Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_005380 Daucus carota HOM05D001772 ORTHO05D008903 7.7e-297 1023.1 526 100.0
Dinv18731 Davidia involucrata HOM05D001772 ORTHO05D008903 8.0e-153 544.7 528 54.0
CSS0012714 Camellia sinensis var. sinensis HOM05D001772 ORTHO05D008903 2.1e-145 520.0 528 52.1
Manes.05G024600 Manihot esculenta HOM05D001772 ORTHO05D008903 1.0e-144 517.7 530 52.8
vmacro13174 Vaccinium macrocarpon HOM05D001772 ORTHO05D008903 2.6e-143 513.1 529 52.4
Cc02_g39160 Coffea canephora HOM05D001772 ORTHO05D008903 4.9e-142 508.8 486 54.1
TAR375G0197 Trochodendron aralioides HOM05D001772 ORTHO05D008903 4.9e-142 508.8 530 51.7
QL04p013773 Quercus lobata HOM05D001772 ORTHO05D008903 8.3e-142 508.1 526 51.9
SalBow5G1378 Salvia bowleyana HOM05D001772 ORTHO05D008903 1.1e-141 507.7 541 50.5
Lsat_1_v5_gn_3_139600 Lactuca sativa HOM05D001772 ORTHO05D008903 1.4e-141 507.3 533 53.3
HanXRQChr11g0353031 Helianthus annuus HOM05D001772 ORTHO05D008903 2.4e-141 506.5 515 52.6
GSVIVG01027076001 Vitis vinifera HOM05D001772 ORTHO05D008903 4.1e-141 505.8 532 51.1
Migut.N01555 Erythranthe guttata HOM05D001772 ORTHO05D008903 7.8e-140 501.5 529 50.5
MD07G1147600 Malus domestica HOM05D001772 ORTHO05D008903 3.9e-139 499.2 527 52.0
Thecc.01G344900 Theobroma cacao HOM05D001772 ORTHO05D008903 5.0e-139 498.8 538 50.4
Prupe.2G185600 Prunus persica HOM05D001772 ORTHO05D008903 2.5e-138 496.5 528 51.9
Cfa003819 Carpinus fangiana HOM05D001772 ORTHO05D008903 4.3e-138 495.7 522 51.3
Gohir.D12G114800 Gossypium hirsutum HOM05D001772 ORTHO05D008903 8.1e-137 491.5 526 49.6
Gohir.A12G111500 Gossypium hirsutum HOM05D001772 ORTHO05D008903 1.8e-136 490.3 526 49.4
RcHm_v2.0_Chr1g0359211 Rosa chinensis HOM05D001772 ORTHO05D008903 3.1e-136 489.6 528 51.1
FvH4_7g16200 Fragaria vesca HOM05D001772 ORTHO05D008903 4.0e-136 489.2 528 50.9
MBI06_g46729_MAGBIO Magnolia biondii HOM05D001772 ORTHO05D008903 5.2e-136 488.8 476 54.4
Aqoxy7G00133 Aquilegia oxysepala HOM05D001772 ORTHO05D008903 6.8e-136 488.4 535 50.1
Gorai.008G124300 Gossypium raimondii HOM05D001772 ORTHO05D008903 6.8e-136 488.4 526 49.0
Oeu007903.1 Olea europaea HOM05D001772 ORTHO05D008903 8.9e-136 488.0 533 50.5
Ciclev10020231m.g Citrus clementina HOM05D001772 ORTHO05D008903 1.2e-135 487.6 530 50.2
TWI59G0809 Tripterygium wilfordii HOM05D001772 ORTHO05D008903 3.4e-135 486.1 527 50.1
CAN.G239.5 Capsicum annuum HOM05D001772 ORTHO05D008903 5.8e-135 485.3 533 49.3
Duzib138G1524 Durio zibethinus HOM05D001772 ORTHO05D008903 7.5e-135 485.0 455 53.2
Sopen05g028720 Solanum pennellii HOM05D001772 ORTHO05D008903 1.3e-134 484.2 537 50.1
Rhsim07G0005700 Rhododendron simsii HOM05D001772 ORTHO05D008903 1.7e-134 483.8 527 49.5
SGA_v2.0_scaffold11G05728 Striga asiatica HOM05D001772 ORTHO05D008903 2.2e-134 483.4 538 49.3
Potri.014G096700 Populus trichocarpa HOM05D001772 ORTHO05D008903 2.9e-134 483.0 531 51.0
Aa31LG5G920 Aethionema arabicum HOM05D001772 ORTHO05D008903 4.9e-134 482.3 536 47.9
PGSC0003DMG402033880 Solanum tuberosum HOM05D001772 ORTHO05D008903 4.9e-134 482.3 455 54.3
Atru.chr5.644 Acer truncatum HOM05D001772 ORTHO05D008903 1.1e-133 481.1 532 49.6
AT4G01040 Arabidopsis thaliana HOM05D001772 ORTHO05D008903 2.4e-133 479.9 482 48.8
MD01G1078600 Malus domestica HOM05D001772 ORTHO05D008903 3.2e-133 479.6 531 50.3
CANSAT56G1679 Cannabis sativa HOM05D001772 ORTHO05D008903 1.2e-132 477.6 538 50.2
COL.COLO4_06307 Corchorus olitorius HOM05D001772 ORTHO05D008903 4.6e-132 475.7 527 48.4
Medtr5g025480 Medicago truncatula HOM05D001772 ORTHO05D008903 4.6e-132 475.7 529 48.8
Eucgr.E00067 Eucalyptus grandis HOM05D001772 ORTHO05D008903 6.0e-132 475.3 532 50.2
THA.LOC104825876 Tarenaya hassleriana HOM05D001772 ORTHO05D008903 6.0e-132 475.3 510 49.0
Nn3g19051 Nelumbo nucifera HOM05D001772 ORTHO05D008903 1.7e-131 473.8 522 50.0
PSO135G0498 Papaver somniferum HOM05D001772 ORTHO05D008903 2.3e-131 473.4 479 50.7
VMungo0540G0918 Vigna mungo HOM05D001772 ORTHO05D008903 3.0e-131 473.0 474 51.9
TPR.G8988 Trifolium pratense HOM05D001772 ORTHO05D008903 6.6e-131 471.9 531 48.4
Solyc05g050320.4 Solanum lycopersicum HOM05D001772 ORTHO05D008903 8.6e-131 471.5 445 53.7
ClCG05G000920 Citrullus lanatus HOM05D001772 ORTHO05D008903 1.5e-130 470.7 529 49.5
FAN03G0169 Fragaria x ananassa HOM05D001772 ORTHO05D008903 1.9e-130 470.3 531 50.1
Lalb_Chr04g0261581 Lupinus albus HOM05D001772 ORTHO05D008903 2.5e-130 469.9 444 53.4
Ca_25036_v3 Cicer arietinum L. HOM05D001772 ORTHO05D008903 5.6e-130 468.8 531 48.2
FAN01G1646 Fragaria x ananassa HOM05D001772 ORTHO05D008903 5.6e-130 468.8 526 49.6
arahy.Tifrunner.gnm1.ann1.NY4TXX Arachis hypogaea HOM05D001772 ORTHO05D008903 7.3e-130 468.4 455 52.3
Carub.0006s3610 Capsella rubella HOM05D001772 ORTHO05D008903 7.3e-130 468.4 531 46.0
PSO384G4631 Papaver somniferum HOM05D001772 ORTHO05D008903 7.3e-130 468.4 479 50.7
CARHR249250 Cardamine hirsuta HOM05D001772 ORTHO05D008903 1.2e-129 467.6 535 47.5
Sp6g01100 Schrenkiella parvula HOM05D001772 ORTHO05D008903 1.6e-129 467.2 529 46.7
PGR042G2345 Punica granatum HOM05D001772 ORTHO05D008903 2.1e-129 466.8 530 48.3
EL10Ac1g00295 Beta vulgaris HOM05D001772 ORTHO05D008903 8.1e-129 464.9 528 47.7
Thhalv10028671m.g Eutrema salsugineum HOM05D001772 ORTHO05D008903 8.1e-129 464.9 484 49.0
Peaxi162Scf00403g00519 Petunia axillaris HOM05D001772 ORTHO05D008903 8.1e-129 464.9 517 49.1
arahy.Tifrunner.gnm1.ann1.HV5NER Arachis hypogaea HOM05D001772 ORTHO05D008903 1.1e-128 464.5 455 52.1
CANSAT56G1036 Cannabis sativa HOM05D001772 ORTHO05D008903 1.1e-128 464.5 526 50.2
Sabra14G0070800 Salix brachista HOM05D001772 ORTHO05D008903 2.3e-128 463.4 521 50.3
FAN10G2954 Fragaria x ananassa HOM05D001772 ORTHO05D008903 4.0e-128 462.6 483 51.6
Lj9A595T55 Lonicera japonica HOM05D001772 ORTHO05D008903 4.0e-128 462.6 411 56.9
CSS0002891 Camellia sinensis var. sinensis HOM05D001772 ORTHO05D008903 6.8e-128 461.8 493 50.1
FAN06G2365 Fragaria x ananassa HOM05D001772 ORTHO05D008903 1.2e-127 461.1 522 49.2
C03p38820 Brassica napus HOM05D001772 ORTHO05D008903 1.7e-126 457.2 524 46.8
BraA03t12356Z Brassica rapa HOM05D001772 ORTHO05D008903 1.7e-126 457.2 524 46.9
Sed0004684 Sechium edule HOM05D001772 ORTHO05D008903 2.9e-126 456.4 481 50.1
Lj1g0009750 Lotus japonicus HOM05D001772 ORTHO05D008903 3.7e-126 456.1 519 49.1
BcaC01g06839 Brassica carinata HOM05D001772 ORTHO05D008903 4.9e-126 455.7 525 46.3
FAN06G4998 Fragaria x ananassa HOM05D001772 ORTHO05D008903 4.9e-126 455.7 518 49.2
A03p31810 Brassica napus HOM05D001772 ORTHO05D008903 6.4e-126 455.3 524 46.8
BolC3t16157H Brassica oleracea HOM05D001772 ORTHO05D008903 6.4e-126 455.3 524 46.6
CsaV3_3G008150 Cucumis sativus L. HOM05D001772 ORTHO05D008903 6.4e-126 455.3 527 47.6
Haze_15635 Corylus avellana HOM05D001772 ORTHO05D008903 1.4e-125 454.1 544 48.2
Psat2g145680 Pisum sativum HOM05D001772 ORTHO05D008903 2.4e-125 453.4 531 46.9
Sc01g0002840 Simmondsia chinensis HOM05D001772 ORTHO05D008903 4.1e-125 452.6 528 47.5
BcaB01g02345 Brassica carinata HOM05D001772 ORTHO05D008903 7.1e-125 451.8 524 46.6
AUR62023481 Chenopodium quinoa HOM05D001772 ORTHO05D008903 2.3e-123 446.8 531 46.5
AUR62004469 Chenopodium quinoa HOM05D001772 ORTHO05D008903 3.3e-122 443.0 531 46.0
Glyma.03G256800 Glycine max HOM05D001772 ORTHO05D008903 7.3e-122 441.8 518 48.1
Ah.05g179760 Amaranthus hybridus HOM05D001772 ORTHO05D008903 3.1e-120 436.4 531 44.6
Phvul.006G111900 Phaseolus vulgaris HOM05D001772 ORTHO05D008903 2.6e-119 433.3 411 54.5
ECA240G4072 Erigeron canadensis HOM05D001772 ORTHO05D008903 1.3e-118 431.0 438 52.1
Hund27212 Selenicereus undatus HOM05D001772 ORTHO05D008903 3.2e-117 426.4 566 43.5
CDE10G0091 Ceratophyllum demersum HOM05D001772 ORTHO05D008903 4.2e-117 426.0 522 46.2
Nitab4.5_0000258g0130 Nicotiana tabacum HOM05D001772 ORTHO05D008903 9.3e-117 424.9 524 46.8
Zm00001eb358410 Zea mays HOM05D001772 ORTHO05D008903 2.6e-111 406.8 521 44.0
MELO3C006034.2 Cucumis melo HOM05D001772 ORTHO05D008903 1.3e-110 404.4 528 45.6
HPP92_005515 Vanilla planifolia HOM05D001772 ORTHO05D008903 6.0e-108 395.6 518 44.2
Cpa.g.sc273.9 Carica papaya HOM05D001772 ORTHO05D008903 6.9e-96 355.5 441 45.8
SEGI_01392 Sequoiadendron giganteum HOM05D001772 ORTHO05D008903 1.9e-85 320.9 421 41.6
Pp3c22_2040 Physcomitrium patens HOM05D001772 ORTHO05D008903 7.9e-84 315.5 456 37.9
AL6G52340 Arabidopsis lyrata HOM05D001772 ORTHO05D008903 1.1e-80 305.1 343 45.2
AagrBONN_evm.TU.Sc2ySwM_344.1652 Anthoceros agrestis HOM05D001772 ORTHO05D008903 1.5e-74 284.6 509 34.8
Mapoly0102s0038 Marchantia polymorpha HOM05D001772 ORTHO05D008903 2.0e-71 274.2 430 36.7
SMO167G0031 Selaginella moellendorffii HOM05D001772 ORTHO05D008903 1.1e-69 268.5 424 37.0
SMO347G0199 Selaginella moellendorffii HOM05D001772 ORTHO05D008903 1.1e-69 268.5 425 37.2
CiPaw.01G074400 Carya illinoinensis HOM05D001772 ORTHO05D008903 1.4e-67 261.5 239 58.2
Actinidia10113 Actinidia chinensis HOM05D001772 ORTHO05D008903 1.8e-67 261.2 367 42.2
CBR_g3968 Chara braunii HOM05D001772 ORTHO05D008903 5.3e-64 249.6 492 32.7
Nitab4.5_0004506g0060 Nicotiana tabacum HOM05D001772 ORTHO05D008903 3.6e-60 236.9 527 32.8
Cre03.g200650 Chlamydomonas reinhardtii HOM05D001772 ORTHO05D008903 5.0e-46 189.9 475 26.3
ATR0589G019 Amborella trichopoda HOM05D001772 ORTHO05D008903 3.1e-40 170.6 272 38.6
Os01g0619800 Oryza sativa ssp. japonica HOM05D001772 ORTHO05D008903 1.6e-39 168.3 131 63.4
Nitab4.5_0015177g0010 Nicotiana tabacum HOM05D001772 ORTHO05D000634 3.0e-35 154.1 123 62.6
Zm00001eb297790 Zea mays HOM05D001772 ORTHO05D023027 5.0e-30 136.7 135 52.6
Glyma.19G255000 Glycine max HOM05D001772 ORTHO05D008903 4.6e-15 87.0 59 62.7
Nitab4.5_0015177g0020 Nicotiana tabacum HOM05D001772 ORTHO05D008903 9.5e-13 79.3 50 62.0
Zm00001eb098470 Zea mays HOM05D001772 ORTHO05D008903 1.4e-08 65.5 52 57.7


User provided reference genes

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