Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_005251 Daucus carota HOM05D006221 ORTHO05D007759 0.0e+00 1186.0 589 100.0
Dinv30939 Davidia involucrata HOM05D006221 ORTHO05D007759 7.5e-208 727.6 633 62.2
Hma1.2p1_0052F.1_g030430 Hydrangea macrophylla HOM05D006221 ORTHO05D007759 3.1e-206 722.2 641 62.6
Lju99A6T47 Lonicera japonica HOM05D006221 ORTHO05D007759 5.9e-205 718.0 623 62.9
GSVIVG01031316001 Vitis vinifera HOM05D006221 ORTHO05D007759 1.8e-201 706.4 627 60.9
Actinidia11678 Actinidia chinensis HOM05D006221 ORTHO05D007759 2.2e-199 699.5 641 59.9
vmacro01605 Vaccinium macrocarpon HOM05D006221 ORTHO05D007759 4.4e-192 675.2 677 55.8
Solyc01g101110.3 Solanum lycopersicum HOM05D006221 ORTHO05D007759 4.9e-191 671.8 621 57.8
QL03p010449 Quercus lobata HOM05D006221 ORTHO05D007759 2.0e-189 666.4 632 57.8
Sopen01g044560 Solanum pennellii HOM05D006221 ORTHO05D007759 2.7e-189 666.0 621 57.6
Migut.B00875 Erythranthe guttata HOM05D006221 ORTHO05D007759 1.1e-185 654.1 634 57.4
Haze_03998 Corylus avellana HOM05D006221 ORTHO05D007759 3.1e-185 652.5 688 55.1
Manes.09G180400 Manihot esculenta HOM05D006221 ORTHO05D007759 4.0e-185 652.1 636 56.9
MSTRG.16421 Avicennia marina HOM05D006221 ORTHO05D007759 2.6e-184 649.4 626 56.5
Rhsim11G0101500 Rhododendron simsii HOM05D006221 ORTHO05D007759 7.5e-184 647.9 741 50.1
Oeu016545.1 Olea europaea HOM05D006221 ORTHO05D007759 2.9e-183 646.0 620 56.9
Atru.chr12.1555 Acer truncatum HOM05D006221 ORTHO05D007759 1.4e-182 643.7 635 55.7
Cc02_g35760 Coffea canephora HOM05D006221 ORTHO05D007759 3.5e-181 639.0 653 55.3
TWI38G0202 Tripterygium wilfordii HOM05D006221 ORTHO05D007759 1.5e-179 633.6 635 55.3
CiPaw.07G035200 Carya illinoinensis HOM05D006221 ORTHO05D007759 9.5e-179 630.9 560 60.0
SGA_v2.0_scaffold671G53422 Striga asiatica HOM05D006221 ORTHO05D007759 1.1e-177 627.5 673 53.0
Ciclev10011303m.g Citrus clementina HOM05D006221 ORTHO05D007759 4.0e-177 625.5 634 54.7
Nn3g21902 Nelumbo nucifera HOM05D006221 ORTHO05D007759 3.4e-176 622.5 627 54.7
Eucgr.B01816 Eucalyptus grandis HOM05D006221 ORTHO05D007759 2.2e-175 619.8 630 55.9
Sabra05G0000700 Salix brachista HOM05D006221 ORTHO05D007759 3.2e-174 615.9 641 55.1
Potri.005G003400 Populus trichocarpa HOM05D006221 ORTHO05D007759 9.2e-174 614.4 640 54.7
Sabra05G0014800 Salix brachista HOM05D006221 ORTHO05D007759 1.2e-173 614.0 641 54.9
PGR083G2161 Punica granatum HOM05D006221 ORTHO05D007759 2.1e-173 613.2 635 53.7
Ca_09279_v3 Cicer arietinum L. HOM05D006221 ORTHO05D007759 1.0e-172 610.9 627 53.1
Thecc.05G328800 Theobroma cacao HOM05D006221 ORTHO05D007759 5.1e-172 608.6 620 55.8
CANSAT54G2840 Cannabis sativa HOM05D006221 ORTHO05D007759 6.6e-172 608.2 642 53.4
Lj1g0008157 Lotus japonicus HOM05D006221 ORTHO05D007759 1.5e-171 607.1 632 55.1
arahy.Tifrunner.gnm1.ann1.CKL802 Arachis hypogaea HOM05D006221 ORTHO05D007759 2.5e-171 606.3 628 53.0
SalBow5G5479 Salvia bowleyana HOM05D006221 ORTHO05D007759 2.5e-171 606.3 667 51.7
Duzib177G0418 Durio zibethinus HOM05D006221 ORTHO05D007759 2.1e-170 603.2 620 54.4
Gohir.D13G116600 Gossypium hirsutum HOM05D006221 ORTHO05D007759 4.7e-170 602.1 632 53.3
Gohir.A13G113400 Gossypium hirsutum HOM05D006221 ORTHO05D007759 6.2e-170 601.7 626 53.4
CsaV3_1G038010 Cucumis sativus L. HOM05D006221 ORTHO05D007759 1.1e-169 600.9 628 53.8
Psat3g014840 Pisum sativum HOM05D006221 ORTHO05D007759 1.4e-169 600.5 565 57.2
Gorai.013G131100 Gossypium raimondii HOM05D006221 ORTHO05D007759 2.4e-169 599.7 636 53.1
Lalb_Chr18g0046191 Lupinus albus HOM05D006221 ORTHO05D007759 3.1e-169 599.4 623 53.5
ClCG03G017850 Citrullus lanatus HOM05D006221 ORTHO05D007759 5.2e-169 598.6 629 54.1
Sed0012716 Sechium edule HOM05D006221 ORTHO05D007759 5.2e-169 598.6 634 53.9
TPR.G1625 Trifolium pratense HOM05D006221 ORTHO05D007759 5.2e-169 598.6 626 54.0
Medtr7g111610 Medicago truncatula HOM05D006221 ORTHO05D007759 6.8e-169 598.2 645 52.4
ECA236G2609 Erigeron canadensis HOM05D006221 ORTHO05D007759 2.0e-168 596.7 619 54.4
Glyma.19G226000 Glycine max HOM05D006221 ORTHO05D007759 9.9e-168 594.3 625 53.8
HanXRQChr14g0449401 Helianthus annuus HOM05D006221 ORTHO05D007759 1.7e-167 593.6 629 53.6
Sc16g0009350 Simmondsia chinensis HOM05D006221 ORTHO05D007759 4.9e-167 592.0 633 52.3
Phvul.001G222600 Phaseolus vulgaris HOM05D006221 ORTHO05D007759 2.4e-166 589.7 620 53.5
VMungo1383G1939 Vigna mungo HOM05D006221 ORTHO05D007759 1.6e-165 587.0 631 52.9
THA.LOC104816844 Tarenaya hassleriana HOM05D006221 ORTHO05D007759 3.5e-165 585.9 633 53.1
Aqoxy2G02530 Aquilegia oxysepala HOM05D006221 ORTHO05D007759 6.6e-164 581.6 568 55.8
AUR62006807 Chenopodium quinoa HOM05D006221 ORTHO05D007759 1.2e-162 577.4 633 51.2
Peaxi162Scf00357g00116 Petunia axillaris HOM05D006221 ORTHO05D007759 4.7e-162 575.5 629 52.1
arahy.Tifrunner.gnm1.ann1.7121P0 Arachis hypogaea HOM05D006221 ORTHO05D007759 6.2e-162 575.1 628 51.6
Nitab4.5_0014566g0010 Nicotiana tabacum HOM05D006221 ORTHO05D007759 1.4e-161 573.9 614 52.4
RcHm_v2.0_Chr3g0458361 Rosa chinensis HOM05D006221 ORTHO05D007759 1.8e-161 573.5 604 53.6
Lsat_1_v5_gn_9_77141 Lactuca sativa HOM05D006221 ORTHO05D007759 6.9e-161 571.6 618 52.4
PSO761G0564 Papaver somniferum HOM05D006221 ORTHO05D007759 1.2e-160 570.9 631 52.3
PSO210G0944 Papaver somniferum HOM05D006221 ORTHO05D007759 1.5e-160 570.5 633 51.8
Thhalv10007117m.g Eutrema salsugineum HOM05D006221 ORTHO05D007759 1.3e-159 567.4 629 52.1
AUR62000466 Chenopodium quinoa HOM05D006221 ORTHO05D007759 2.2e-159 566.6 633 50.9
CAN.G1248.26 Capsicum annuum HOM05D006221 ORTHO05D007759 6.4e-159 565.1 650 50.5
MBI19_g32730_MAGBIO Magnolia biondii HOM05D006221 ORTHO05D007759 8.4e-159 564.7 645 50.5
Aa31LG1G5650 Aethionema arabicum HOM05D006221 ORTHO05D007759 7.1e-158 561.6 652 50.9
PGSC0003DMG400018290 Solanum tuberosum HOM05D006221 ORTHO05D007759 1.2e-157 560.8 611 51.7
Prupe.6G305800 Prunus persica HOM05D006221 ORTHO05D007759 1.0e-156 557.8 618 52.1
AT1G09450 Arabidopsis thaliana HOM05D006221 ORTHO05D007759 1.7e-156 557.0 630 51.3
FvH4_6g08390 Fragaria vesca HOM05D006221 ORTHO05D007759 1.7e-156 557.0 606 53.5
CARHR009420 Cardamine hirsuta HOM05D006221 ORTHO05D007759 2.3e-156 556.6 628 51.1
FAN05G2605 Fragaria x ananassa HOM05D006221 ORTHO05D007759 1.1e-155 554.3 597 53.1
Hund07275 Selenicereus undatus HOM05D006221 ORTHO05D007759 5.6e-155 552.0 630 50.8
Hund07280 Selenicereus undatus HOM05D006221 ORTHO05D007759 7.3e-155 551.6 545 55.8
Carub.0001s0880 Capsella rubella HOM05D006221 ORTHO05D007759 1.4e-153 547.4 627 50.6
Sp1g08060 Schrenkiella parvula HOM05D006221 ORTHO05D007759 4.0e-153 545.8 636 51.3
Hma1.2p1_0052F.1_g030440 Hydrangea macrophylla HOM05D006221 ORTHO05D007759 5.3e-153 545.4 573 55.3
Nitab4.5_0001931g0080 Nicotiana tabacum HOM05D006221 ORTHO05D007759 9.0e-153 544.7 542 54.6
AL1G19970 Arabidopsis lyrata HOM05D006221 ORTHO05D007759 1.5e-152 543.9 625 50.6
FAN02G1566 Fragaria x ananassa HOM05D006221 ORTHO05D007759 2.0e-152 543.5 592 53.0
BraA08t35366Z Brassica rapa HOM05D006221 ORTHO05D007759 2.6e-152 543.1 628 50.3
C08p12920 Brassica napus HOM05D006221 ORTHO05D007759 1.3e-151 540.8 632 49.7
BcaB03g13298 Brassica carinata HOM05D006221 ORTHO05D007759 3.8e-151 539.3 635 49.3
A08p34550 Brassica napus HOM05D006221 ORTHO05D007759 4.9e-151 538.9 635 49.4
EL10Ac4g09547 Beta vulgaris HOM05D006221 ORTHO05D007759 1.1e-150 537.7 627 49.9
MD04G1187300 Malus domestica HOM05D006221 ORTHO05D007759 1.9e-150 537.0 562 53.4
BolC8t48922H Brassica oleracea HOM05D006221 ORTHO05D007759 6.0e-149 531.9 644 48.8
BcaC07g38511 Brassica carinata HOM05D006221 ORTHO05D007759 2.4e-145 520.0 614 49.5
Dinv30938 Davidia involucrata HOM05D006221 ORTHO05D007759 2.4e-142 510.0 377 69.0
PSO017G3773 Papaver somniferum HOM05D006221 ORTHO05D007759 1.6e-130 470.7 538 50.4
unitig_699.g19069 Utricularia gibba HOM05D006221 ORTHO05D007759 1.5e-128 464.2 562 50.9
HPP92_001185 Vanilla planifolia HOM05D006221 ORTHO05D007759 1.7e-127 460.7 599 45.9
Zm00001eb109970 Zea mays HOM05D006221 ORTHO05D007759 5.9e-120 435.6 642 44.5
Potri.013G003600 Populus trichocarpa HOM05D006221 ORTHO05D007759 1.9e-118 430.6 379 60.4
ATR0796G167 Amborella trichopoda HOM05D006221 ORTHO05D007759 9.4e-118 428.3 644 42.4
Ah.10g026960 Amaranthus hybridus HOM05D006221 ORTHO05D007759 4.2e-110 402.9 405 56.0
TAR633G1110 Trochodendron aralioides HOM05D003727 ORTHO05D004731 2.1e-109 400.6 469 51.0
SHI18018 Sapria himalayana HOM05D006221 ORTHO05D007759 3.7e-106 389.8 514 45.9
SEGI_23402 Sequoiadendron giganteum HOM05D006221 ORTHO05D007759 9.7e-99 365.2 705 36.6
AagrBONN_evm.TU.Sc2ySwM_228.2896 Anthoceros agrestis HOM05D006221 ORTHO05D007759 7.0e-89 332.4 335 49.3
MELO3C015244.2 Cucumis melo HOM05D006221 ORTHO05D007759 7.7e-88 328.9 370 51.1
Pp3c5_21110 Physcomitrium patens HOM05D006221 ORTHO05D007759 1.8e-84 317.8 337 47.2
FAN09G0827 Fragaria x ananassa HOM05D006221 ORTHO05D007759 2.6e-83 313.9 464 44.4
CDE08G0155 Ceratophyllum demersum HOM05D006221 ORTHO05D007759 4.9e-82 309.7 595 35.6
Mapoly0101s0065 Marchantia polymorpha HOM05D006221 ORTHO05D007759 4.9e-82 309.7 338 47.6
COL.COLO4_05510 Corchorus olitorius HOM05D006221 ORTHO05D007759 6.8e-76 289.3 591 36.5
Cpa.g.sc48.218 Carica papaya HOM05D006221 ORTHO05D007759 2.4e-73 280.8 509 38.9
CBR_g46893 Chara braunii HOM05D006221 ORTHO05D007759 1.2e-72 278.5 376 41.5
SMO169G0298 Selaginella moellendorffii HOM05D006221 ORTHO05D007759 2.5e-62 244.2 226 52.2
Glyma.03G228700 Glycine max HOM05D006221 ORTHO05D007759 3.0e-55 220.7 146 72.6
Cre02.g108000 Chlamydomonas reinhardtii HOM05D006221 ORTHO05D007759 1.1e-46 192.2 289 39.4
Lj9A230T20 Lonicera japonica HOM05D006221 ORTHO05D007759 9.6e-46 189.1 213 50.2
MCO05G201 Micromonas commoda HOM05D006221 ORTHO05D007759 3.5e-40 170.6 168 54.2
Actinidia16908 Actinidia chinensis HOM05D006221 ORTHO05D007759 7.3e-38 162.9 180 52.2
PRCOL_00002024 Prasinoderma coloniale HOM05D006221 ORTHO05D007759 6.2e-29 133.3 192 38.5
Nn5g27477 Nelumbo nucifera HOM05D001388 ORTHO05D001234 4.0e-28 130.6 120 55.0
C09p35620 Brassica napus HOM05D006221 ORTHO05D007759 5.5e-17 93.6 63 65.1
BolC9t56398H Brassica oleracea HOM05D006221 ORTHO05D007759 5.5e-17 93.6 63 65.1
FvH4_1g12820 Fragaria vesca HOM05D006221 ORTHO05D007759 3.7e-13 80.9 100 48.0
PRCOL_00002025 Prasinoderma coloniale HOM05D006221 ORTHO05D007759 1.2e-08 65.9 203 29.6
Actinidia26529 Actinidia chinensis HOM05D006221 ORTHO05D007759 2.7e-08 64.7 36 72.2
Cfa023263 Carpinus fangiana HOM05D006221 ORTHO05D007759 2.7e-08 64.7 238 24.4
PSO170G3396 Papaver somniferum HOM05D000502 ORTHO05D000356 3.3e-06 57.8 105 39.0
vmacro07607 Vaccinium macrocarpon HOM05D006221 ORTHO05D007759 4.3e-06 57.4 42 66.7


User provided reference genes

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