Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_005192 Daucus carota HOM05D012721 ORTHO05D035037 1.6e-89 333.6 301 100.0
DCAR_005198 Daucus carota HOM05D000005 ORTHO05D000294 1.2e-31 141.4 288 59.4
DCAR_005216 Daucus carota HOM05D000005 ORTHO05D000012 1.9e-18 97.4 126 45.2
DCAR_005190 Daucus carota HOM05D000005 ORTHO05D000012 2.4e-16 90.5 279 48.4
DCAR_001225 Daucus carota HOM05D000005 ORTHO05D000012 5.8e-15 85.9 98 54.1
DCAR_029356 Daucus carota HOM05D000005 ORTHO05D000012 6.2e-09 65.9 64 54.7
Dinv12508 Davidia involucrata HOM05D000005 ORTHO05D000012 6.9e-08 62.4 50 64.0
Ciclev10000206m.g Citrus clementina HOM05D000005 ORTHO05D000012 1.2e-07 61.6 48 60.4
VMungo0331G0874 Vigna mungo HOM05D000005 ORTHO05D011732 1.2e-07 61.6 61 50.8
Sabra13G0083200 Salix brachista HOM05D000005 ORTHO05D000012 2.0e-07 60.8 45 64.4
Atru.chr5.3402 Acer truncatum HOM05D000005 ORTHO05D000012 2.6e-07 60.5 47 63.8
Nn8g41080 Nelumbo nucifera HOM05D000005 ORTHO05D000012 4.5e-07 59.7 50 64.0
Nitab4.5_0004313g0020 Nicotiana tabacum HOM05D009617 ORTHO05D010313 4.5e-07 59.7 64 53.1
QL07p005124 Quercus lobata HOM05D000005 ORTHO05D000012 4.5e-07 59.7 45 62.2
VMungo0331G1183 Vigna mungo HOM05D000005 ORTHO05D011732 5.8e-07 59.3 61 49.2
Phvul.010G026000 Phaseolus vulgaris HOM05D000005 ORTHO05D000012 7.6e-07 58.9 61 52.5
VMungo0331G1236 Vigna mungo HOM05D000005 ORTHO05D011732 7.6e-07 58.9 51 56.9
Lj8A316G23 Lonicera japonica HOM05D009617 ORTHO05D010313 1.0e-06 58.5 82 37.8
Lj8C312T5 Lonicera japonica HOM05D009617 ORTHO05D010313 1.0e-06 58.5 82 37.8
VMungo0331G1394 Vigna mungo HOM05D000005 ORTHO05D011732 1.0e-06 58.5 61 49.2
HanXRQChr08g0209741 Helianthus annuus HOM05D000005 ORTHO05D000012 1.3e-06 58.2 44 63.6
MD02G1052200 Malus domestica HOM05D000005 ORTHO05D000012 1.3e-06 58.2 268 29.5
Phvul.010G027100 Phaseolus vulgaris HOM05D000005 ORTHO05D000012 1.3e-06 58.2 61 54.1
VMungo0331G0079 Vigna mungo HOM05D000005 ORTHO05D011732 1.3e-06 58.2 61 52.5
VMungo0331G1711 Vigna mungo HOM05D000005 ORTHO05D011732 1.3e-06 58.2 61 50.8
COL.COLO4_17384 Corchorus olitorius HOM05D000005 ORTHO05D000012 1.7e-06 57.8 60 45.0
FAN04G0386 Fragaria x ananassa HOM05D000005 ORTHO05D000012 1.7e-06 57.8 46 58.7
Nn8g41114 Nelumbo nucifera HOM05D000005 ORTHO05D000012 1.7e-06 57.8 61 47.5
QL93p0092_0079 Quercus lobata HOM05D000005 ORTHO05D000012 1.7e-06 57.8 50 50.0
VMungo0331G0854 Vigna mungo HOM05D000005 ORTHO05D011732 1.7e-06 57.8 61 47.5
VMungo0331G0892 Vigna mungo HOM05D000005 ORTHO05D011732 1.7e-06 57.8 61 47.5
VMungo0331G1492 Vigna mungo HOM05D000005 ORTHO05D011732 1.7e-06 57.8 51 54.9
QL04p075018 Quercus lobata HOM05D000005 ORTHO05D000012 2.2e-06 57.4 45 57.8
VMungo0331G0046 Vigna mungo HOM05D000005 ORTHO05D011732 2.2e-06 57.4 51 54.9
Glyma.16G085900 Glycine max HOM05D000005 ORTHO05D000012 2.9e-06 57.0 61 50.8
Phvul.010G023500 Phaseolus vulgaris HOM05D000005 ORTHO05D000012 2.9e-06 57.0 49 61.2
Phvul.010G025300 Phaseolus vulgaris HOM05D000005 ORTHO05D008900 2.9e-06 57.0 61 52.5
Potri.013G097000 Populus trichocarpa HOM05D000005 ORTHO05D000012 2.9e-06 57.0 49 55.1
Potri.013G098000 Populus trichocarpa HOM05D000005 ORTHO05D000012 2.9e-06 57.0 49 55.1
CiPaw.07G129000 Carya illinoinensis HOM05D000005 ORTHO05D000012 3.8e-06 56.6 46 58.7
Lj8A315G24 Lonicera japonica HOM05D009617 ORTHO05D010313 3.8e-06 56.6 83 36.1
Lj3g0002296 Lotus japonicus HOM05D000005 ORTHO05D000012 3.8e-06 56.6 51 54.9
Potri.013G097300 Populus trichocarpa HOM05D000005 ORTHO05D000012 3.8e-06 56.6 44 61.4
Potri.013G097832 Populus trichocarpa HOM05D000005 ORTHO05D000012 3.8e-06 56.6 45 60.0
QL09p002721 Quercus lobata HOM05D000005 ORTHO05D000012 3.8e-06 56.6 46 60.9
PGSC0003DMG400022699 Solanum tuberosum HOM05D000005 ORTHO05D000012 3.8e-06 56.6 51 54.9
DCAR_004408 Daucus carota HOM05D012721 ORTHO05D020544 4.9e-06 56.2 53 54.7
Phvul.010G024000 Phaseolus vulgaris HOM05D000005 ORTHO05D000012 4.9e-06 56.2 51 58.8
Phvul.010G028000 Phaseolus vulgaris HOM05D000005 ORTHO05D000012 4.9e-06 56.2 51 62.7
VMungo0331G0043 Vigna mungo HOM05D000005 ORTHO05D011732 4.9e-06 56.2 51 58.8
VMungo0331G1432 Vigna mungo HOM05D000005 ORTHO05D011732 4.9e-06 56.2 51 58.8
Manes.13G002671 Manihot esculenta HOM05D000005 ORTHO05D000012 6.5e-06 55.8 47 59.6
QL03p000629 Quercus lobata HOM05D000005 ORTHO05D013544 6.5e-06 55.8 45 60.0
PGSC0003DMG400033334 Solanum tuberosum HOM05D000005 ORTHO05D000012 6.5e-06 55.8 55 49.1
CiPaw.16G015100 Carya illinoinensis HOM05D000005 ORTHO05D000012 8.4e-06 55.5 47 57.4
Ciclev10003731m.g Citrus clementina HOM05D000005 ORTHO05D000012 8.4e-06 55.5 48 58.3
Eucgr.J01308 Eucalyptus grandis HOM05D000005 ORTHO05D000012 8.4e-06 55.5 47 61.7
HanXRQChr08g0209601 Helianthus annuus HOM05D000005 ORTHO05D000012 8.4e-06 55.5 44 61.4
Oeu001180.1 Olea europaea HOM05D000005 ORTHO05D000012 8.4e-06 55.5 46 58.7
Oeu016197.1 Olea europaea HOM05D000005 ORTHO05D021686 8.4e-06 55.5 46 58.7
Peaxi162Scf00194g01053 Petunia axillaris HOM05D000005 ORTHO05D035037 8.4e-06 55.5 48 60.4
Phvul.010G024200 Phaseolus vulgaris HOM05D000005 ORTHO05D000012 8.4e-06 55.5 51 58.8
Phvul.010G026700 Phaseolus vulgaris HOM05D000005 ORTHO05D000012 8.4e-06 55.5 61 50.8
Phvul.010G027300 Phaseolus vulgaris HOM05D000005 ORTHO05D000012 8.4e-06 55.5 61 54.1
Potri.017G103701 Populus trichocarpa HOM05D000005 ORTHO05D000012 8.4e-06 55.5 45 60.0
QL04p027472 Quercus lobata HOM05D000005 ORTHO05D010574 8.4e-06 55.5 54 51.9
VMungo0331G1719 Vigna mungo HOM05D000005 ORTHO05D011732 8.4e-06 55.5 61 47.5


User provided reference genes

Program Settings