Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_005399 Daucus carota HOM05D005784 ORTHO05D007803 4.4e-65 251.1 127 100.0
DCAR_002944 Daucus carota HOM05D005784 ORTHO05D007803 2.6e-49 198.7 129 84.5
DCAR_005710 Daucus carota HOM05D005784 ORTHO05D007803 9.9e-49 196.8 129 83.7
Duzib138G0454 Durio zibethinus HOM05D005784 ORTHO05D007803 4.6e-46 188.0 129 80.6
TWI59G1466 Tripterygium wilfordii HOM05D005784 ORTHO05D007803 4.6e-46 188.0 129 78.3
Duzib133G0630 Durio zibethinus HOM05D005784 ORTHO05D007803 3.0e-45 185.3 129 78.3
Thecc.01G327300 Theobroma cacao HOM05D005784 ORTHO05D007803 5.1e-45 184.5 129 76.7
COL.COLO4_23104 Corchorus olitorius HOM05D005784 ORTHO05D007803 1.5e-44 183.0 129 78.3
Gohir.A11G105900 Gossypium hirsutum HOM05D005784 ORTHO05D007803 1.5e-44 183.0 129 78.3
Gohir.D11G110800 Gossypium hirsutum HOM05D005784 ORTHO05D007803 1.5e-44 183.0 129 78.3
Gorai.007G118500 Gossypium raimondii HOM05D005784 ORTHO05D007803 1.5e-44 183.0 129 78.3
CiPaw.08G082400 Carya illinoinensis HOM05D005784 ORTHO05D007803 3.3e-44 181.8 129 76.7
PGR042G0128 Punica granatum HOM05D005784 ORTHO05D007803 4.3e-44 181.4 129 75.2
Ciclev10019335m.g Citrus clementina HOM05D005784 ORTHO05D007803 9.6e-44 180.3 129 75.2
MBI18_g03858_MAGBIO Magnolia biondii HOM05D005784 ORTHO05D007803 9.6e-44 180.3 130 75.4
Nitab4.5_0008825g0010 Nicotiana tabacum HOM05D005784 ORTHO05D007803 9.6e-44 180.3 129 76.0
GSVIVG01028229001 Vitis vinifera HOM05D005784 ORTHO05D007803 9.6e-44 180.3 129 75.2
Nitab4.5_0003092g0090 Nicotiana tabacum HOM05D005784 ORTHO05D007803 1.6e-43 179.5 124 78.2
MELO3C026475.2 Cucumis melo HOM05D005784 ORTHO05D007803 2.1e-43 179.1 126 77.0
QL09p037402 Quercus lobata HOM05D005784 ORTHO05D007803 2.1e-43 179.1 124 77.4
CsaV3_5G036980 Cucumis sativus L. HOM05D005784 ORTHO05D007803 2.8e-43 178.7 126 77.0
Peaxi162Scf00309g00620 Petunia axillaris HOM05D005784 ORTHO05D007803 2.8e-43 178.7 129 76.0
Actinidia25875 Actinidia chinensis HOM05D005784 ORTHO05D007803 3.6e-43 178.3 130 73.8
Potri.002G185400 Populus trichocarpa HOM05D005784 ORTHO05D007803 3.6e-43 178.3 129 76.0
Solyc01g068640.3 Solanum lycopersicum HOM05D005784 ORTHO05D007803 3.6e-43 178.3 129 76.0
Aqoxy5G02861 Aquilegia oxysepala HOM05D005784 ORTHO05D007803 4.8e-43 177.9 128 75.8
Sopen01g030570 Solanum pennellii HOM05D005784 ORTHO05D007803 4.8e-43 177.9 129 75.2
MD09G1291600 Malus domestica HOM05D005784 ORTHO05D007803 6.2e-43 177.6 129 75.2
Haze_05164 Corylus avellana HOM05D005784 ORTHO05D007803 8.1e-43 177.2 127 76.4
Lsat_1_v5_gn_8_167141 Lactuca sativa HOM05D005784 ORTHO05D007803 8.1e-43 177.2 127 75.6
Manes.05G007100 Manihot esculenta HOM05D005784 ORTHO05D007803 8.1e-43 177.2 124 75.8
CANSAT25G3716 Cannabis sativa HOM05D005784 ORTHO05D007803 1.4e-42 176.4 127 74.8
TAR362G0637 Trochodendron aralioides HOM05D005784 ORTHO05D007803 1.4e-42 176.4 128 74.2
TAR362G1337 Trochodendron aralioides HOM05D005784 ORTHO05D007803 1.4e-42 176.4 128 74.2
Eucgr.A00993 Eucalyptus grandis HOM05D005784 ORTHO05D007803 1.8e-42 176.0 129 73.6
CSS0010584 Camellia sinensis var. sinensis HOM05D005784 ORTHO05D007803 2.4e-42 175.6 130 72.3
Cc01_g21720 Coffea canephora HOM05D005784 ORTHO05D007803 2.4e-42 175.6 129 72.9
Cfa004924 Carpinus fangiana HOM05D000351 ORTHO05D007803 3.1e-42 175.3 127 75.6
FvH4_1g26110 Fragaria vesca HOM05D005784 ORTHO05D007803 3.1e-42 175.3 128 75.8
FAN19G2824 Fragaria x ananassa HOM05D005784 ORTHO05D007803 3.1e-42 175.3 128 75.8
Nn4g25319 Nelumbo nucifera HOM05D005784 ORTHO05D007803 3.1e-42 175.3 127 75.6
ECA236G2058 Erigeron canadensis HOM05D006834 ORTHO05D007803 5.3e-42 174.5 129 73.6
Migut.N00893 Erythranthe guttata HOM05D005784 ORTHO05D007803 5.3e-42 174.5 129 73.6
FAN23G2435 Fragaria x ananassa HOM05D005784 ORTHO05D007803 5.3e-42 174.5 126 76.2
Psat6g157920 Pisum sativum HOM05D005784 ORTHO05D007803 5.3e-42 174.5 129 74.4
Sed0007139 Sechium edule HOM05D005784 ORTHO05D007803 5.3e-42 174.5 126 74.6
PSO170G5067 Papaver somniferum HOM05D005784 ORTHO05D007803 6.9e-42 174.1 129 72.1
EL10Ac1g01825 Beta vulgaris HOM05D005784 ORTHO05D007803 1.2e-41 173.3 129 72.1
PSO357G0013 Papaver somniferum HOM05D005784 ORTHO05D007803 1.2e-41 173.3 129 72.1
Atru.chr5.839 Acer truncatum HOM05D005784 ORTHO05D007803 1.5e-41 172.9 129 73.6
Ca_10232_v3 Cicer arietinum L. HOM05D005784 ORTHO05D007803 1.5e-41 172.9 129 73.6
FAN26G0124 Fragaria x ananassa HOM05D005784 ORTHO05D007803 1.5e-41 172.9 126 76.2
RcHm_v2.0_Chr3g0485611 Rosa chinensis HOM05D005784 ORTHO05D007803 1.5e-41 172.9 126 76.2
Prupe.3G001200 Prunus persica HOM05D005784 ORTHO05D007803 2.0e-41 172.6 127 74.8
arahy.Tifrunner.gnm1.ann1.7C5766 Arachis hypogaea HOM05D005784 ORTHO05D007803 2.6e-41 172.2 130 71.5
arahy.Tifrunner.gnm1.ann1.AZ9DWX Arachis hypogaea HOM05D005784 ORTHO05D007803 2.6e-41 172.2 130 71.5
HanXRQChr06g0167951 Helianthus annuus HOM05D005784 ORTHO05D007803 2.6e-41 172.2 127 75.6
SGA_v2.0_scaffold417G51242 Striga asiatica HOM05D005784 ORTHO05D007803 2.6e-41 172.2 129 72.1
Phvul.007G208100 Phaseolus vulgaris HOM05D005784 ORTHO05D007803 3.4e-41 171.8 129 73.6
VMungo0720G0010 Vigna mungo HOM05D005784 ORTHO05D007803 4.5e-41 171.4 129 72.1
Rhsim01G0293700 Rhododendron simsii HOM05D005784 ORTHO05D007803 7.6e-41 170.6 129 71.3
TPR.G3030 Trifolium pratense HOM05D005784 ORTHO05D007803 7.6e-41 170.6 129 72.1
Lj5g0003944 Lotus japonicus HOM05D005784 ORTHO05D007803 9.9e-41 170.2 129 72.1
Glyma.10G139300 Glycine max HOM05D005784 ORTHO05D007803 1.3e-40 169.9 129 72.1
Medtr1g085610 Medicago truncatula HOM05D005784 ORTHO05D007803 1.3e-40 169.9 129 72.1
Sc05g0000040 Simmondsia chinensis HOM05D005784 ORTHO05D007803 1.3e-40 169.9 129 72.1
vmacro15092 Vaccinium macrocarpon HOM05D005784 ORTHO05D007803 1.3e-40 169.9 129 71.3
AUR62043318 Chenopodium quinoa HOM05D005784 ORTHO05D007803 1.7e-40 169.5 129 71.3
Lalb_Chr06g0167151 Lupinus albus HOM05D005784 ORTHO05D007803 1.7e-40 169.5 127 73.2
THA.LOC104815912 Tarenaya hassleriana HOM05D005784 ORTHO05D007803 2.9e-40 168.7 129 72.1
Zm00001eb340520 Zea mays HOM05D005784 ORTHO05D007803 3.8e-40 168.3 127 71.7
Glyma.02G006500 Glycine max HOM05D005784 ORTHO05D007803 4.9e-40 167.9 128 71.9
Aa31LG5G1370 Aethionema arabicum HOM05D005784 ORTHO05D007803 1.9e-39 166.0 129 69.8
Lalb_Chr02g0147261 Lupinus albus HOM05D005784 ORTHO05D007803 1.9e-39 166.0 127 71.7
MSTRG.18053 Avicennia marina HOM05D005784 ORTHO05D007803 3.2e-39 165.2 129 71.3
SEGI_05697 Sequoiadendron giganteum HOM05D005784 ORTHO05D007803 7.1e-39 164.1 118 72.9
HPP92_016969 Vanilla planifolia HOM05D005784 ORTHO05D007803 7.1e-39 164.1 130 69.2
HPP92_017034 Vanilla planifolia HOM05D005784 ORTHO05D007803 7.1e-39 164.1 130 69.2
ATR0693G326 Amborella trichopoda HOM05D005784 ORTHO05D007803 1.6e-38 162.9 123 74.0
Aqoxy2G02413 Aquilegia oxysepala HOM05D005784 ORTHO05D007803 1.6e-38 162.9 124 74.2
CDE09G0629 Ceratophyllum demersum HOM05D005784 ORTHO05D007803 2.1e-38 162.5 127 68.5
unitig_90.g27449 Utricularia gibba HOM05D001090 ORTHO05D007803 2.1e-38 162.5 124 70.2
CARHR250010 Cardamine hirsuta HOM05D005784 ORTHO05D007803 6.0e-38 161.0 129 69.0
AT4G01660 Arabidopsis thaliana HOM05D005784 ORTHO05D007803 7.9e-38 160.6 129 69.0
Carub.0006s3555 Capsella rubella HOM05D005784 ORTHO05D007803 1.8e-37 159.5 129 69.0
FAN28G2925 Fragaria x ananassa HOM05D005784 ORTHO05D007803 1.8e-37 159.5 111 80.2
A09p01190 Brassica napus HOM05D005784 ORTHO05D007803 3.0e-37 158.7 129 68.2
BraA09t35789Z Brassica rapa HOM05D005784 ORTHO05D007803 3.0e-37 158.7 129 68.2
Thhalv10028510m.g Eutrema salsugineum HOM05D005784 ORTHO05D007803 3.0e-37 158.7 129 68.2
AL6G51690 Arabidopsis lyrata HOM05D005784 ORTHO05D007803 3.9e-37 158.3 129 68.2
BcaB01g02124 Brassica carinata HOM05D005784 ORTHO05D007803 5.1e-37 157.9 129 67.4
BcaC04g24079 Brassica carinata HOM05D005784 ORTHO05D007803 1.5e-36 156.4 129 67.4
C09p01280 Brassica napus HOM05D005784 ORTHO05D007803 1.5e-36 156.4 129 67.4
BolC9t53062H Brassica oleracea HOM05D005784 ORTHO05D007803 1.5e-36 156.4 129 67.4
Sp6g01550 Schrenkiella parvula HOM05D005784 ORTHO05D007803 1.5e-36 156.4 129 66.7
Mapoly0064s0089 Marchantia polymorpha HOM05D005784 ORTHO05D007803 1.8e-34 149.4 118 66.1
Dinv12073 Davidia involucrata HOM05D005784 ORTHO05D007803 6.9e-34 147.5 106 72.6
Migut.D00007 Erythranthe guttata HOM05D005784 ORTHO05D007803 1.7e-32 142.9 101 78.2
AagrBONN_evm.TU.Sc2ySwM_228.4566 Anthoceros agrestis HOM05D005784 ORTHO05D007803 3.2e-31 138.7 121 62.8
Migut.N00895 Erythranthe guttata HOM05D005784 ORTHO05D007803 4.2e-31 138.3 130 60.8
SMO146G0128 Selaginella moellendorffii HOM05D005784 ORTHO05D007803 9.3e-31 137.1 115 64.3
ClCG11G000360 Citrullus lanatus HOM05D005784 ORTHO05D007803 1.2e-30 136.7 121 65.3
Pp3c6_18430 Physcomitrium patens HOM05D005784 ORTHO05D007803 4.6e-30 134.8 118 61.9
Cre10.g429800 Chlamydomonas reinhardtii HOM05D005784 ORTHO05D007803 1.8e-26 122.9 112 60.7
Oeu052593.2 Olea europaea HOM05D005784 ORTHO05D007803 1.0e-24 117.1 284 34.5
CDE09G1340 Ceratophyllum demersum HOM05D005784 ORTHO05D007803 2.5e-23 112.5 99 62.6
CSS0010884 Camellia sinensis var. sinensis HOM05D005784 ORTHO05D019705 3.2e-23 112.1 144 47.9
CAN.G179.27 Capsicum annuum HOM05D005784 ORTHO05D007803 2.1e-22 109.4 78 75.6
Cpa.g.sc57.41 Carica papaya HOM05D005784 ORTHO05D007803 2.1e-22 109.4 78 79.5
MCO09G446 Micromonas commoda HOM05D005784 ORTHO05D007803 1.1e-20 103.6 122 50.8
CSS0039748 Camellia sinensis var. sinensis HOM05D005784 ORTHO05D019705 1.5e-20 103.2 134 49.3
SHI19972 Sapria himalayana HOM05D005784 ORTHO05D000023 1.5e-20 103.2 147 44.2
AUR62035184 Chenopodium quinoa HOM05D005784 ORTHO05D007803 4.3e-20 101.7 78 71.8
Haze_26301 Corylus avellana HOM05D005784 ORTHO05D007803 8.2e-19 97.4 122 43.4
PRCOL_00004655 Prasinoderma coloniale HOM05D005784 ORTHO05D007803 6.9e-18 94.4 121 46.3
Cfa022580 Carpinus fangiana HOM05D005784 ORTHO05D007803 2.9e-16 89.0 112 50.0
Migut.N00894 Erythranthe guttata HOM05D005784 ORTHO05D007803 8.8e-13 77.4 75 56.0
Cpa.g.sc57.42 Carica papaya HOM05D005784 ORTHO05D007803 1.1e-12 77.0 51 74.5
CSS0041482 Camellia sinensis var. sinensis HOM05D005784 ORTHO05D019705 2.5e-12 75.9 123 41.5
CBR_g37217 Chara braunii HOM05D005784 ORTHO05D007803 3.3e-12 75.5 125 40.0
CBR_g4189 Chara braunii HOM05D003482 ORTHO05D004194 7.9e-06 54.3 108 33.3


User provided reference genes

Program Settings