Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_005295 Daucus carota HOM05D005647 ORTHO05D006968 0.0e+00 1250.0 669 100.0
Actinidia00810 Actinidia chinensis HOM05D005647 ORTHO05D006968 1.2e-132 478.0 713 44.6
Lj1A178T39 Lonicera japonica HOM05D005647 ORTHO05D006968 3.4e-132 476.5 639 48.0
Nitab4.5_0008854g0020 Nicotiana tabacum HOM05D005647 ORTHO05D006968 1.0e-128 464.9 348 69.3
Nitab4.5_0000022g0330 Nicotiana tabacum HOM05D005647 ORTHO05D006968 1.3e-128 464.5 460 57.4
Rhsim01G0223800 Rhododendron simsii HOM05D005647 ORTHO05D006968 5.6e-127 459.1 589 47.7
Lsat_1_v5_gn_5_167021 Lactuca sativa HOM05D005647 ORTHO05D006968 9.6e-127 458.4 343 70.0
CiPaw.13G102300 Carya illinoinensis HOM05D005647 ORTHO05D006968 4.8e-126 456.1 662 43.7
GSVIVG01025064001 Vitis vinifera HOM05D005647 ORTHO05D006968 6.2e-126 455.7 627 45.9
Solyc06g005200.3 Solanum lycopersicum HOM05D005647 ORTHO05D006968 1.1e-125 454.9 341 68.9
Sopen06g001190 Solanum pennellii HOM05D005647 ORTHO05D006968 1.1e-125 454.9 341 68.9
PGSC0003DMG400033668 Solanum tuberosum HOM05D005647 ORTHO05D006968 1.3e-123 448.0 470 55.1
ECA248G2619 Erigeron canadensis HOM05D005647 ORTHO05D006968 3.8e-123 446.4 332 69.6
QL03p069904 Quercus lobata HOM05D005647 ORTHO05D006968 1.1e-122 444.9 546 48.7
Cc01_g12040 Coffea canephora HOM05D005647 ORTHO05D006968 1.6e-121 441.0 366 62.6
TAR623G0344 Trochodendron aralioides HOM05D005647 ORTHO05D006968 6.0e-121 439.1 367 64.0
Cfa011418 Carpinus fangiana HOM05D005647 ORTHO05D006968 1.3e-120 438.0 350 64.9
Thecc.09G331200 Theobroma cacao HOM05D005647 ORTHO05D006968 2.3e-120 437.2 566 47.2
SGA_v2.0_scaffold61G21232 Striga asiatica HOM05D005647 ORTHO05D006968 2.5e-119 433.7 410 56.3
Duzib150G0770 Durio zibethinus HOM05D005647 ORTHO05D006968 4.3e-119 433.0 675 43.3
Gohir.A05G099200 Gossypium hirsutum HOM05D005647 ORTHO05D006968 4.3e-119 433.0 456 54.6
MSTRG.21166 Avicennia marina HOM05D005647 ORTHO05D006968 5.6e-119 432.6 374 61.2
Actinidia03769 Actinidia chinensis HOM05D005647 ORTHO05D006968 4.8e-118 429.5 570 47.5
Gorai.009G103000 Gossypium raimondii HOM05D005647 ORTHO05D006968 1.4e-117 427.9 453 53.6
COL.COLO4_18417 Corchorus olitorius HOM05D005647 ORTHO05D006968 2.4e-117 427.2 672 43.6
HanXRQChr14g0429211 Helianthus annuus HOM05D005647 ORTHO05D006968 9.0e-117 425.2 342 65.2
Ciclev10027867m.g Citrus clementina HOM05D005647 ORTHO05D006968 1.5e-116 424.5 341 62.5
Gohir.D05G099100 Gossypium hirsutum HOM05D005647 ORTHO05D006968 2.0e-116 424.1 659 43.2
RcHm_v2.0_Chr4g0385531 Rosa chinensis HOM05D005647 ORTHO05D006968 2.6e-116 423.7 338 64.5
FAN11G0841 Fragaria x ananassa HOM05D005647 ORTHO05D006968 5.8e-116 422.5 335 65.4
RcHm_v2.0_Chr5g0062191 Rosa chinensis HOM05D005647 ORTHO05D006968 2.2e-115 420.6 338 63.6
FAN25G1201 Fragaria x ananassa HOM05D005647 ORTHO05D006968 3.8e-115 419.9 335 65.1
FAN21G3075 Fragaria x ananassa HOM05D005647 ORTHO05D006968 4.9e-115 419.5 335 64.5
FvH4_3g34550 Fragaria vesca HOM05D005647 ORTHO05D006968 1.4e-114 417.9 457 52.5
FAN16G2614 Fragaria x ananassa HOM05D005647 ORTHO05D006968 3.2e-114 416.8 335 63.9
Potri.009G025800 Populus trichocarpa HOM05D005647 ORTHO05D006968 3.2e-114 416.8 631 41.7
Peaxi162Scf00006g01310 Petunia axillaris HOM05D005647 ORTHO05D006968 5.5e-114 416.0 337 65.0
MD11G1117900 Malus domestica HOM05D005647 ORTHO05D006968 7.1e-114 415.6 339 62.8
CAN.G200.2 Capsicum annuum HOM05D005647 ORTHO05D006968 9.3e-114 415.2 305 68.5
Atru.chr3.3782 Acer truncatum HOM05D005647 ORTHO05D006968 1.2e-113 414.8 712 39.9
TWI75G1819 Tripterygium wilfordii HOM05D005647 ORTHO05D006968 3.5e-113 413.3 697 38.7
CANSAT54G2414 Cannabis sativa HOM05D005647 ORTHO05D006968 7.9e-113 412.1 337 62.9
PSO541G4932 Papaver somniferum HOM05D005647 ORTHO05D006968 7.9e-113 412.1 432 54.9
Manes.04G028600 Manihot esculenta HOM05D005647 ORTHO05D006968 1.8e-112 411.0 693 39.8
Migut.D02155 Erythranthe guttata HOM05D005647 ORTHO05D006968 3.0e-112 410.2 382 58.4
Glyma.13G196800 Glycine max HOM05D005647 ORTHO05D006968 3.0e-112 410.2 374 58.8
Aa31LG1G12110 Aethionema arabicum HOM05D005647 ORTHO05D006968 1.5e-111 407.9 351 61.5
AUR62001855 Chenopodium quinoa HOM05D005647 ORTHO05D006968 2.5e-111 407.1 437 54.0
AL8G36550 Arabidopsis lyrata HOM05D005647 ORTHO05D006968 3.3e-111 406.8 352 59.4
PSO447G0260 Papaver somniferum HOM05D005647 ORTHO05D006968 4.3e-111 406.4 355 60.3
Hund18946 Selenicereus undatus HOM05D005647 ORTHO05D006968 9.7e-111 405.2 342 64.0
Haze_23998 Corylus avellana HOM05D005647 ORTHO05D006968 1.3e-110 404.8 350 62.0
AT5G59980 Arabidopsis thaliana HOM05D005647 ORTHO05D006968 1.1e-109 401.7 366 57.4
ClCG02G020580 Citrullus lanatus HOM05D005647 ORTHO05D006968 1.1e-109 401.7 446 48.9
EL10Ac7g15937 Beta vulgaris HOM05D005647 ORTHO05D006968 1.4e-109 401.4 424 54.5
MBI14_g34527_MAGBIO Magnolia biondii HOM05D005647 ORTHO05D006968 2.4e-109 400.6 341 63.3
Ah.15g096320 Amaranthus hybridus HOM05D005647 ORTHO05D006968 5.3e-109 399.4 414 53.9
Carub.0004s0912 Capsella rubella HOM05D005647 ORTHO05D006968 6.9e-109 399.1 353 58.1
VMungo1080G1709 Vigna mungo HOM05D005647 ORTHO05D006968 1.2e-108 398.3 375 57.9
TPR.G17867 Trifolium pratense HOM05D005647 ORTHO05D006968 3.4e-108 396.7 342 59.4
Ca_01361_v3 Cicer arietinum L. HOM05D005647 ORTHO05D006968 5.9e-108 396.0 341 60.1
Medtr2g096090 Medicago truncatula HOM05D005647 ORTHO05D006968 1.0e-107 395.2 337 59.6
Phvul.L002619 Phaseolus vulgaris HOM05D005647 ORTHO05D006968 1.0e-107 395.2 410 53.9
TPR.G11621 Trifolium pratense HOM05D005647 ORTHO05D006968 1.0e-107 395.2 339 59.9
PSO675G6613 Papaver somniferum HOM05D005647 ORTHO05D006968 1.3e-107 394.8 330 63.6
Lj3g0017565 Lotus japonicus HOM05D005647 ORTHO05D006968 1.7e-107 394.4 455 50.8
THA.LOC104809599 Tarenaya hassleriana HOM05D005647 ORTHO05D006968 1.7e-107 394.4 441 49.4
MELO3C025708.2 Cucumis melo HOM05D005647 ORTHO05D006968 3.8e-107 393.3 369 54.7
PGR119G0370 Punica granatum HOM05D005647 ORTHO05D006968 6.5e-107 392.5 331 61.0
Psat5g282040 Pisum sativum HOM05D005647 ORTHO05D006968 3.2e-106 390.2 391 54.0
Lalb_Chr24g0394311 Lupinus albus HOM05D005647 ORTHO05D006968 4.2e-106 389.8 342 57.9
vmacro14498 Vaccinium macrocarpon HOM05D005647 ORTHO05D006968 4.2e-106 389.8 609 42.4
Sed0021109 Sechium edule HOM05D005647 ORTHO05D006968 5.5e-106 389.4 703 37.3
Oeu058515.3 Olea europaea HOM05D005647 ORTHO05D006968 7.2e-106 389.0 478 48.5
Sc14g0000850 Simmondsia chinensis HOM05D005647 ORTHO05D006968 9.3e-106 388.7 441 51.5
Aqoxy4G03106 Aquilegia oxysepala HOM05D005647 ORTHO05D006968 2.3e-104 384.0 353 58.1
SalBow3G2669 Salvia bowleyana HOM05D005647 ORTHO05D006968 8.8e-104 382.1 443 50.6
SalBow3G1239 Salvia bowleyana HOM05D005647 ORTHO05D006968 1.1e-103 381.7 443 50.6
Thhalv10012856m.g Eutrema salsugineum HOM05D005647 ORTHO05D006968 2.5e-103 380.6 456 49.1
A02p06680 Brassica napus HOM05D005647 ORTHO05D006968 7.4e-103 379.0 350 57.1
C02p11970 Brassica napus HOM05D005647 ORTHO05D006968 1.7e-102 377.9 350 57.1
BraA02t05750Z Brassica rapa HOM05D005647 ORTHO05D006968 1.7e-102 377.9 350 57.1
BcaB05g22600 Brassica carinata HOM05D005647 ORTHO05D006968 8.2e-102 375.6 355 56.6
Cpa.g.sc139.4 Carica papaya HOM05D005647 ORTHO05D006968 1.1e-101 375.2 333 59.5
BolC2t07297H Brassica oleracea HOM05D005647 ORTHO05D006968 1.2e-100 371.7 383 53.3
Aqoxy4G03104_Aqoxy4G03103 Aquilegia oxysepala HOM05D005647 ORTHO05D006968 2.9e-99 367.1 345 58.3
Sabra09G0017200 Salix brachista HOM05D005647 ORTHO05D000187 1.1e-98 365.2 622 39.2
Aa31LG5G21920 Aethionema arabicum HOM05D005647 ORTHO05D006968 2.5e-98 364.0 312 62.2
Sp6g21650 Schrenkiella parvula HOM05D005647 ORTHO05D006968 3.2e-98 363.6 477 47.0
THA.LOC104813123 Tarenaya hassleriana HOM05D005647 ORTHO05D006968 9.4e-98 362.1 340 55.9
Prupe.6G088000 Prunus persica HOM05D005647 ORTHO05D006968 1.6e-97 361.3 517 42.9
BcaC04g19653 Brassica carinata HOM05D005647 ORTHO05D006968 2.1e-97 360.9 359 55.4
BolC9t58115H Brassica oleracea HOM05D005647 ORTHO05D006968 2.1e-97 360.9 359 55.4
unitig_736.g22430 Utricularia gibba HOM05D005647 ORTHO05D006968 3.6e-97 360.1 343 54.2
ATR0787G117 Amborella trichopoda HOM05D005647 ORTHO05D006968 4.7e-97 359.8 308 59.4
C09p52480 Brassica napus HOM05D005647 ORTHO05D006968 6.1e-97 359.4 359 54.9
Eucgr.A02758 Eucalyptus grandis HOM05D005647 ORTHO05D006968 1.8e-96 357.8 334 55.7
BcaB08g36205 Brassica carinata HOM05D005647 ORTHO05D006968 2.3e-96 357.5 359 54.9
BraA10t43800Z Brassica rapa HOM05D005647 ORTHO05D006968 3.9e-96 356.7 459 46.2
A10p17190 Brassica napus HOM05D005647 ORTHO05D006968 5.7e-95 352.8 459 46.4
CDE08G0081 Ceratophyllum demersum HOM05D005647 ORTHO05D006968 1.4e-93 348.2 373 53.4
CDE02G4018 Ceratophyllum demersum HOM05D005647 ORTHO05D006968 2.5e-90 337.4 369 50.9
arahy.Tifrunner.gnm1.ann1.7X2355 Arachis hypogaea HOM05D005647 ORTHO05D006968 2.7e-89 334.0 462 42.9
arahy.Tifrunner.gnm1.ann1.W04KXW Arachis hypogaea HOM05D005647 ORTHO05D006968 2.3e-88 330.9 469 42.4
arahy.Tifrunner.gnm1.ann1.S4SLQI Arachis hypogaea HOM05D005647 ORTHO05D006968 2.8e-86 323.9 384 45.1
arahy.Tifrunner.gnm1.ann1.ZDAZ4C Arachis hypogaea HOM05D005647 ORTHO05D006968 2.1e-81 307.8 384 44.0
Nn2g13828 Nelumbo nucifera HOM05D005647 ORTHO05D006968 6.1e-73 279.6 206 69.4
Gorai.013G129300 Gossypium raimondii HOM05D005647 ORTHO05D006968 9.1e-69 265.8 239 59.8
AUR62009649 Chenopodium quinoa HOM05D005647 ORTHO05D006968 1.7e-67 261.5 237 57.4
VMungo1127G1784 Vigna mungo HOM05D005647 ORTHO05D006968 1.8e-64 251.5 203 64.0
Pp3c23_18130 Physcomitrium patens HOM05D005647 ORTHO05D006968 3.4e-63 247.3 393 40.5
Mapoly0041s0094 Marchantia polymorpha HOM05D005647 ORTHO05D006968 5.0e-59 233.4 389 36.0
Os12g0175900 Oryza sativa ssp. japonica HOM05D005647 ORTHO05D006968 1.9e-58 231.5 299 44.1
SEGI_32841 Sequoiadendron giganteum HOM05D005647 ORTHO05D006968 5.2e-56 223.4 225 51.6
Zm00001eb163100 Zea mays HOM05D005647 ORTHO05D006968 2.4e-53 214.5 321 41.4
CsaV3_6G022020 Cucumis sativus L. HOM05D005647 ORTHO05D006968 1.3e-46 192.2 234 45.7
VMungo1127G0608 Vigna mungo HOM05D005647 ORTHO05D006968 1.9e-37 161.8 177 49.7
Dinv32824 Davidia involucrata HOM05D005647 ORTHO05D006968 4.1e-37 160.6 491 30.1
Aqoxy4G01384 Aquilegia oxysepala HOM05D005647 ORTHO05D006968 1.5e-34 152.1 114 69.3
Lsat_1_v5_gn_5_100621 Lactuca sativa HOM05D005647 ORTHO05D006968 4.7e-33 147.1 148 54.1
MBI03_g45445_MAGBIO Magnolia biondii HOM05D005647 ORTHO05D006968 5.8e-31 140.2 123 60.2
CARHR273620 Cardamine hirsuta HOM05D005647 ORTHO05D006968 7.8e-28 129.8 190 41.6
VMungo1127G1495 Vigna mungo HOM05D005647 ORTHO05D006968 1.9e-26 125.2 123 57.7
SMO348G0064 Selaginella moellendorffii HOM05D005647 ORTHO05D006968 1.4e-24 119.0 130 48.5
EL10Ac9g22529 Beta vulgaris HOM05D005647 ORTHO05D006968 3.1e-24 117.9 86 65.1
Cre02.g088050 Chlamydomonas reinhardtii HOM05D005647 ORTHO05D006968 6.4e-22 110.2 162 34.6
SEGI_06158 Sequoiadendron giganteum HOM05D005647 ORTHO05D006968 1.6e-17 95.5 106 50.9
MCO02G042 Micromonas commoda HOM05D005647 ORTHO05D006968 6.2e-17 93.6 264 28.4
QL03p025644 Quercus lobata HOM05D005647 ORTHO05D006968 6.9e-16 90.1 62 67.7
MBI10_g46876_MAGBIO Magnolia biondii HOM05D005647 ORTHO05D006968 2.6e-15 88.2 83 55.4
MBI14_g07932_MAGBIO Magnolia biondii HOM05D002922 ORTHO05D006968 2.7e-12 78.2 55 70.9
Gohir.D11G155700 Gossypium hirsutum HOM05D001229 ORTHO05D011852 3.9e-11 74.3 54 66.7
Gorai.007G165900 Gossypium raimondii HOM05D001229 ORTHO05D011852 3.9e-11 74.3 54 66.7
SMO153G0012 Selaginella moellendorffii HOM05D004307 ORTHO05D005068 8.4e-06 56.6 118 31.4


User provided reference genes

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