Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_005310 Daucus carota HOM05D004273 ORTHO05D005041 3.9e-279 964.1 485 100.0
Dinv01561 Davidia involucrata HOM05D004273 ORTHO05D005041 2.5e-156 556.2 483 58.2
Dinv32873 Davidia involucrata HOM05D004273 ORTHO05D005041 3.7e-152 542.3 453 58.9
Lj1A156G61 Lonicera japonica HOM05D004273 ORTHO05D005041 4.5e-150 535.4 480 57.1
Hma1.2p1_0624F.1_g191440 Hydrangea macrophylla HOM05D004273 ORTHO05D005041 1.3e-149 533.9 483 55.9
CSS0043051 Camellia sinensis var. sinensis HOM05D004273 ORTHO05D005041 1.4e-143 513.8 481 53.6
Cfa011474 Carpinus fangiana HOM05D004273 ORTHO05D005041 2.2e-141 506.5 484 53.7
Actinidia07045 Actinidia chinensis HOM05D004273 ORTHO05D005041 1.5e-137 493.8 471 53.7
PGSC0003DMG400030404 Solanum tuberosum HOM05D004273 ORTHO05D005041 2.0e-137 493.4 484 53.3
CSS0029075 Camellia sinensis var. sinensis HOM05D004273 ORTHO05D005041 1.3e-136 490.7 482 52.7
Cpa.g.sc190.7 Carica papaya HOM05D004273 ORTHO05D005041 1.7e-136 490.3 487 53.8
TAR633G2082 Trochodendron aralioides HOM05D004273 ORTHO05D005041 2.2e-136 490.0 481 52.4
Sopen06g032400 Solanum pennellii HOM05D004273 ORTHO05D005041 4.8e-136 488.8 484 53.5
Lj3g0025927 Lotus japonicus HOM05D004273 ORTHO05D005041 6.3e-136 488.4 457 54.5
CiPaw.13G097100 Carya illinoinensis HOM05D004273 ORTHO05D005041 1.8e-135 486.9 485 53.0
Potri.001G237400 Populus trichocarpa HOM05D004273 ORTHO05D005041 1.8e-135 486.9 453 55.2
Peaxi162Scf00679g00214 Petunia axillaris HOM05D004273 ORTHO05D005041 2.4e-135 486.5 487 53.0
COL.COLO4_18478 Corchorus olitorius HOM05D004273 ORTHO05D005041 3.1e-135 486.1 454 53.5
Solyc06g075980.3 Solanum lycopersicum HOM05D004273 ORTHO05D005041 6.9e-135 485.0 484 53.5
Manes.04G033100 Manihot esculenta HOM05D004273 ORTHO05D005041 2.9e-133 479.6 433 54.7
CAN.G394.46 Capsicum annuum HOM05D004273 ORTHO05D005041 6.5e-133 478.4 488 51.2
Ca_19181_v3 Cicer arietinum L. HOM05D004273 ORTHO05D005041 1.4e-132 477.2 456 53.3
Lalb_Chr03g0026761 Lupinus albus HOM05D004273 ORTHO05D005041 1.4e-132 477.2 453 52.3
Prupe.6G080900 Prunus persica HOM05D004273 ORTHO05D005041 1.9e-132 476.9 436 54.8
Medtr4g063605 Medicago truncatula HOM05D004273 ORTHO05D005041 3.2e-132 476.1 481 51.4
Gohir.A03G040200 Gossypium hirsutum HOM05D004273 ORTHO05D005041 7.2e-132 474.9 459 53.2
Sabra16G0143100 Salix brachista HOM05D004273 ORTHO05D005041 7.2e-132 474.9 453 54.1
TAR636G0691 Trochodendron aralioides HOM05D004273 ORTHO05D005041 7.2e-132 474.9 474 52.1
Atru.chr3.3842_Atru.chr3.3843 Acer truncatum HOM05D004273 ORTHO05D005041 2.1e-131 473.4 488 52.3
HanXRQChr02g0044491 Helianthus annuus HOM05D004273 ORTHO05D005041 2.1e-131 473.4 484 51.2
TPR.G10209 Trifolium pratense HOM05D004273 ORTHO05D005041 2.7e-131 473.0 480 51.0
Potri.009G028700 Populus trichocarpa HOM05D004273 ORTHO05D005041 8.0e-131 471.5 428 55.6
Lalb_Chr19g0137751 Lupinus albus HOM05D004273 ORTHO05D005041 1.4e-130 470.7 454 52.2
Gorai.003G134500 Gossypium raimondii HOM05D004273 ORTHO05D005041 2.3e-130 469.9 459 52.7
Sabra09G0019900 Salix brachista HOM05D004273 ORTHO05D005041 3.9e-130 469.2 456 52.9
Sed0008303 Sechium edule HOM05D004273 ORTHO05D005041 5.2e-130 468.8 447 52.1
Thecc.09G325000 Theobroma cacao HOM05D004273 ORTHO05D005041 2.0e-129 466.8 455 52.3
Glyma.11G141100 Glycine max HOM05D004273 ORTHO05D005041 3.3e-129 466.1 485 50.9
QL01p032775 Quercus lobata HOM05D004273 ORTHO05D005041 7.4e-129 464.9 481 50.1
ClCG02G020320 Citrullus lanatus HOM05D004273 ORTHO05D005041 9.7e-129 464.5 447 51.5
Gohir.D03G127800 Gossypium hirsutum HOM05D004273 ORTHO05D005041 1.7e-128 463.8 459 52.1
MBI05_g06541_MAGBIO Magnolia biondii HOM05D004273 ORTHO05D005041 2.2e-128 463.4 481 50.1
GSVIVG01025001001 Vitis vinifera HOM05D004273 ORTHO05D005041 4.8e-128 462.2 415 57.3
Rhsim13G0085100 Rhododendron simsii HOM05D004273 ORTHO05D005041 6.3e-128 461.8 482 49.4
Haze_24060 Corylus avellana HOM05D004273 ORTHO05D005041 1.4e-127 460.7 502 49.8
MSTRG.1791 Avicennia marina HOM05D004273 ORTHO05D005041 5.3e-127 458.8 468 51.9
ECA236G0424 Erigeron canadensis HOM05D004273 ORTHO05D005041 1.2e-126 457.6 485 49.7
TWI79G1222 Tripterygium wilfordii HOM05D004273 ORTHO05D005041 1.2e-126 457.6 486 49.0
Lsat_1_v5_gn_8_77981 Lactuca sativa HOM05D000739 ORTHO05D005041 1.6e-126 457.2 473 49.7
Phvul.011G065600 Phaseolus vulgaris HOM05D004273 ORTHO05D005041 1.0e-125 454.5 481 51.1
THA.LOC104799449 Tarenaya hassleriana HOM05D004273 ORTHO05D005041 2.2e-125 453.4 492 47.2
TWI31G0117 Tripterygium wilfordii HOM05D004273 ORTHO05D005041 3.8e-125 452.6 486 48.6
Migut.E01325 Erythranthe guttata HOM05D004273 ORTHO05D005041 8.5e-125 451.4 452 53.5
Psat7g217720 Pisum sativum HOM05D004273 ORTHO05D005041 1.9e-124 450.3 488 49.6
Oeu017093.1 Olea europaea HOM05D004273 ORTHO05D005041 4.2e-124 449.1 484 49.6
PGR102G1220 Punica granatum HOM05D004273 ORTHO05D005041 4.2e-124 449.1 483 50.1
VMungo1127G1030 Vigna mungo HOM05D004273 ORTHO05D005041 5.5e-124 448.7 481 49.7
MD11G1142800 Malus domestica HOM05D004273 ORTHO05D005041 4.7e-123 445.7 450 51.8
FvH4_3g35600 Fragaria vesca HOM05D004273 ORTHO05D005041 6.1e-123 445.3 451 49.4
AL5G25280 Arabidopsis lyrata HOM05D004273 ORTHO05D005041 4.0e-122 442.6 487 47.8
CsaV3_6G017020 Cucumis sativus L. HOM05D004273 ORTHO05D005041 6.7e-122 441.8 448 50.0
RcHm_v2.0_Chr5g0063781 Rosa chinensis HOM05D004273 ORTHO05D005041 2.0e-121 440.3 454 50.4
SGA_v2.0_scaffold111G31385 Striga asiatica HOM05D004273 ORTHO05D005041 2.0e-121 440.3 469 49.3
Aqoxy4G02965 Aquilegia oxysepala HOM05D004273 ORTHO05D005041 7.5e-121 438.3 481 48.0
arahy.Tifrunner.gnm1.ann1.N7EFUM Arachis hypogaea HOM05D004273 ORTHO05D005041 1.7e-120 437.2 472 47.9
FAN11G1845 Fragaria x ananassa HOM05D004273 ORTHO05D005041 1.7e-120 437.2 457 49.2
FAN21G1625 Fragaria x ananassa HOM05D004273 ORTHO05D005041 2.2e-120 436.8 448 49.3
MD03G1096600 Malus domestica HOM05D004273 ORTHO05D005041 3.7e-120 436.0 457 50.8
arahy.Tifrunner.gnm1.ann1.T00HES Arachis hypogaea HOM05D004273 ORTHO05D005041 4.8e-120 435.6 477 47.6
AT3G46450 Arabidopsis thaliana HOM05D004273 ORTHO05D005041 8.2e-120 434.9 489 47.0
Glyma.15G039800 Glycine max HOM05D004273 ORTHO05D005041 8.2e-120 434.9 480 48.3
arahy.Tifrunner.gnm1.ann1.44D9RB Arachis hypogaea HOM05D004273 ORTHO05D005041 1.4e-119 434.1 478 47.1
arahy.Tifrunner.gnm1.ann1.0ME452 Arachis hypogaea HOM05D004273 ORTHO05D005041 1.8e-119 433.7 478 47.3
PSO384G1393 Papaver somniferum HOM05D004273 ORTHO05D005041 2.4e-119 433.3 473 48.6
PSO339G3737 Papaver somniferum HOM05D004273 ORTHO05D005041 3.1e-119 433.0 484 47.7
BolC3t19006H Brassica oleracea HOM05D004273 ORTHO05D005041 1.6e-118 430.6 433 51.3
BcaC01g02262 Brassica carinata HOM05D004273 ORTHO05D005041 2.0e-118 430.3 433 51.3
Phvul.L004243 Phaseolus vulgaris HOM05D004273 ORTHO05D005041 2.7e-118 429.9 451 49.2
A06p27020 Brassica napus HOM05D004273 ORTHO05D005041 3.5e-118 429.5 432 51.4
FAN16G0116 Fragaria x ananassa HOM05D004273 ORTHO05D005041 3.5e-118 429.5 480 47.9
Dinv31442 Davidia involucrata HOM05D004273 ORTHO05D005041 4.5e-118 429.1 471 48.0
Carub.0005s1225 Capsella rubella HOM05D004273 ORTHO05D005041 5.9e-118 428.7 487 47.4
Cc01_g12600 Coffea canephora HOM05D004273 ORTHO05D005041 1.3e-117 427.6 485 48.7
Duzib170G0539 Durio zibethinus HOM05D004273 ORTHO05D005041 1.3e-117 427.6 416 52.9
Eucgr.B02383 Eucalyptus grandis HOM05D004273 ORTHO05D005041 1.3e-117 427.6 484 47.1
Thhalv10002507m.g Eutrema salsugineum HOM05D004273 ORTHO05D005041 1.3e-117 427.6 479 47.2
Aa31LG4G15500 Aethionema arabicum HOM05D004273 ORTHO05D005041 1.7e-117 427.2 490 46.3
C03p67250 Brassica napus HOM05D004273 ORTHO05D005041 1.7e-117 427.2 433 51.0
Hund04983 Selenicereus undatus HOM05D004273 ORTHO05D005041 3.8e-117 426.0 473 48.4
BraA06t25640Z Brassica rapa HOM05D004273 ORTHO05D005041 1.5e-116 424.1 433 51.0
CARHR155380 Cardamine hirsuta HOM05D004273 ORTHO05D005041 1.5e-116 424.1 495 45.5
VMungo1080G0602 Vigna mungo HOM05D004273 ORTHO05D005041 1.9e-116 423.7 454 48.5
MELO3C013689.2 Cucumis melo HOM05D004273 ORTHO05D005041 3.2e-116 422.9 461 47.5
BcaB02g10723 Brassica carinata HOM05D004273 ORTHO05D005041 4.2e-116 422.5 473 48.0
Sp5g15230 Schrenkiella parvula HOM05D004273 ORTHO05D005041 5.5e-116 422.2 465 47.7
SalBow8G5260 Salvia bowleyana HOM05D004273 ORTHO05D005041 1.6e-115 420.6 467 48.6
Lalb_Chr24g0394211 Lupinus albus HOM05D004273 ORTHO05D005041 2.1e-115 420.2 456 48.0
CDE04G0924 Ceratophyllum demersum HOM05D004273 ORTHO05D005041 3.0e-114 416.4 484 45.5
Hma1.2p1_0533F.1_g173530 Hydrangea macrophylla HOM05D004273 ORTHO05D005041 2.0e-113 413.7 454 47.4
Duzib168G0407 Durio zibethinus HOM05D004273 ORTHO05D005041 1.3e-112 411.0 465 49.5
Glyma.13G334700 Glycine max HOM05D004273 ORTHO05D005041 1.8e-111 407.1 480 46.2
EL10Ac7g15984 Beta vulgaris HOM05D004273 ORTHO05D005041 4.1e-111 406.0 424 49.5
CSS0019329 Camellia sinensis var. sinensis HOM05D004273 ORTHO05D005041 7.0e-111 405.2 448 46.4
ATR0559G270 Amborella trichopoda HOM05D004273 ORTHO05D005041 7.7e-110 401.7 462 47.0
Ciclev10028607m.g Citrus clementina HOM05D004273 ORTHO05D005041 8.6e-109 398.3 394 53.3
AUR62001817 Chenopodium quinoa HOM05D004273 ORTHO05D005041 2.5e-108 396.7 454 46.9
AUR62009603 Chenopodium quinoa HOM05D004273 ORTHO05D005041 4.7e-107 392.5 480 45.2
Nitab4.5_0001838g0010 Nicotiana tabacum HOM05D004273 ORTHO05D005041 1.8e-106 390.6 483 46.2
Os03g0820900 Oryza sativa ssp. japonica HOM05D004273 ORTHO05D005041 3.0e-106 389.8 459 44.2
Nn2g10411 Nelumbo nucifera HOM05D004273 ORTHO05D005041 6.8e-106 388.7 365 56.2
Actinidia02958 Actinidia chinensis HOM05D004273 ORTHO05D005041 2.0e-105 387.1 486 44.7
Zm00001eb062630 Zea mays HOM05D004273 ORTHO05D005041 3.4e-105 386.3 457 44.4
Sc06g0002640 Simmondsia chinensis HOM05D004273 ORTHO05D005041 1.7e-104 384.0 441 45.4
Lsat_1_v5_gn_2_116561 Lactuca sativa HOM05D004273 ORTHO05D005041 1.8e-103 380.6 382 49.7
Sopen05g033050 Solanum pennellii HOM05D004273 ORTHO05D005041 3.1e-103 379.8 497 41.0
EL10Ac2g03411 Beta vulgaris HOM05D004273 ORTHO05D005041 4.1e-103 379.4 379 49.1
Solyc05g054570.3 Solanum lycopersicum HOM05D004273 ORTHO05D005041 4.1e-103 379.4 497 41.2
CAN.G1013.9 Capsicum annuum HOM05D004273 ORTHO05D005041 7.0e-103 378.6 496 40.9
PGSC0003DMG400023525 Solanum tuberosum HOM05D004273 ORTHO05D005041 7.8e-102 375.2 491 40.7
Peaxi162Scf00015g00152 Petunia axillaris HOM05D004273 ORTHO05D005041 2.9e-101 373.2 501 40.1
AUR62038361 Chenopodium quinoa HOM05D004273 ORTHO05D005041 3.8e-101 372.9 409 47.2
Ah.16g107130 Amaranthus hybridus HOM05D004273 ORTHO05D005041 3.6e-99 366.3 443 44.5
Nitab4.5_0001831g0040 Nicotiana tabacum HOM05D004273 ORTHO05D005041 3.6e-99 366.3 499 40.3
Cc02_g08070 Coffea canephora HOM05D004273 ORTHO05D005041 1.8e-98 364.0 438 44.3
Nitab4.5_0014877g0010 Nicotiana tabacum HOM05D004273 ORTHO05D005041 1.5e-97 360.9 499 40.1
SEGI_06894 Sequoiadendron giganteum HOM05D004273 ORTHO05D005041 7.5e-97 358.6 456 41.4
Nitab4.5_0001304g0060 Nicotiana tabacum HOM05D004273 ORTHO05D005041 1.3e-96 357.8 302 57.6
HanXRQChr14g0458231 Helianthus annuus HOM05D004273 ORTHO05D005041 6.4e-96 355.5 400 44.0
ECA238G2787 Erigeron canadensis HOM05D004273 ORTHO05D005041 8.3e-96 355.1 467 40.5
HanXRQChr07g0201161 Helianthus annuus HOM05D004273 ORTHO05D005041 4.6e-94 349.4 384 46.9
Sc06g0008260 Simmondsia chinensis HOM05D004273 ORTHO05D005041 1.3e-93 347.8 337 51.3
HPP92_019085 Vanilla planifolia HOM05D004273 ORTHO05D005041 1.2e-91 341.3 461 39.7
unitig_747.g21363 Utricularia gibba HOM05D004273 ORTHO05D005041 1.5e-89 334.3 431 42.2
AUR62040968 Chenopodium quinoa HOM05D004273 ORTHO05D005041 3.5e-86 323.2 369 46.6
Zm00001eb211720 Zea mays HOM05D004273 ORTHO05D005041 5.4e-79 299.3 374 43.9
AagrBONN_evm.TU.Sc2ySwM_117.239 Anthoceros agrestis HOM05D004273 ORTHO05D005041 5.1e-77 292.7 369 42.5
SMO266G0022 Selaginella moellendorffii HOM05D004273 ORTHO05D005041 8.6e-77 292.0 431 38.1
Lj1A935G50 Lonicera japonica HOM05D004273 ORTHO05D005041 4.4e-73 279.6 512 34.0
vmacro03093 Vaccinium macrocarpon HOM05D004273 ORTHO05D005041 2.2e-72 277.3 294 49.7
Hund12542 Selenicereus undatus HOM05D004273 ORTHO05D005041 1.9e-68 264.2 291 46.7
Pp3c9_11070 Physcomitrium patens HOM05D004273 ORTHO05D005041 5.6e-68 262.7 462 36.6
Pp3c14_19130 Physcomitrium patens HOM05D004273 ORTHO05D005041 6.9e-66 255.8 516 31.0
Mapoly0153s0026 Marchantia polymorpha HOM05D004273 ORTHO05D005041 9.0e-66 255.4 297 44.1
Ah.08g219160 Amaranthus hybridus HOM05D004273 ORTHO05D005041 2.7e-62 243.8 237 50.6
Lsat_1_v5_gn_2_116541 Lactuca sativa HOM05D004109 ORTHO05D005867 4.9e-48 196.4 210 46.7
Actinidia07731 Actinidia chinensis HOM05D004273 ORTHO05D005041 1.4e-42 178.3 151 57.0
CBR_g4074 Chara braunii HOM05D004273 ORTHO05D005041 7.1e-39 166.0 365 29.9
DCAR_027649 Daucus carota HOM05D004273 ORTHO05D005041 6.9e-34 149.4 528 26.1
Ah.08g219150 Amaranthus hybridus HOM05D004273 ORTHO05D005041 4.5e-33 146.7 191 42.4
Actinidia07724 Actinidia chinensis HOM05D004273 ORTHO05D005041 6.5e-32 142.9 162 45.7
FAN11G3764 Fragaria x ananassa HOM05D004273 ORTHO05D005041 5.7e-28 129.8 353 28.3
Lj8C85T7 Lonicera japonica HOM05D004273 ORTHO05D005041 8.2e-27 125.9 145 47.6
FvH4_3g35570 Fragaria vesca HOM05D004273 ORTHO05D005041 1.1e-23 115.5 277 30.0
unitig_748.g7756 Utricularia gibba HOM05D004273 ORTHO05D005041 3.0e-21 107.5 87 58.6
vmacro03094 Vaccinium macrocarpon HOM05D004273 ORTHO05D005041 3.1e-18 97.4 72 63.9
TPR.G17285 Trifolium pratense HOM05D004273 ORTHO05D005041 1.3e-16 92.0 148 37.8
Mapoly0091s0075 Marchantia polymorpha HOM05D004273 ORTHO05D031172 1.6e-14 85.1 170 31.8
AagrBONN_evm.TU.Sc2ySwM_117.2361 Anthoceros agrestis HOM05D004273 ORTHO05D031172 2.8e-11 74.3 188 26.6
HPP92_003105 Vanilla planifolia HOM05D000394 ORTHO05D000299 1.7e-08 65.1 152 28.9
Zm00001eb292580 Zea mays HOM05D004273 ORTHO05D005041 4.2e-07 60.5 41 70.7
MCO07G371 Micromonas commoda HOM05D004273 ORTHO05D005041 5.5e-07 60.1 205 22.9
HPP92_019826 Vanilla planifolia HOM05D000050 ORTHO05D005041 3.6e-06 57.4 47 55.3
Actinidia34339 Actinidia chinensis HOM05D004273 ORTHO05D005041 4.7e-06 57.0 72 44.4


User provided reference genes

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