D010441 6.3e-38 162.5 416 32.0
ECA246G1668 Erigeron canadensis HOM05D005510 ORTHO05D006750 3.1e-37 160.2 365 34.0
CANSAT54G2036 Cannabis sativa HOM05D008392 ORTHO05D010441 1.3e-35 154.8 316 35.1
Oeu053741.2 Olea europaea HOM05D008392 ORTHO05D010441 8.6e-35 152.1 337 34.7
Rhsim11G0096300 Rhododendron simsii HOM05D008392 ORTHO05D010441 1.1e-34 151.8 399 33.1
VMungo0720G2188 Vigna mungo HOM05D008392 ORTHO05D010441 5.6e-34 149.4 364 32.4
Prupe.6G312100 Prunus persica HOM05D008392 ORTHO05D010441 4.7e-33 146.4 326 35.6
Nitab4.5_0004525g0010 Nicotiana tabacum HOM05D008392 ORTHO05D010441 6.1e-33 146.0 402 32.8
SalBow7G4279 Salvia bowleyana HOM05D008392 ORTHO05D010441 1.8e-32 144.4 354 33.9
SGA_v2.0_scaffold4G01973 Striga asiatica HOM05D008392 ORTHO05D010441 3.0e-32 143.7 290 35.9
Nitab4.5_0001338g0070 Nicotiana tabacum HOM05D008392 ORTHO05D010441 1.2e-31 141.7 395 32.7
Phvul.007G202100 Phaseolus vulgaris HOM05D008392 ORTHO05D010441 2.0e-31 141.0 277 36.8
MD12G1204900 Malus domestica HOM05D008392 ORTHO05D010441 6.4e-30 136.0 259 37.5
QL03p014198 Quercus lobata HOM05D008392 ORTHO05D010441 3.2e-29 133.7 365 31.5
MD12G1205000 Malus domestica HOM05D008392 ORTHO05D010441 4.1e-29 133.3 303 34.3
Psat6g152920 Pisum sativum HOM05D008392 ORTHO05D010441 7.0e-29 132.5 270 35.9
RcHm_v2.0_Chr3g0457251 Rosa chinensis HOM05D008392 ORTHO05D010441 9.2e-29 132.1 365 31.5
Aqoxy2G02705 Aquilegia oxysepala HOM05D001261 ORTHO05D010441 4.6e-28 129.8 403 29.5
Lj5g0025247 Lotus japonicus HOM05D008392 ORTHO05D010441 5.9e-28 129.4 295 33.2
MD04G1192900 Malus domestica HOM05D008392 ORTHO05D010441 1.0e-27 128.6 302 33.4
Psat6g152960 Pisum sativum HOM05D008392 ORTHO05D010441 3.9e-27 126.7 312 32.4
Ca_10178_v3 Cicer arietinum L. HOM05D008392 ORTHO05D010441 1.1e-26 125.2 359 30.6
Nn5g30235 Nelumbo nucifera HOM05D001261 ORTHO05D010441 1.9e-26 124.4 401 30.4
Medtr5g080030 Medicago truncatula HOM05D008392 ORTHO05D010441 2.5e-26 124.0 258 33.3
Glyma.20G096200 Glycine max HOM05D008392 ORTHO05D010441 2.1e-25 120.9 264 32.2
Lalb_Chr19g0129211 Lupinus albus HOM05D008392 ORTHO05D010441 2.1e-25 120.9 272 34.6
Lalb_Chr06g0167451 Lupinus albus HOM05D008392 ORTHO05D010441 8.9e-24 115.5 301 32.2
arahy.Tifrunner.gnm1.ann1.S3TC9P Arachis hypogaea HOM05D008392 ORTHO05D010441 2.6e-23 114.0 293 30.0
arahy.Tifrunner.gnm1.ann1.DRX87E Arachis hypogaea HOM05D008392 ORTHO05D010441 3.4e-23 113.6 301 29.6
Lj1g0008102 Lotus japonicus HOM05D008392 ORTHO05D010441 7.5e-23 112.5 262 34.0
Medtr5g095070 Medicago truncatula HOM05D008392 ORTHO05D010441 9.8e-23 112.1 270 33.7
FAN05G3611 Fragaria x ananassa HOM05D008392 ORTHO05D010441 9.2e-21 105.5 333 28.5
FvH4_6g07580 Fragaria vesca HOM05D008392 ORTHO05D010441 2.7e-20 104.0 331 28.1
ATR0693G224 Amborella trichopoda HOM05D001261 ORTHO05D001130 1.3e-19 101.7 341 28.2
FAN14G5205 Fragaria x ananassa HOM05D001457 ORTHO05D010441 6.6e-19 99.4 340 27.6
FAN02G4301 Fragaria x ananassa HOM05D001457 ORTHO05D010441 1.5e-18 98.2 331 26.9
Psat0s3339g0160 Pisum sativum HOM05D008392 ORTHO05D010441 5.6e-18 96.3 106 45.3
Glyma.10G146432 Glycine max HOM05D008392 ORTHO05D010441 1.2e-15 88.6 93 45.2
Actinidia16864 Actinidia chinensis HOM05D008392 ORTHO05D010441 1.4e-13 81.6 249 30.9
Pp3c7_23660 Physcomitrium patens HOM05D001261 ORTHO05D001130 4.1e-13 80.1 360 25.8
Migut.B00948 Erythranthe guttata HOM05D008392 ORTHO05D010441 1.2e-12 78.6 226 29.6
CDE08G0491 Ceratophyllum demersum HOM05D008392 ORTHO05D010441 2.3e-11 74.3 84 45.2
MBI19_g03251_MAGBIO Magnolia biondii HOM05D000001 ORTHO05D000003 5.1e-11 73.2 271 29.5
Mapoly0043s0128 Marchantia polymorpha HOM05D001261 ORTHO05D001130 5.1e-11 73.2 378 25.1
TPR.G8444 Trifolium pratense HOM05D008392 ORTHO05D010441 5.1e-11 73.2 202 32.2
HanXRQChr04g0114861 Helianthus annuus HOM05D001261 ORTHO05D001130 6.6e-11 72.8 308 25.6
MSTRG.14524 Avicennia marina HOM05D001261 ORTHO05D001130 8.6e-11 72.4 285 24.9
ECA238G1605 Erigeron canadensis HOM05D001261 ORTHO05D001130 1.1e-10 72.0 314 25.5
SMO367G0512 Selaginella moellendorffii HOM05D001261 ORTHO05D001130 2.5e-10 70.9 287 24.7
SMO367G0741 Selaginella moellendorffii HOM05D001261 ORTHO05D001130 4.3e-10 70.1 273 24.2
SEGI_03044 Sequoiadendron giganteum HOM05D001261 ORTHO05D001130 1.2e-09 68.6 306 24.5
AUR62036749 Chenopodium quinoa HOM05D001261 ORTHO05D001130 2.8e-09 67.4 277 22.4
Thecc.07G001600 Theobroma cacao HOM05D001261 ORTHO05D001130 3.6e-09 67.0 280 24.3
Ciclev10008919m.g Citrus clementina HOM05D001261 ORTHO05D001130 1.8e-08 64.7 259 25.5
Cfa016960 Carpinus fangiana HOM05D001261 ORTHO05D001130 3.1e-08 63.9 296 25.0
arahy.Tifrunner.gnm1.ann1.J9QP8S Arachis hypogaea HOM05D001261 ORTHO05D001130 4.0e-08 63.5 296 24.7
Lalb_Chr18g0048641 Lupinus albus HOM05D001261 ORTHO05D001130 4.0e-08 63.5 276 24.3
SEGI_21670 Sequoiadendron giganteum HOM05D001261 ORTHO05D001130 4.0e-08 63.5 266 26.3
CSS0050103 Camellia sinensis var. sinensis HOM05D001261 ORTHO05D001130 5.2e-08 63.2 267 23.6
Cpa.g.sc12.68 Carica papaya HOM05D001261 ORTHO05D001130 1.2e-07 62.0 282 25.2
arahy.Tifrunner.gnm1.ann1.K5DIHH Arachis hypogaea HOM05D001261 ORTHO05D001130 1.5e-07 61.6 296 24.7
QL08p000529 Quercus lobata HOM05D001261 ORTHO05D001130 4.4e-07 60.1 332 23.8
SEGI_22736 Sequoiadendron giganteum HOM05D001261 ORTHO05D001130 4.4e-07 60.1 298 23.8
GSVIVG01008723001 Vitis vinifera HOM05D001261 ORTHO05D001130 4.4e-07 60.1 336 23.2
Cpa.g.sc1068.1 Carica papaya HOM05D001261 ORTHO05D001130 5.8e-07 59.7 317 24.3
MD03G1042900 Malus domestica HOM05D001261 ORTHO05D001130 7.6e-07 59.3 300 22.3
AUR62013853 Chenopodium quinoa HOM05D001261 ORTHO05D001130 9.9e-07 58.9 286 22.7
COL.COLO4_07788 Corchorus olitorius HOM05D001261 ORTHO05D001130 1.3e-06 58.5 262 23.7
MD11G1045900 Malus domestica HOM05D001261 ORTHO05D001130 1.3e-06 58.5 300 22.7
VMungo0720G0565 Vigna mungo HOM05D001261 ORTHO05D001130 1.3e-06 58.5 272 23.2
Actinidia17023 Actinidia chinensis HOM05D001261 ORTHO05D001130 1.7e-06 58.2 270 24.1
AT1G55650 Arabidopsis thaliana HOM05D001261 ORTHO05D001130 1.7e-06 58.2 284 23.9
PSO210G5207 Papaver somniferum HOM05D001261 ORTHO05D001130 1.7e-06 58.2 273 23.4
PGR031G2500 Punica granatum HOM05D001261 ORTHO05D001130 1.7e-06 58.2 276 23.6
CANSAT78G1324 Cannabis sativa HOM05D001261 ORTHO05D001130 2.2e-06 57.8 311 23.8
VMungo1309G2014 Vigna mungo HOM05D001261 ORTHO05D001130 2.2e-06 57.8 287 23.3
Nn5g30869 Nelumbo nucifera HOM05D001261 ORTHO05D001130 2.9e-06 57.4 290 21.7
Medtr3g114920 Medicago truncatula HOM05D001261 ORTHO05D001130 3.7e-06 57.0 280 22.9
PSO170G1184 Papaver somniferum HOM05D001261 ORTHO05D001130 4.9e-06 56.6 273 23.4
GSVIVG01014843001 Vitis vinifera HOM05D001261 ORTHO05D001130 4.9e-06 56.6 285 23.2
Glyma.04G020000 Glycine max HOM05D001261 ORTHO05D001130 8.4e-06 55.8 287 22.6
TPR.G16692 Trifolium pratense HOM05D001261 ORTHO05D001130 8.4e-06 55.8 274 25.2


User provided reference genes

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