Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_005138 Daucus carota HOM05D000034 ORTHO05D002688 1.1e-128 463.4 241 100.0
DCAR_015793 Daucus carota HOM05D005504 ORTHO05D002688 1.1e-35 154.5 93 84.9
Hma1.2p1_1109F.1_g257970 Hydrangea macrophylla HOM05D005504 ORTHO05D002688 4.5e-34 149.1 306 38.2
Lsat_1_v5_gn_9_108520 Lactuca sativa HOM05D056539 ORTHO05D002688 7.7e-34 148.3 238 38.7
ECA233G3708 Erigeron canadensis HOM05D004228 ORTHO05D005137 1.7e-33 147.1 237 40.1
ECA233G4621 Erigeron canadensis HOM05D000911 ORTHO05D000890 1.7e-33 147.1 242 39.3
ECA232G3538 Erigeron canadensis HOM05D005504 ORTHO05D002688 1.9e-32 143.7 212 41.5
Hma1.2p1_0076F.1_g039500 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 4.8e-28 129.0 301 34.2
Atru.chr5.1596 Acer truncatum HOM05D005504 ORTHO05D002688 1.1e-27 127.9 214 40.2
HanXRQChr12g0355561 Helianthus annuus HOM05D005504 ORTHO05D002688 1.2e-26 124.4 214 37.9
Atru.chr4.843 Acer truncatum HOM05D000034 ORTHO05D002688 1.5e-26 124.0 214 38.8
ECA238G0287 Erigeron canadensis HOM05D005504 ORTHO05D002688 1.7e-25 120.6 216 38.0
vmacro05860 Vaccinium macrocarpon HOM05D000034 ORTHO05D002688 2.1e-23 113.6 275 32.7
Lsat_1_v5_gn_9_18201 Lactuca sativa HOM05D056539 ORTHO05D002688 1.0e-22 111.3 206 35.9
CSS0036183 Camellia sinensis var. sinensis HOM05D005504 ORTHO05D002688 3.9e-22 109.4 213 34.3
EL10Ac6g13234 Beta vulgaris HOM05D000034 ORTHO05D002688 1.1e-21 107.8 217 35.0
Potri.005G252500 Populus trichocarpa HOM05D005504 ORTHO05D002688 1.1e-21 107.8 217 37.3
Hma1.2p1_0008F-2.1_g005830 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 9.7e-21 104.8 209 35.9
EL10Ac4g08776 Beta vulgaris HOM05D005504 ORTHO05D002688 4.8e-20 102.4 217 34.1
CSS0041263 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D002688 1.1e-19 101.3 278 30.6
Rhsim12G0045600 Rhododendron simsii HOM05D000034 ORTHO05D002688 1.1e-19 101.3 221 35.3
ECA232G2669 Erigeron canadensis HOM05D005504 ORTHO05D002688 1.4e-19 100.9 298 28.2
EL10Ac7g17364 Beta vulgaris HOM05D005504 ORTHO05D002688 1.6e-18 97.4 217 31.8
Duzib093G0882 Durio zibethinus HOM05D005504 ORTHO05D002688 2.0e-18 97.1 220 35.5
Lsat_1_v5_gn_7_17241 Lactuca sativa HOM05D005504 ORTHO05D002688 2.6e-18 96.7 218 32.1
Dinv00636 Davidia involucrata HOM05D021688 ORTHO05D022442 3.5e-18 96.3 203 36.9
CSS0003405 Camellia sinensis var. sinensis HOM05D005504 ORTHO05D002688 4.5e-18 95.9 214 31.8
Lsat_1_v5_gn_3_28480 Lactuca sativa HOM05D005504 ORTHO05D002688 4.5e-18 95.9 216 31.0
CSS0028977 Camellia sinensis var. sinensis HOM05D005504 ORTHO05D002688 5.9e-18 95.5 213 31.5
Hma1.2p1_0187F.1_g082350 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 5.9e-18 95.5 224 34.4
CSS0010294 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D002688 2.9e-17 93.2 278 30.2
Manes.05G124000 Manihot esculenta HOM05D005504 ORTHO05D002688 2.9e-17 93.2 221 34.8
QL02p014709 Quercus lobata HOM05D005504 ORTHO05D002688 2.9e-17 93.2 222 33.3
Ah.01g010920 Amaranthus hybridus HOM05D005504 ORTHO05D002688 6.5e-17 92.0 214 34.1
Ah.10g026380 Amaranthus hybridus HOM05D005504 ORTHO05D002688 1.9e-16 90.5 214 33.6
AUR62008529 Chenopodium quinoa HOM05D005504 ORTHO05D002688 1.6e-15 87.4 178 33.7
Rhsim08G0135500 Rhododendron simsii HOM05D000034 ORTHO05D000037 3.6e-15 86.3 177 33.9
ECA233G5926 Erigeron canadensis HOM05D012386 ORTHO05D002688 8.0e-15 85.1 172 34.3
Hma1.2p1_0301F.1_g118220 Hydrangea macrophylla HOM05D005504 ORTHO05D002688 1.4e-14 84.3 170 35.3
ECA238G4441 Erigeron canadensis HOM05D000034 ORTHO05D000562 1.8e-14 84.0 145 37.9
TPR.G21815 Trifolium pratense HOM05D003568 ORTHO05D004104 1.8e-14 84.0 209 31.1
arahy.Tifrunner.gnm1.ann1.GG48NL Arachis hypogaea HOM05D000034 ORTHO05D000037 3.0e-14 83.2 255 27.5
arahy.Tifrunner.gnm1.ann1.WRA5CI Arachis hypogaea HOM05D000034 ORTHO05D002688 4.0e-14 82.8 255 27.5
Lsat_1_v5_gn_5_85721 Lactuca sativa HOM05D000039 ORTHO05D000870 2.0e-13 80.5 120 40.0
QL02p021656 Quercus lobata HOM05D000034 ORTHO05D000037 4.4e-13 79.3 228 29.4
arahy.Tifrunner.gnm1.ann1.A110NB Arachis hypogaea HOM05D000034 ORTHO05D002688 9.7e-13 78.2 255 27.1
arahy.Tifrunner.gnm1.ann1.V1HUJD Arachis hypogaea HOM05D000034 ORTHO05D002688 9.7e-13 78.2 271 26.2
arahy.Tifrunner.gnm1.ann1.0J418G Arachis hypogaea HOM05D000034 ORTHO05D002688 1.3e-12 77.8 257 27.2
Glyma.02G129632 Glycine max HOM05D000034 ORTHO05D002688 1.3e-12 77.8 244 28.3
Glyma.07G272050 Glycine max HOM05D000034 ORTHO05D002688 1.3e-12 77.8 244 28.3
Glyma.10G052850 Glycine max HOM05D000034 ORTHO05D002688 1.3e-12 77.8 244 28.3
Medtr5g025995 Medicago truncatula HOM05D005504 ORTHO05D002688 1.7e-12 77.4 278 28.4
QL09p005462 Quercus lobata HOM05D000034 ORTHO05D000037 1.7e-12 77.4 215 29.8
Haze_23085 Corylus avellana HOM05D012386 ORTHO05D002688 2.2e-12 77.0 135 38.5
ECA248G2768 Erigeron canadensis HOM05D005504 ORTHO05D002688 2.2e-12 77.0 205 32.2
Medtr4g036040 Medicago truncatula HOM05D000034 ORTHO05D002688 2.2e-12 77.0 258 29.5
Atru.chr13.1509 Acer truncatum HOM05D005504 ORTHO05D002688 2.8e-12 76.6 76 55.3
ECA233G0508 Erigeron canadensis HOM05D000034 ORTHO05D000037 4.8e-12 75.9 99 50.5
Glyma.15G163350 Glycine max HOM05D000034 ORTHO05D002688 4.8e-12 75.9 244 27.9
arahy.Tifrunner.gnm1.ann1.C19S8A Arachis hypogaea HOM05D000034 ORTHO05D000037 1.1e-11 74.7 240 27.1
Medtr8g062180 Medicago truncatula HOM05D014266 ORTHO05D018035 1.1e-11 74.7 210 28.6
arahy.Tifrunner.gnm1.ann1.R7WLJ8 Arachis hypogaea HOM05D000034 ORTHO05D002688 3.1e-11 73.2 271 25.1
Medtr2g076190 Medicago truncatula HOM05D005504 ORTHO05D002688 4.1e-11 72.8 223 28.7
Hma1.2p1_1121F.1_g259230 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 5.3e-11 72.4 257 28.0
CSS0018718 Camellia sinensis var. sinensis HOM05D005504 ORTHO05D002688 9.1e-11 71.6 110 41.8
Lj1g0008887 Lotus japonicus HOM05D000034 ORTHO05D002688 9.1e-11 71.6 236 27.1
Medtr7g047540 Medicago truncatula HOM05D000034 ORTHO05D002688 9.1e-11 71.6 197 33.0
Medtr7g451740 Medicago truncatula HOM05D000034 ORTHO05D002688 9.1e-11 71.6 197 33.0
arahy.Tifrunner.gnm1.ann1.W93U0I Arachis hypogaea HOM05D000034 ORTHO05D002688 1.6e-10 70.9 271 25.8
CSS0017383 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 2.7e-10 70.1 234 29.1
Lj1g0004986 Lotus japonicus HOM05D000034 ORTHO05D002688 2.7e-10 70.1 236 27.1
TPR.G3960 Trifolium pratense HOM05D005504 ORTHO05D002688 3.5e-10 69.7 225 30.7
Medtr7g110505 Medicago truncatula HOM05D005504 ORTHO05D002688 4.5e-10 69.3 227 29.5
Psat7g219160 Pisum sativum HOM05D014266 ORTHO05D018035 4.5e-10 69.3 214 28.0
COL.COLO4_28891 Corchorus olitorius HOM05D021688 ORTHO05D022442 5.9e-10 68.9 178 34.8
Hma1.2p1_0317F.1_g123430 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 5.9e-10 68.9 193 29.5
Lj1g0022373 Lotus japonicus HOM05D000034 ORTHO05D002688 5.9e-10 68.9 234 27.8
arahy.Tifrunner.gnm1.ann1.UA7YVD Arachis hypogaea HOM05D000034 ORTHO05D002688 1.7e-09 67.4 224 26.3
arahy.Tifrunner.gnm1.ann1.PAB5ST Arachis hypogaea HOM05D000034 ORTHO05D002688 6.5e-09 65.5 219 27.4
Atru.chr1.2748 Acer truncatum HOM05D005504 ORTHO05D002688 1.1e-08 64.7 229 27.1
Cfa015598 Carpinus fangiana HOM05D012386 ORTHO05D002688 1.9e-08 63.9 126 34.1
Hma1.2p1_0018F.1_g013500 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 1.9e-08 63.9 183 33.3
QL08p058251 Quercus lobata HOM05D012386 ORTHO05D010611 1.9e-08 63.9 107 35.5
Haze_00946 Corylus avellana HOM05D012386 ORTHO05D002688 3.2e-08 63.2 126 34.1
Hma1.2p1_0035F.1_g021930 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 3.2e-08 63.2 209 29.7
CANSAT78G0906 Cannabis sativa HOM05D012386 ORTHO05D002688 4.2e-08 62.8 116 34.5
AUR62040606 Chenopodium quinoa HOM05D000034 ORTHO05D000037 4.2e-08 62.8 235 28.9
Hma1.2p1_0131F.1_g060610 Hydrangea macrophylla HOM05D000034 ORTHO05D010947 5.5e-08 62.4 208 28.8
CAN.G79.92 Capsicum annuum HOM05D008574 ORTHO05D010611 7.2e-08 62.0 224 29.9
ECA233G2828 Erigeron canadensis HOM05D000034 ORTHO05D000037 7.2e-08 62.0 91 41.8
Peaxi162Scf00002g00292 Petunia axillaris HOM05D008574 ORTHO05D010611 7.2e-08 62.0 90 43.3
CSS0010215 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 1.6e-07 60.8 237 27.4
Hma1.2p1_0269F.1_g107750 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 1.6e-07 60.8 151 33.8
Hma1.2p1_3244F.1_g334330 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 1.6e-07 60.8 151 33.8
Lj1g0018328 Lotus japonicus HOM05D000034 ORTHO05D002688 1.6e-07 60.8 234 26.5
Peaxi162Scf00008g00018 Petunia axillaris HOM05D008574 ORTHO05D010611 2.7e-07 60.1 129 36.4
QL06p003849 Quercus lobata HOM05D012386 ORTHO05D002688 2.7e-07 60.1 107 33.6
AUR62042045 Chenopodium quinoa HOM05D012386 ORTHO05D002688 3.6e-07 59.7 122 34.4
arahy.Tifrunner.gnm1.ann1.97STDM Arachis hypogaea HOM05D000034 ORTHO05D002688 4.7e-07 59.3 253 25.3
Manes.03G183002 Manihot esculenta HOM05D012386 ORTHO05D002688 4.7e-07 59.3 120 32.5
arahy.Tifrunner.gnm1.ann1.TXJ7KC Arachis hypogaea HOM05D000034 ORTHO05D002688 6.1e-07 58.9 230 25.2
arahy.Tifrunner.gnm1.ann1.ZA5JKI Arachis hypogaea HOM05D000034 ORTHO05D002688 6.1e-07 58.9 253 25.3
Ah.05g174390 Amaranthus hybridus HOM05D005504 ORTHO05D002688 1.0e-06 58.2 188 31.4
EL10Ac5g12237 Beta vulgaris HOM05D005504 ORTHO05D002688 2.3e-06 57.0 87 40.2
vmacro21865 Vaccinium macrocarpon HOM05D000665 ORTHO05D002688 3.0e-06 56.6 72 44.4
vmacro23405 Vaccinium macrocarpon HOM05D000665 ORTHO05D002688 3.0e-06 56.6 72 44.4
CSS0009964 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D010947 4.0e-06 56.2 221 25.3
AUR62000863 Chenopodium quinoa HOM05D000034 ORTHO05D000037 4.0e-06 56.2 176 29.5
Medtr3g027145 Medicago truncatula HOM05D005504 ORTHO05D002688 5.2e-06 55.8 221 27.6
Medtr5g086750 Medicago truncatula HOM05D005504 ORTHO05D002688 5.2e-06 55.8 221 27.6
Medtr7g094380 Medicago truncatula HOM05D005504 ORTHO05D002688 5.2e-06 55.8 221 27.6


User provided reference genes

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