Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_005393 Daucus carota HOM05D006438 ORTHO05D007998 0.0e+00 1244.6 645 100.0
Dinv32596 Davidia involucrata HOM05D006438 ORTHO05D007998 6.4e-261 904.0 649 73.7
Lj7A500T115 Lonicera japonica HOM05D006438 ORTHO05D007998 3.0e-250 868.6 657 69.7
Actinidia20246 Actinidia chinensis HOM05D006438 ORTHO05D007998 6.2e-248 860.9 650 70.8
CiPaw.02G041100 Carya illinoinensis HOM05D006438 ORTHO05D007998 2.4e-244 849.0 650 69.7
QL06p050047 Quercus lobata HOM05D006438 ORTHO05D007998 1.6e-243 846.3 651 69.4
QL11p022848 Quercus lobata HOM05D006438 ORTHO05D007998 8.7e-242 840.5 651 68.8
CSS0029538 Camellia sinensis var. sinensis HOM05D006438 ORTHO05D007998 9.6e-241 837.0 649 69.0
vmacro13165 Vaccinium macrocarpon HOM05D006438 ORTHO05D007998 1.6e-240 836.3 655 68.9
CSS0017951 Camellia sinensis var. sinensis HOM05D006438 ORTHO05D007998 6.2e-240 834.3 649 68.7
Prupe.2G189300 Prunus persica HOM05D006438 ORTHO05D007998 2.2e-237 825.9 652 67.5
Manes.13G078900 Manihot esculenta HOM05D006438 ORTHO05D007998 2.9e-237 825.5 643 68.6
MSTRG.17348 Avicennia marina HOM05D006438 ORTHO05D007998 8.4e-237 823.9 656 66.0
Cfa003796 Carpinus fangiana HOM05D006438 ORTHO05D007998 1.9e-233 812.8 651 67.9
Migut.B01878 Erythranthe guttata HOM05D006438 ORTHO05D007998 2.4e-231 805.8 662 66.0
Haze_15664 Corylus avellana HOM05D006438 ORTHO05D007998 9.0e-231 803.9 651 66.8
GSVIVG01027157001 Vitis vinifera HOM05D006438 ORTHO05D007998 1.7e-229 799.7 649 67.0
Rhsim07G0003900 Rhododendron simsii HOM05D006438 ORTHO05D007998 2.2e-229 799.3 653 66.8
Potri.002G171600 Populus trichocarpa HOM05D006438 ORTHO05D007998 3.5e-227 792.0 652 66.4
Manes.13G077643 Manihot esculenta HOM05D006438 ORTHO05D007998 2.3e-226 789.3 643 66.3
PGSC0003DMG400000230 Solanum tuberosum HOM05D006438 ORTHO05D007998 2.3e-226 789.3 670 63.4
FAN03G1123 Fragaria x ananassa HOM05D006438 ORTHO05D007998 3.9e-226 788.5 650 65.4
FvH4_7g16650 Fragaria vesca HOM05D006438 ORTHO05D007998 1.1e-225 786.9 649 65.2
Duzib138G1266 Durio zibethinus HOM05D006438 ORTHO05D007998 3.3e-225 785.4 673 63.6
Sopen01g039750 Solanum pennellii HOM05D006438 ORTHO05D007998 3.3e-225 785.4 670 63.7
FAN10G0107 Fragaria x ananassa HOM05D006438 ORTHO05D007998 7.4e-225 784.3 650 64.6
FAN10G3447 Fragaria x ananassa HOM05D006438 ORTHO05D007998 1.3e-224 783.5 648 64.7
RcHm_v2.0_Chr1g0359811 Rosa chinensis HOM05D006438 ORTHO05D007998 6.2e-224 781.2 664 63.6
TWI59G0942 Tripterygium wilfordii HOM05D006438 ORTHO05D007998 1.4e-223 780.0 652 64.3
Solyc01g096030.4 Solanum lycopersicum HOM05D006438 ORTHO05D007998 1.8e-223 779.6 672 63.5
Hund27192 Selenicereus undatus HOM05D006438 ORTHO05D007998 3.1e-223 778.9 671 63.6
Gohir.A08G125100 Gossypium hirsutum HOM05D006438 ORTHO05D007998 2.6e-222 775.8 673 62.7
CAN.G1415.26 Capsicum annuum HOM05D006438 ORTHO05D007998 1.7e-221 773.1 670 62.7
Thecc.01G341800 Theobroma cacao HOM05D006438 ORTHO05D007998 6.5e-221 771.2 677 62.6
Ciclev10019221m.g Citrus clementina HOM05D006438 ORTHO05D007998 8.4e-221 770.8 657 64.4
EL10Ac1g00261 Beta vulgaris HOM05D006438 ORTHO05D007998 4.2e-220 768.5 668 62.9
Phvul.006G113600 Phaseolus vulgaris HOM05D006438 ORTHO05D007998 4.2e-220 768.5 644 63.4
Sabra14G0072800 Salix brachista HOM05D006438 ORTHO05D007998 9.3e-220 767.3 648 65.3
Cpa.g.sc96.25 Carica papaya HOM05D006438 ORTHO05D007998 1.2e-219 766.9 651 65.0
Nn3g18981 Nelumbo nucifera HOM05D006438 ORTHO05D007998 1.2e-219 766.9 646 64.1
MD07G1150500 Malus domestica HOM05D006438 ORTHO05D007998 2.1e-219 766.1 646 62.5
Peaxi162Scf00786g00012 Petunia axillaris HOM05D006438 ORTHO05D007998 6.0e-219 764.6 670 62.4
Glyma.03G257800 Glycine max HOM05D006438 ORTHO05D007998 1.3e-218 763.5 647 64.1
Nitab4.5_0013402g0010 Nicotiana tabacum HOM05D006438 ORTHO05D007998 1.8e-218 763.1 672 61.9
SGA_v2.0_scaffold5G03022 Striga asiatica HOM05D006438 ORTHO05D007998 6.7e-218 761.1 656 62.0
Nitab4.5_0000172g0480 Nicotiana tabacum HOM05D006438 ORTHO05D007998 8.7e-218 760.8 671 62.3
SalBow3G2635 Salvia bowleyana HOM05D006438 ORTHO05D007998 1.9e-217 759.6 655 61.5
Ca_09510_v3 Cicer arietinum L. HOM05D006438 ORTHO05D007998 7.4e-217 757.7 660 63.0
Ca_30059_v3 Cicer arietinum L. HOM05D006438 ORTHO05D007998 7.4e-217 757.7 660 63.0
MD01G1082100 Malus domestica HOM05D006438 ORTHO05D007998 7.4e-217 757.7 652 62.3
Glyma.19G256300 Glycine max HOM05D006438 ORTHO05D007998 1.3e-216 756.9 649 63.8
Sc23g0002070 Simmondsia chinensis HOM05D006438 ORTHO05D007998 3.7e-216 755.4 679 61.3
Lalb_Chr18g0044491 Lupinus albus HOM05D006438 ORTHO05D007998 8.2e-216 754.2 655 63.2
Gorai.004G151600 Gossypium raimondii HOM05D006438 ORTHO05D007998 1.2e-214 750.4 664 62.0
Gohir.D08G146100 Gossypium hirsutum HOM05D006438 ORTHO05D007998 1.5e-214 750.0 664 61.7
CANSAT56G2224 Cannabis sativa HOM05D006438 ORTHO05D007998 5.9e-214 748.0 657 62.7
Nn1g00253 Nelumbo nucifera HOM05D006438 ORTHO05D007998 2.2e-213 746.1 640 63.3
Lj1g0004073 Lotus japonicus HOM05D006438 ORTHO05D007998 2.9e-213 745.7 658 62.9
FAN01G1234 Fragaria x ananassa HOM05D006438 ORTHO05D007998 1.1e-212 743.8 650 62.2
VMungo0540G1767 Vigna mungo HOM05D006438 ORTHO05D007998 1.9e-212 743.0 650 61.4
PSO170G3726 Papaver somniferum HOM05D006438 ORTHO05D007998 3.9e-210 735.3 639 60.9
AUR62023453 Chenopodium quinoa HOM05D006438 ORTHO05D007998 5.1e-210 734.9 669 59.9
ECA236G2598 Erigeron canadensis HOM05D006438 ORTHO05D007998 6.7e-210 734.6 651 62.1
PSO063G1116 Papaver somniferum HOM05D006438 ORTHO05D007998 3.7e-208 728.8 640 60.6
Eucgr.A01924 Eucalyptus grandis HOM05D006438 ORTHO05D007998 2.4e-207 726.1 649 59.8
HanXRQChr04g0120541 Helianthus annuus HOM05D006438 ORTHO05D007998 4.5e-206 721.8 648 62.3
TPR.G4682 Trifolium pratense HOM05D006438 ORTHO05D007998 7.7e-206 721.1 631 61.8
Ah.05g179490 Amaranthus hybridus HOM05D006438 ORTHO05D007998 1.9e-204 716.5 668 59.1
Psat3g002440 Pisum sativum HOM05D006438 ORTHO05D007998 1.1e-201 707.2 657 59.5
COL.COLO4_06280 Corchorus olitorius HOM05D006438 ORTHO05D007998 1.3e-200 703.7 603 63.7
ClCG06G001260 Citrullus lanatus HOM05D006438 ORTHO05D007998 3.7e-200 702.2 651 59.1
PGR031G2090 Punica granatum HOM05D006438 ORTHO05D007998 1.1e-199 700.7 648 60.3
MELO3C022408.2 Cucumis melo HOM05D006438 ORTHO05D007998 1.2e-198 697.2 654 59.8
MBI07_g40678_MAGBIO Magnolia biondii HOM05D006438 ORTHO05D007998 2.9e-197 692.6 652 59.2
arahy.Tifrunner.gnm1.ann1.TZA1ET Arachis hypogaea HOM05D006438 ORTHO05D007998 3.8e-197 692.2 627 60.6
Medtr7g117420 Medicago truncatula HOM05D006438 ORTHO05D007998 3.8e-197 692.2 625 60.3
Potri.014G099300 Populus trichocarpa HOM05D006438 ORTHO05D007998 3.8e-197 692.2 578 65.4
THA.LOC104817364 Tarenaya hassleriana HOM05D006438 ORTHO05D007998 7.9e-195 684.5 666 57.4
arahy.Tifrunner.gnm1.ann1.QN4XTT Arachis hypogaea HOM05D006438 ORTHO05D007998 5.2e-194 681.8 633 60.0
CsaV3_6G007190 Cucumis sativus L. HOM05D006438 ORTHO05D007998 2.0e-193 679.9 654 58.4
Lsat_1_v5_gn_7_1020 Lactuca sativa HOM05D006438 ORTHO05D007998 2.4e-191 672.9 665 60.5
Aa31LG10G15790 Aethionema arabicum HOM05D006438 ORTHO05D007998 1.9e-188 663.3 650 57.4
Aqoxy5G04279 Aquilegia oxysepala HOM05D006438 ORTHO05D007998 7.2e-188 661.4 647 56.1
Sed0005284 Sechium edule HOM05D006438 ORTHO05D007998 2.3e-186 656.4 633 58.5
ATR0602G124 Amborella trichopoda HOM05D006438 ORTHO05D007998 3.8e-181 639.0 665 54.4
AL5G44360 Arabidopsis lyrata HOM05D006438 ORTHO05D007998 7.2e-180 634.8 671 55.1
Actinidia10144 Actinidia chinensis HOM05D006438 ORTHO05D007998 8.0e-179 631.3 471 69.0
AUR62004500 Chenopodium quinoa HOM05D006438 ORTHO05D007998 2.6e-177 626.3 655 55.0
HPP92_008818 Vanilla planifolia HOM05D006438 ORTHO05D007998 1.3e-176 624.0 676 52.2
Sp5g01570 Schrenkiella parvula HOM05D006438 ORTHO05D007998 1.2e-174 617.5 672 53.3
Thhalv10005821m.g Eutrema salsugineum HOM05D006438 ORTHO05D007998 1.6e-174 617.1 671 53.4
Carub.0005s2854 Capsella rubella HOM05D006438 ORTHO05D007998 8.6e-173 611.3 671 53.1
CARHR172130 Cardamine hirsuta HOM05D006438 ORTHO05D007998 1.9e-172 610.1 677 51.8
unitig_37.g12626 Utricularia gibba HOM05D006438 ORTHO05D007998 2.5e-172 609.8 614 57.0
BraA07t30216Z Brassica rapa HOM05D006438 ORTHO05D007998 3.2e-172 609.4 671 53.1
A07p25760 Brassica napus HOM05D006438 ORTHO05D007998 1.6e-171 607.1 671 52.8
AT3G61800 Arabidopsis thaliana HOM05D006438 ORTHO05D007998 8.0e-171 604.7 672 53.0
BolC6t37959H Brassica oleracea HOM05D006438 ORTHO05D007998 8.0e-171 604.7 667 53.1
C06p27980 Brassica napus HOM05D006438 ORTHO05D007998 2.0e-169 600.1 667 52.5
Dinv35119 Davidia involucrata HOM05D006438 ORTHO05D007998 3.2e-143 513.1 659 49.0
Mapoly0002s0048 Marchantia polymorpha HOM05D006438 ORTHO05D007998 4.6e-134 482.6 676 43.0
SEGI_11798 Sequoiadendron giganteum HOM05D006438 ORTHO05D007998 1.9e-132 477.2 692 42.8
Zm00001eb378420 Zea mays HOM05D006438 ORTHO05D007998 4.7e-131 472.6 626 46.6
Cc10_g13840 Coffea canephora HOM05D006438 ORTHO05D007998 1.6e-126 457.6 373 66.5
Atru.chr5.676 Acer truncatum HOM05D006438 ORTHO05D007998 3.3e-124 449.9 307 77.9
BcaC08g45166 Brassica carinata HOM05D006438 ORTHO05D007998 3.6e-123 446.4 559 47.9
Pp3c3_31410 Physcomitrium patens HOM05D006438 ORTHO05D007998 3.1e-122 443.4 705 39.1
SMO365G0083 Selaginella moellendorffii HOM05D006438 ORTHO05D007998 1.2e-113 414.8 644 39.1
CDE08G0794 Ceratophyllum demersum HOM05D006438 ORTHO05D007998 1.3e-104 384.8 359 57.7
SHI13317 Sapria himalayana HOM05D006438 ORTHO05D007998 1.3e-104 384.8 339 59.6
BcaC08g45168 Brassica carinata HOM05D006438 ORTHO05D007998 1.9e-100 370.9 310 64.2
Atru.chr5.675 Acer truncatum HOM05D006438 ORTHO05D007998 3.9e-77 293.5 244 65.6
AagrBONN_evm.TU.Sc2ySwM_368.299 Anthoceros agrestis HOM05D006438 ORTHO05D007998 5.2e-77 293.1 606 33.5
BcaC08g45167 Brassica carinata HOM05D006438 ORTHO05D007998 3.1e-50 204.1 244 51.2
C08p42400 Brassica napus HOM05D006438 ORTHO05D007998 5.4e-42 176.8 341 37.8
SEGI_17110 Sequoiadendron giganteum HOM05D006438 ORTHO05D007998 3.0e-40 171.0 219 42.5
BraA06t25827Z Brassica rapa HOM05D006438 ORTHO05D007998 2.5e-39 167.9 281 40.2
Sabra02G0141200 Salix brachista HOM05D006438 ORTHO05D007998 5.6e-31 140.2 355 31.0
SEGI_37113 Sequoiadendron giganteum HOM05D006438 ORTHO05D007998 2.2e-19 101.7 177 34.5
Aa31sc496G10 Aethionema arabicum HOM05D006438 ORTHO05D007998 2.0e-12 78.6 118 44.1
Zm00001eb167390 Zea mays HOM05D006438 ORTHO05D007998 3.4e-12 77.8 90 47.8
MCO15G002 Micromonas commoda HOM05D006438 ORTHO05D007998 5.1e-08 63.9 226 28.3


User provided reference genes

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