Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_005420 Daucus carota HOM05D001444 ORTHO05D035009 1.3e-48 196.1 99 100.0
DCAR_017356 Daucus carota HOM05D001444 ORTHO05D003766 3.3e-47 191.4 99 98.0
Hma1.2p1_0008F-1.1_g005610 Hydrangea macrophylla HOM05D001444 ORTHO05D003766 2.5e-18 95.5 106 52.8
CSS0031861 Camellia sinensis var. sinensis HOM05D001444 ORTHO05D003766 7.9e-17 90.5 103 48.5
vmacro19754 Vaccinium macrocarpon HOM05D001444 ORTHO05D003766 1.4e-16 89.7 103 49.5
Dinv30892 Davidia involucrata HOM05D001444 ORTHO05D003766 1.1e-15 86.7 106 48.1
Nitab4.5_0000155g0060 Nicotiana tabacum HOM05D001444 ORTHO05D035009 1.5e-15 86.3 107 49.5
TAR636G1039 Trochodendron aralioides HOM05D001444 ORTHO05D003766 4.4e-15 84.7 109 46.8
Solyc10g024320.2 Solanum lycopersicum HOM05D001444 ORTHO05D003766 5.7e-15 84.3 105 50.5
Nitab4.5_0003894g0030 Nicotiana tabacum HOM05D001444 ORTHO05D003766 1.3e-14 83.2 107 47.7
Dinv24440 Davidia involucrata HOM05D001444 ORTHO05D003766 1.7e-14 82.8 106 46.2
Sopen10g009280 Solanum pennellii HOM05D001444 ORTHO05D003766 3.7e-14 81.6 105 49.5
Nn4g25600 Nelumbo nucifera HOM05D001444 ORTHO05D003766 4.8e-14 81.3 109 45.0
Cc02_g35000 Coffea canephora HOM05D001444 ORTHO05D003766 8.2e-14 80.5 105 45.7
TAR633G2402 Trochodendron aralioides HOM05D001444 ORTHO05D003766 1.8e-13 79.3 109 45.9
Oeu053708.1 Olea europaea HOM05D001444 ORTHO05D003766 2.4e-13 79.0 107 49.5
Prupe.6G313300 Prunus persica HOM05D001444 ORTHO05D003766 5.3e-13 77.8 103 46.6
Actinidia01509 Actinidia chinensis HOM05D001444 ORTHO05D003766 7.0e-13 77.4 102 47.1
Rhsim05G0131900 Rhododendron simsii HOM05D001444 ORTHO05D003766 7.0e-13 77.4 101 46.5
Nn3g21688 Nelumbo nucifera HOM05D001444 ORTHO05D003766 1.2e-12 76.6 113 46.0
Actinidia01682 Actinidia chinensis HOM05D001444 ORTHO05D003766 2.0e-12 75.9 105 47.6
Oeu064819.1 Olea europaea HOM05D001444 ORTHO05D003766 2.0e-12 75.9 108 48.1
CiPaw.07G029500 Carya illinoinensis HOM05D001444 ORTHO05D003766 2.9e-11 72.0 105 45.7
TAR365G0568 Trochodendron aralioides HOM05D001444 ORTHO05D003766 3.8e-11 71.6 104 46.2
CAN.G2431.1 Capsicum annuum HOM05D001444 ORTHO05D003766 5.5e-10 67.8 102 47.1
MD12G1206100 Malus domestica HOM05D001444 ORTHO05D003766 7.2e-10 67.4 104 44.2
ATR0796G182 Amborella trichopoda HOM05D001444 ORTHO05D003766 1.6e-09 66.2 105 41.0
GSVIVG01031236001 Vitis vinifera HOM05D001444 ORTHO05D003766 2.7e-09 65.5 104 43.3
MELO3C004189.2 Cucumis melo HOM05D001444 ORTHO05D003766 4.7e-09 64.7 104 41.3
FAN05G3889 Fragaria x ananassa HOM05D001444 ORTHO05D003766 4.7e-09 64.7 104 43.3
Sed0006327 Sechium edule HOM05D001444 ORTHO05D003766 4.7e-09 64.7 104 42.3
FAN09G2106 Fragaria x ananassa HOM05D001444 ORTHO05D003766 8.0e-09 63.9 104 43.3
CDE11G0937 Ceratophyllum demersum HOM05D001444 ORTHO05D003766 1.8e-08 62.8 106 38.7
QL03p013621 Quercus lobata HOM05D001444 ORTHO05D003766 1.8e-08 62.8 103 43.7
QL03p039871 Quercus lobata HOM05D001444 ORTHO05D003766 1.8e-08 62.8 103 43.7
FvH4_6g07420 Fragaria vesca HOM05D001444 ORTHO05D003766 2.3e-08 62.4 80 48.8
SGA_v2.0_scaffold37G14611 Striga asiatica HOM05D001444 ORTHO05D003766 2.3e-08 62.4 105 43.8
Cfa006700 Carpinus fangiana HOM05D001444 ORTHO05D003766 4.0e-08 61.6 107 44.9
Haze_04062 Corylus avellana HOM05D001444 ORTHO05D003766 4.0e-08 61.6 107 46.7
CsaV3_2G007040 Cucumis sativus L. HOM05D001444 ORTHO05D003766 4.0e-08 61.6 104 40.4
Aqoxy7G03321 Aquilegia oxysepala HOM05D001444 ORTHO05D003766 5.2e-08 61.2 108 41.7
EL10Ac4g09446 Beta vulgaris HOM05D001444 ORTHO05D003766 6.7e-08 60.8 111 38.7
ClCG00G002460 Citrullus lanatus HOM05D001444 ORTHO05D003766 6.7e-08 60.8 103 38.8
ClCG02G014960 Citrullus lanatus HOM05D001444 ORTHO05D003766 6.7e-08 60.8 103 38.8
Dinv24442 Davidia involucrata HOM05D006888 ORTHO05D008371 6.7e-08 60.8 94 38.3
MSTRG.27942 Avicennia marina HOM05D001444 ORTHO05D003766 8.8e-08 60.5 103 42.7
MD07G1050000 Malus domestica HOM05D001444 ORTHO05D003766 8.8e-08 60.5 108 43.5
FAN14G2853 Fragaria x ananassa HOM05D001444 ORTHO05D003766 1.1e-07 60.1 80 47.5
Sp2g21140 Schrenkiella parvula HOM05D001444 ORTHO05D003766 1.1e-07 60.1 104 40.4
Lsat_1_v5_gn_5_103920 Lactuca sativa HOM05D001444 ORTHO05D003766 2.0e-07 59.3 102 41.2
Sc06g0005760 Simmondsia chinensis HOM05D001444 ORTHO05D003766 2.0e-07 59.3 103 41.7
Aa31LG11G9790 Aethionema arabicum HOM05D001444 ORTHO05D003766 3.3e-07 58.5 107 40.2
MD02G1284000 Malus domestica HOM05D001444 ORTHO05D003766 3.3e-07 58.5 102 40.2
TWI56G1076 Tripterygium wilfordii HOM05D001444 ORTHO05D003766 4.4e-07 58.2 108 38.9
CANSAT54G1984 Cannabis sativa HOM05D001444 ORTHO05D003766 5.7e-07 57.8 103 40.8
Duzib177G0746 Durio zibethinus HOM05D001444 ORTHO05D003766 5.7e-07 57.8 104 40.4
PGR083G0370 Punica granatum HOM05D001444 ORTHO05D003766 9.7e-07 57.0 107 43.9
Ca_10170_v3 Cicer arietinum L. HOM05D001444 ORTHO05D003766 1.7e-06 56.2 101 39.6
Glyma.10G147200 Glycine max HOM05D001444 ORTHO05D003766 2.2e-06 55.8 69 49.3
Thecc.05G322700 Theobroma cacao HOM05D001444 ORTHO05D003766 2.2e-06 55.8 108 38.9
AT5G26860 Arabidopsis thaliana HOM05D001444 ORTHO05D003766 2.8e-06 55.5 103 37.9
Migut.N01380 Erythranthe guttata HOM05D001444 ORTHO05D003766 2.8e-06 55.5 103 40.8
arahy.Tifrunner.gnm1.ann1.06RU3W Arachis hypogaea HOM05D001444 ORTHO05D003766 6.3e-06 54.3 107 38.3
Gohir.A11G273200 Gossypium hirsutum HOM05D001444 ORTHO05D003766 6.3e-06 54.3 107 34.6
MD04G1193200 Malus domestica HOM05D001444 ORTHO05D003766 8.2e-06 53.9 102 38.2
Phvul.007G201200 Phaseolus vulgaris HOM05D001444 ORTHO05D003766 8.2e-06 53.9 69 47.8


User provided reference genes

Program Settings