Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_005070 Daucus carota HOM05D008184 ORTHO05D010791 7.4e-71 270.4 134 100.0
DCAR_009978 Daucus carota HOM05D008184 ORTHO05D010791 7.4e-63 243.8 133 88.7
DCAR_010132 Daucus carota HOM05D008184 ORTHO05D002997 7.4e-63 243.8 133 88.7
DCAR_010926 Daucus carota HOM05D008184 ORTHO05D010791 7.4e-63 243.8 133 88.7
DCAR_022582 Daucus carota HOM05D008184 ORTHO05D010791 7.4e-63 243.8 133 88.7
DCAR_030011 Daucus carota HOM05D008184 ORTHO05D002997 7.4e-63 243.8 133 88.7
DCAR_015843 Daucus carota HOM05D008184 ORTHO05D002997 2.8e-62 241.9 133 88.0
DCAR_031425 Daucus carota HOM05D008184 ORTHO05D002997 1.8e-56 222.6 123 87.0
DCAR_031896 Daucus carota HOM05D008184 ORTHO05D002997 1.0e-40 170.2 136 64.0
DCAR_025060 Daucus carota HOM05D008184 ORTHO05D002997 1.8e-40 169.5 136 64.0
DCAR_032236 Daucus carota HOM05D008184 ORTHO05D010791 3.0e-40 168.7 132 65.2
DCAR_005347 Daucus carota HOM05D008184 ORTHO05D002997 9.8e-39 163.7 85 92.9
DCAR_001163 Daucus carota HOM05D008184 ORTHO05D002997 1.7e-38 162.9 136 61.0
DCAR_029888 Daucus carota HOM05D006578 ORTHO05D008100 1.7e-38 162.9 136 61.0
DCAR_030557 Daucus carota HOM05D008184 ORTHO05D002997 2.2e-38 162.5 136 59.6
DCAR_026885 Daucus carota HOM05D008184 ORTHO05D002997 1.1e-37 160.2 136 59.6
DCAR_005964 Daucus carota HOM05D008184 ORTHO05D010791 4.1e-37 158.3 130 60.0
DCAR_022699 Daucus carota HOM05D008184 ORTHO05D002997 4.1e-37 158.3 130 60.0
DCAR_010992 Daucus carota HOM05D008184 ORTHO05D002997 2.9e-35 152.1 133 57.9
DCAR_010539 Daucus carota HOM05D008184 ORTHO05D002997 4.0e-32 141.7 141 50.4
DCAR_022227 Daucus carota HOM05D008184 ORTHO05D002997 4.0e-32 141.7 71 93.0
DCAR_001028 Daucus carota HOM05D008184 ORTHO05D002997 4.1e-29 131.7 136 47.1
DCAR_031319 Daucus carota HOM05D008184 ORTHO05D002997 4.1e-29 131.7 136 49.3
DCAR_010562 Daucus carota HOM05D008184 ORTHO05D002997 5.4e-29 131.3 110 59.1
DCAR_017847 Daucus carota HOM05D008184 ORTHO05D002997 2.0e-23 112.8 133 43.6
DCAR_030596 Daucus carota HOM05D008184 ORTHO05D002997 1.3e-22 110.2 127 44.1
DCAR_001080 Daucus carota HOM05D008184 ORTHO05D002997 5.4e-21 104.8 92 58.7
DCAR_030518 Daucus carota HOM05D008184 ORTHO05D002997 3.1e-16 89.0 84 48.8
DCAR_024341 Daucus carota HOM05D008184 ORTHO05D002997 1.2e-15 87.0 97 48.5
DCAR_028094 Daucus carota HOM05D008184 ORTHO05D010791 1.7e-14 83.2 138 37.0
DCAR_005230 Daucus carota HOM05D002069 ORTHO05D001421 6.4e-14 81.3 133 36.8
DCAR_024226 Daucus carota HOM05D002069 ORTHO05D001421 1.1e-13 80.5 133 36.1
DCAR_022671 Daucus carota HOM05D008184 ORTHO05D015632 1.4e-13 80.1 137 35.0
DCAR_015559 Daucus carota HOM05D002069 ORTHO05D001421 3.2e-13 79.0 134 35.1
DCAR_015986 Daucus carota HOM05D008184 ORTHO05D010791 5.4e-13 78.2 137 34.3
DCAR_030561 Daucus carota HOM05D008184 ORTHO05D002997 5.4e-13 78.2 137 34.3
DCAR_024745 Daucus carota HOM05D008184 ORTHO05D002997 2.1e-12 76.3 66 59.1
DCAR_005090 Daucus carota HOM05D002069 ORTHO05D002997 4.6e-12 75.1 134 36.6
DCAR_031481 Daucus carota HOM05D002069 ORTHO05D001421 4.6e-12 75.1 131 35.1
ECA247G0643 Erigeron canadensis HOM05D002069 ORTHO05D002997 4.6e-12 75.1 136 30.1
Lsat_1_v5_gn_5_95781 Lactuca sativa HOM05D000580 ORTHO05D001785 4.6e-12 75.1 134 32.1
ECA238G3097 Erigeron canadensis HOM05D002069 ORTHO05D001421 1.3e-11 73.6 132 29.5
DCAR_017289 Daucus carota HOM05D002069 ORTHO05D001421 2.3e-11 72.8 132 32.6
Lsat_1_v5_gn_1_92241 Lactuca sativa HOM05D002069 ORTHO05D001421 2.3e-11 72.8 133 33.1
Lsat_1_v5_gn_6_18960 Lactuca sativa HOM05D005502 ORTHO05D001421 2.3e-11 72.8 128 32.0
DCAR_022746 Daucus carota HOM05D008184 ORTHO05D010791 3.0e-11 72.4 128 36.7
Lsat_1_v5_gn_2_129320 Lactuca sativa HOM05D005502 ORTHO05D001421 3.9e-11 72.0 128 32.0
Lsat_1_v5_gn_5_176780 Lactuca sativa HOM05D005502 ORTHO05D001421 3.9e-11 72.0 128 32.0
Lsat_1_v5_gn_6_18980 Lactuca sativa HOM05D005502 ORTHO05D001421 5.1e-11 71.6 128 32.0
Lsat_1_v5_gn_9_19581 Lactuca sativa HOM05D005502 ORTHO05D001421 5.1e-11 71.6 128 32.0
DCAR_017370 Daucus carota HOM05D002069 ORTHO05D001421 6.6e-11 71.2 135 36.3
ECA238G0948 Erigeron canadensis HOM05D002069 ORTHO05D001421 6.6e-11 71.2 128 31.2
Lsat_1_v5_gn_8_19140 Lactuca sativa HOM05D005502 ORTHO05D001421 6.6e-11 71.2 133 32.3
DCAR_002013 Daucus carota HOM05D002069 ORTHO05D010791 8.6e-11 70.9 134 33.6
Lsat_1_v5_gn_5_165781 Lactuca sativa HOM05D005502 ORTHO05D001421 8.6e-11 70.9 129 31.8
Lsat_1_v5_gn_7_2960 Lactuca sativa HOM05D002069 ORTHO05D001421 8.6e-11 70.9 126 34.1
Lsat_1_v5_gn_2_50840 Lactuca sativa HOM05D005502 ORTHO05D001421 1.1e-10 70.5 129 31.0
Lsat_1_v5_gn_3_123280 Lactuca sativa HOM05D005502 ORTHO05D001421 1.1e-10 70.5 131 30.5
Lsat_1_v5_gn_2_129340 Lactuca sativa HOM05D005502 ORTHO05D001421 1.5e-10 70.1 129 31.8
ECA238G0549 Erigeron canadensis HOM05D002069 ORTHO05D001421 1.9e-10 69.7 130 27.7
Lsat_1_v5_gn_4_176160 Lactuca sativa HOM05D002069 ORTHO05D001421 1.9e-10 69.7 124 34.7
DCAR_030066 Daucus carota HOM05D002069 ORTHO05D010791 2.5e-10 69.3 127 32.3
DCAR_001470 Daucus carota HOM05D010768 ORTHO05D010791 3.3e-10 68.9 136 30.1
Lsat_1_v5_gn_3_5621 Lactuca sativa HOM05D002069 ORTHO05D001421 3.3e-10 68.9 134 30.6
DCAR_024115 Daucus carota HOM05D010768 ORTHO05D010791 4.3e-10 68.6 136 30.1
Lsat_1_v5_gn_2_65260 Lactuca sativa HOM05D002069 ORTHO05D001421 4.3e-10 68.6 126 33.3
Lsat_1_v5_gn_3_34060 Lactuca sativa HOM05D002069 ORTHO05D001421 4.3e-10 68.6 126 33.3
Lsat_1_v5_gn_5_100580 Lactuca sativa HOM05D002069 ORTHO05D001421 4.3e-10 68.6 126 33.3
Lsat_1_v5_gn_8_79561 Lactuca sativa HOM05D002069 ORTHO05D001421 4.3e-10 68.6 126 33.3
Lsat_1_v5_gn_9_109960 Lactuca sativa HOM05D002069 ORTHO05D001421 4.3e-10 68.6 126 33.3
Lsat_1_v5_gn_9_46640 Lactuca sativa HOM05D002069 ORTHO05D001421 4.3e-10 68.6 126 33.3
DCAR_010392 Daucus carota HOM05D002069 ORTHO05D010791 5.6e-10 68.2 127 31.5
Lsat_1_v5_gn_3_22140 Lactuca sativa HOM05D005502 ORTHO05D001421 5.6e-10 68.2 133 30.8
Hund08024 Selenicereus undatus HOM05D008769 ORTHO05D010955 7.3e-10 67.8 131 31.3
ECA233G5076 Erigeron canadensis HOM05D002069 ORTHO05D009717 9.6e-10 67.4 96 38.5
Lsat_1_v5_gn_5_151480 Lactuca sativa HOM05D002069 ORTHO05D001421 9.6e-10 67.4 132 31.8
ECA233G5305 Erigeron canadensis HOM05D002069 ORTHO05D001421 1.2e-09 67.0 128 32.8
DCAR_031891 Daucus carota HOM05D006463 ORTHO05D010791 2.1e-09 66.2 135 28.1
Lsat_1_v5_gn_4_41940 Lactuca sativa HOM05D002069 ORTHO05D001421 2.1e-09 66.2 126 32.5
DCAR_014911 Daucus carota HOM05D002069 ORTHO05D001421 2.8e-09 65.9 136 32.4
DCAR_029821 Daucus carota HOM05D002069 ORTHO05D001421 2.8e-09 65.9 136 32.4
ECA234G0167 Erigeron canadensis HOM05D002069 ORTHO05D001421 2.8e-09 65.9 96 38.5
DCAR_007478 Daucus carota HOM05D002069 ORTHO05D002997 3.6e-09 65.5 135 31.9
DCAR_010266 Daucus carota HOM05D008184 ORTHO05D010791 3.6e-09 65.5 135 31.1
DCAR_009128 Daucus carota HOM05D010768 ORTHO05D010791 4.7e-09 65.1 132 26.5
ECA246G2963 Erigeron canadensis HOM05D000001 ORTHO05D000003 6.2e-09 64.7 131 27.5
Lsat_1_v5_gn_8_12700 Lactuca sativa HOM05D005502 ORTHO05D001421 6.2e-09 64.7 133 30.1
DCAR_010394 Daucus carota HOM05D002069 ORTHO05D010791 8.1e-09 64.3 132 30.3
DCAR_024114 Daucus carota HOM05D002069 ORTHO05D001421 8.1e-09 64.3 136 30.1
HanXRQChr04g0112951 Helianthus annuus HOM05D002069 ORTHO05D001421 8.1e-09 64.3 135 31.9
HanXRQChr11g0351751 Helianthus annuus HOM05D002069 ORTHO05D001421 8.1e-09 64.3 135 31.9
DCAR_018463 Daucus carota HOM05D002069 ORTHO05D002997 1.1e-08 63.9 135 31.1
DCAR_022157 Daucus carota HOM05D002069 ORTHO05D010791 1.1e-08 63.9 132 31.1
Lsat_1_v5_gn_1_9880 Lactuca sativa HOM05D005502 ORTHO05D001421 1.4e-08 63.5 131 28.2
Lsat_1_v5_gn_3_8220 Lactuca sativa HOM05D005502 ORTHO05D001421 1.4e-08 63.5 131 29.0
Lsat_1_v5_gn_4_180461 Lactuca sativa HOM05D005502 ORTHO05D001421 1.4e-08 63.5 131 28.2
HanXRQChr04g0099091 Helianthus annuus HOM05D010964 ORTHO05D002997 1.8e-08 63.2 130 33.8
Lsat_1_v5_gn_0_7661 Lactuca sativa HOM05D005502 ORTHO05D001421 1.8e-08 63.2 131 28.2
Lsat_1_v5_gn_1_21581 Lactuca sativa HOM05D005502 ORTHO05D001421 1.8e-08 63.2 131 28.2
Lsat_1_v5_gn_5_106280 Lactuca sativa HOM05D005502 ORTHO05D001421 1.8e-08 63.2 131 28.2
Lsat_1_v5_gn_6_86360 Lactuca sativa HOM05D005502 ORTHO05D001421 1.8e-08 63.2 131 28.2
Lsat_1_v5_gn_8_34680 Lactuca sativa HOM05D005502 ORTHO05D001421 1.8e-08 63.2 131 28.2
Lsat_1_v5_gn_1_17840 Lactuca sativa HOM05D005502 ORTHO05D001421 2.4e-08 62.8 131 28.2
DCAR_010162 Daucus carota HOM05D002069 ORTHO05D001421 4.0e-08 62.0 137 31.4
ECA236G4108 Erigeron canadensis HOM05D002069 ORTHO05D001421 4.0e-08 62.0 132 28.8
Lsat_1_v5_gn_5_166541 Lactuca sativa HOM05D005502 ORTHO05D001421 4.0e-08 62.0 131 27.5
DCAR_005060 Daucus carota HOM05D017553 ORTHO05D010791 5.2e-08 61.6 96 31.2
HanXRQChr07g0192921 Helianthus annuus HOM05D006463 ORTHO05D002997 6.8e-08 61.2 134 28.4
DCAR_011744 Daucus carota HOM05D010768 ORTHO05D010791 8.9e-08 60.8 136 30.9
Lsat_1_v5_gn_8_17641 Lactuca sativa HOM05D015967 ORTHO05D029970 8.9e-08 60.8 120 30.8
Lsat_1_v5_gn_9_67060 Lactuca sativa HOM05D005502 ORTHO05D001421 1.2e-07 60.5 126 28.6
DCAR_022877 Daucus carota HOM05D008184 ORTHO05D002997 2.0e-07 59.7 54 53.7
HanXRQChr13g0412961 Helianthus annuus HOM05D002069 ORTHO05D001421 2.0e-07 59.7 132 27.3
HanXRQChr14g0449651 Helianthus annuus HOM05D002069 ORTHO05D001421 2.0e-07 59.7 132 27.3
ECA240G0723 Erigeron canadensis HOM05D000001 ORTHO05D019101 2.6e-07 59.3 131 26.7
Lsat_1_v5_gn_1_59601 Lactuca sativa HOM05D005502 ORTHO05D001421 4.4e-07 58.5 131 27.5
ECA232G1349 Erigeron canadensis HOM05D002069 ORTHO05D001421 5.8e-07 58.2 132 33.3
Hund08057 Selenicereus undatus HOM05D008410 ORTHO05D002997 7.6e-07 57.8 140 27.1
DCAR_001130 Daucus carota HOM05D047378 ORTHO05D010791 9.9e-07 57.4 91 34.1
Lsat_1_v5_gn_0_33721 Lactuca sativa HOM05D002069 ORTHO05D001421 9.9e-07 57.4 128 28.1
ECA240G0352 Erigeron canadensis HOM05D021710 ORTHO05D002997 1.3e-06 57.0 133 24.1
ECA246G4161 Erigeron canadensis HOM05D002069 ORTHO05D001421 1.3e-06 57.0 90 30.0
ECA247G1374 Erigeron canadensis HOM05D000045 ORTHO05D001421 1.3e-06 57.0 132 32.6
Lsat_1_v5_gn_4_110341 Lactuca sativa HOM05D002069 ORTHO05D001421 1.3e-06 57.0 128 27.3
Lsat_1_v5_gn_8_18440 Lactuca sativa HOM05D002069 ORTHO05D001421 1.3e-06 57.0 91 33.0
Lsat_1_v5_gn_4_129521 Lactuca sativa HOM05D005502 ORTHO05D001421 1.7e-06 56.6 116 29.3
DCAR_005154 Daucus carota HOM05D002069 ORTHO05D010791 2.2e-06 56.2 134 29.9
HanXRQChr17g0543571 Helianthus annuus HOM05D006463 ORTHO05D002997 2.2e-06 56.2 134 27.6
Hund08122 Selenicereus undatus HOM05D008410 ORTHO05D002997 2.2e-06 56.2 138 26.1
Hund23563 Selenicereus undatus HOM05D008410 ORTHO05D002997 2.2e-06 56.2 138 26.1
ECA240G2781 Erigeron canadensis HOM05D000006 ORTHO05D000091 2.9e-06 55.8 131 31.3
ECA246G2312 Erigeron canadensis HOM05D002069 ORTHO05D001421 2.9e-06 55.8 134 26.1
Lsat_1_v5_gn_6_54740 Lactuca sativa HOM05D005502 ORTHO05D001421 3.8e-06 55.5 118 28.0
AUR62022349 Chenopodium quinoa HOM05D006463 ORTHO05D002997 6.4e-06 54.7 134 28.4
DCAR_028623 Daucus carota HOM05D002069 ORTHO05D002997 6.4e-06 54.7 67 37.3
Lsat_1_v5_gn_5_154201 Lactuca sativa HOM05D005502 ORTHO05D001421 6.4e-06 54.7 116 28.4
Hund01568 Selenicereus undatus HOM05D008410 ORTHO05D002997 6.4e-06 54.7 140 26.4
DCAR_001038 Daucus carota HOM05D006463 ORTHO05D010791 8.4e-06 54.3 92 30.4
ECA236G0566 Erigeron canadensis HOM05D002069 ORTHO05D001421 8.4e-06 54.3 132 31.8
ECA236G4158 Erigeron canadensis HOM05D000006 ORTHO05D000091 8.4e-06 54.3 132 32.6
Lsat_1_v5_gn_1_64161 Lactuca sativa HOM05D002069 ORTHO05D001421 8.4e-06 54.3 128 26.6


User provided reference genes

Program Settings