Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_005041 Daucus carota HOM05D007666 ORTHO05D009567 4.7e-121 438.0 232 100.0
Dinv38838 Davidia involucrata HOM05D007666 ORTHO05D009567 1.3e-54 217.2 200 56.5
GSVIVG01019521001 Vitis vinifera HOM05D007666 ORTHO05D009567 5.4e-53 211.8 202 52.5
CSS0011760 Camellia sinensis var. sinensis HOM05D007666 ORTHO05D009567 2.7e-52 209.5 206 53.4
Rhsim02G0242700 Rhododendron simsii HOM05D007666 ORTHO05D009567 8.7e-51 204.5 206 54.9
Cpa.g.sc79.41 Carica papaya HOM05D007666 ORTHO05D009567 1.1e-50 204.1 202 53.5
Lj2C168T16 Lonicera japonica HOM05D007666 ORTHO05D009567 5.6e-50 201.8 206 54.9
Potri.001G092300 Populus trichocarpa HOM05D007666 ORTHO05D009567 2.0e-47 193.4 204 53.4
Duzib068G1371 Durio zibethinus HOM05D007666 ORTHO05D009567 2.9e-46 189.5 202 48.5
Thecc.03G296800 Theobroma cacao HOM05D007666 ORTHO05D009567 1.1e-45 187.6 202 48.0
Prupe.5G117900 Prunus persica HOM05D007666 ORTHO05D009567 2.4e-45 186.4 202 51.0
Potri.003G139400 Populus trichocarpa HOM05D007666 ORTHO05D009567 3.2e-45 186.0 203 50.2
CiPaw.12G083800 Carya illinoinensis HOM05D007666 ORTHO05D009567 4.2e-45 185.7 207 46.4
Gorai.003G080900 Gossypium raimondii HOM05D007666 ORTHO05D009567 1.1e-42 177.6 204 48.0
Sabra03G0100600 Salix brachista HOM05D007666 ORTHO05D009567 1.1e-42 177.6 203 50.2
HanXRQChr06g0166511 Helianthus annuus HOM05D007666 ORTHO05D009567 1.5e-42 177.2 228 44.3
Gohir.D03G082600 Gossypium hirsutum HOM05D007666 ORTHO05D009567 1.9e-42 176.8 204 48.0
Atru.chr9.2008 Acer truncatum HOM05D007666 ORTHO05D009567 2.5e-42 176.4 208 51.9
Aqoxy5G04207 Aquilegia oxysepala HOM05D007666 ORTHO05D009567 9.6e-42 174.5 202 48.5
Hma1.2p1_0229F.1_g097150 Hydrangea macrophylla HOM05D007666 ORTHO05D009567 2.1e-41 173.3 202 51.5
Actinidia22150 Actinidia chinensis HOM05D007666 ORTHO05D009567 2.8e-41 172.9 202 49.0
Manes.01G049375 Manihot esculenta HOM05D007666 ORTHO05D009567 3.7e-41 172.6 201 47.8
TAR636G3598 Trochodendron aralioides HOM05D007666 ORTHO05D009567 1.1e-40 171.0 199 49.7
QL02p030815 Quercus lobata HOM05D007666 ORTHO05D009567 1.4e-40 170.6 223 45.7
ClCG07G014990 Citrullus lanatus HOM05D007666 ORTHO05D009567 6.9e-40 168.3 202 46.5
MELO3C016286.2 Cucumis melo HOM05D007666 ORTHO05D009567 6.9e-40 168.3 205 47.8
MD06G1105600 Malus domestica HOM05D007666 ORTHO05D009567 9.0e-40 167.9 223 43.9
CsaV3_4G006520 Cucumis sativus L. HOM05D007666 ORTHO05D009567 2.6e-39 166.4 205 46.8
Ciclev10020669m.g Citrus clementina HOM05D007666 ORTHO05D009567 2.2e-38 163.3 205 47.3
MSTRG.25667 Avicennia marina HOM05D007666 ORTHO05D009567 2.9e-38 162.9 203 46.8
Gohir.A02G101700 Gossypium hirsutum HOM05D007666 ORTHO05D009567 1.4e-37 160.6 204 46.6
FAN08G0521 Fragaria x ananassa HOM05D007666 ORTHO05D009567 2.4e-37 159.8 205 48.3
Gorai.006G207700 Gossypium raimondii HOM05D007666 ORTHO05D009567 2.4e-37 159.8 197 46.7
RcHm_v2.0_Chr7g0195021 Rosa chinensis HOM05D007666 ORTHO05D009567 2.4e-37 159.8 205 48.3
FvH4_5g04480 Fragaria vesca HOM05D007666 ORTHO05D009567 3.2e-37 159.5 205 48.3
FAN18G2245 Fragaria x ananassa HOM05D007666 ORTHO05D009567 3.2e-37 159.5 205 48.3
Ah.07g197340 Amaranthus hybridus HOM05D007666 ORTHO05D009567 5.5e-37 158.7 202 44.6
FAN13G3316 Fragaria x ananassa HOM05D007666 ORTHO05D009567 9.3e-37 157.9 205 48.3
Nitab4.5_0005537g0030 Nicotiana tabacum HOM05D007666 ORTHO05D009567 9.3e-37 157.9 202 49.5
FAN18G0717 Fragaria x ananassa HOM05D007666 ORTHO05D009567 1.2e-36 157.5 205 47.8
CiPaw.11G122000 Carya illinoinensis HOM05D007666 ORTHO05D009567 1.6e-36 157.1 196 46.9
Gohir.A09G190500 Gossypium hirsutum HOM05D007666 ORTHO05D009567 1.6e-36 157.1 196 44.9
PSO135G0060 Papaver somniferum HOM05D007666 ORTHO05D009567 3.5e-36 156.0 208 43.3
PSO384G2287 Papaver somniferum HOM05D007666 ORTHO05D009567 3.5e-36 156.0 208 43.3
EL10Ac5g12908 Beta vulgaris HOM05D007666 ORTHO05D009567 6.0e-36 155.2 202 44.6
Nitab4.5_0001231g0060 Nicotiana tabacum HOM05D007666 ORTHO05D009567 7.9e-36 154.8 202 48.5
TWI60G1340 Tripterygium wilfordii HOM05D007666 ORTHO05D009567 1.0e-35 154.5 203 45.8
Gohir.D09G185200 Gossypium hirsutum HOM05D007666 ORTHO05D009567 3.9e-35 152.5 196 43.9
Peaxi162Scf00074g00106 Petunia axillaris HOM05D007666 ORTHO05D009567 3.9e-35 152.5 202 46.0
Cc08_g15990 Coffea canephora HOM05D007666 ORTHO05D009567 1.5e-34 150.6 201 45.8
Sopen08g030510 Solanum pennellii HOM05D007666 ORTHO05D009567 1.9e-34 150.2 202 48.0
PGSC0003DMG400012289 Solanum tuberosum HOM05D007666 ORTHO05D009567 1.9e-34 150.2 202 48.0
ECA246G0366 Erigeron canadensis HOM05D007666 ORTHO05D009567 2.5e-34 149.8 228 40.8
Sed0007649 Sechium edule HOM05D007666 ORTHO05D009567 2.5e-34 149.8 203 43.3
SGA_v2.0_scaffold305G47963 Striga asiatica HOM05D007666 ORTHO05D009567 2.5e-34 149.8 203 45.8
vmacro11431 Vaccinium macrocarpon HOM05D007666 ORTHO05D009567 3.3e-34 149.4 179 46.9
Migut.A00661 Erythranthe guttata HOM05D007666 ORTHO05D009567 1.3e-33 147.5 204 44.1
Sed0008321 Sechium edule HOM05D007666 ORTHO05D009567 6.2e-33 145.2 213 42.7
AUR62019830 Chenopodium quinoa HOM05D007666 ORTHO05D009567 9.0e-32 141.4 225 39.6
Lsat_1_v5_gn_3_10540 Lactuca sativa HOM05D007666 ORTHO05D009567 2.0e-31 140.2 208 42.8
Nn3g19029 Nelumbo nucifera HOM05D007666 ORTHO05D009567 1.3e-30 137.5 158 46.2
Atru.chr2.3612 Acer truncatum HOM05D007666 ORTHO05D009567 2.9e-30 136.3 165 52.1
Aa31LG2G1390 Aethionema arabicum HOM05D007666 ORTHO05D009567 2.9e-30 136.3 211 43.6
MBI07_g38452_MAGBIO Magnolia biondii HOM05D007666 ORTHO05D009567 2.9e-30 136.3 199 41.2
Hund14226 Selenicereus undatus HOM05D007666 ORTHO05D009567 2.9e-30 136.3 204 40.7
AUR62010832 Chenopodium quinoa HOM05D007666 ORTHO05D009567 3.8e-30 136.0 202 40.1
AL2G10470 Arabidopsis lyrata HOM05D007666 ORTHO05D009567 5.5e-29 132.1 214 42.5
AT1G64385 Arabidopsis thaliana HOM05D007666 ORTHO05D009567 1.8e-27 127.1 215 40.9
Thhalv10023582m.g Eutrema salsugineum HOM05D007666 ORTHO05D009567 1.5e-26 124.0 216 38.9
CARHR046550 Cardamine hirsuta HOM05D007666 ORTHO05D009567 2.5e-26 123.2 214 39.3
C09p17230 Brassica napus HOM05D007666 ORTHO05D009567 4.3e-26 122.5 212 41.5
BolC9t54623H Brassica oleracea HOM05D007666 ORTHO05D009567 4.3e-26 122.5 212 41.5
Carub.0002s0039 Capsella rubella HOM05D007666 ORTHO05D009567 4.3e-26 122.5 215 39.5
MD14G1127900 Malus domestica HOM05D007666 ORTHO05D009567 9.7e-26 121.3 186 40.3
SalBow1G7426 Salvia bowleyana HOM05D007666 ORTHO05D009567 1.3e-25 120.9 203 39.4
A09p14330 Brassica napus HOM05D007666 ORTHO05D009567 1.6e-25 120.6 212 40.1
THA.LOC104817649 Tarenaya hassleriana HOM05D007666 ORTHO05D009567 2.8e-25 119.8 226 41.6
BcaC04g22624 Brassica carinata HOM05D007666 ORTHO05D009567 4.8e-25 119.0 212 39.6
Duzib205G0056 Durio zibethinus HOM05D007666 ORTHO05D009567 8.2e-25 118.2 203 38.4
SpUn0393_0010 Schrenkiella parvula HOM05D007666 ORTHO05D009567 1.8e-24 117.1 214 40.7
BcaB07g31505 Brassica carinata HOM05D007666 ORTHO05D009567 3.1e-24 116.3 214 39.7
BraA09t37080Z Brassica rapa HOM05D007666 ORTHO05D009567 4.1e-24 115.9 213 39.9
COL.COLO4_10690 Corchorus olitorius HOM05D007666 ORTHO05D009567 3.4e-23 112.8 205 39.0
HPP92_005518 Vanilla planifolia HOM05D007666 ORTHO05D009567 1.1e-21 107.8 198 34.3
ATR0188G013 Amborella trichopoda HOM05D007666 ORTHO05D009567 5.5e-21 105.5 198 35.9
Dinv37538 Davidia involucrata HOM05D007666 ORTHO05D009567 1.2e-20 104.4 81 60.5
Zm00001eb344230 Zea mays HOM05D007666 ORTHO05D009567 1.9e-18 97.1 206 36.9
Aqoxy4G02429 Aquilegia oxysepala HOM05D003589 ORTHO05D005170 2.5e-13 80.1 204 32.4
Dinv16976 Davidia involucrata HOM05D003589 ORTHO05D005170 5.5e-13 79.0 201 31.8
Solyc08g082240.1 Solanum lycopersicum HOM05D007666 ORTHO05D009567 1.0e-11 74.7 97 50.5
vmacro08941 Vaccinium macrocarpon HOM05D003589 ORTHO05D005170 1.8e-11 73.9 197 33.0
Sc20g0006980 Simmondsia chinensis HOM05D003589 ORTHO05D005170 3.0e-11 73.2 196 32.1
Actinidia04207 Actinidia chinensis HOM05D007666 ORTHO05D009567 8.8e-11 71.6 65 55.4
ATR1127G101 Amborella trichopoda HOM05D003589 ORTHO05D005170 8.8e-11 71.6 203 30.0
SEGI_11810 Sequoiadendron giganteum HOM05D003589 ORTHO05D005170 2.0e-10 70.5 198 28.8
Potri.016G136900 Populus trichocarpa HOM05D003589 ORTHO05D005170 2.6e-10 70.1 199 27.6
Manes.09G118000 Manihot esculenta HOM05D003589 ORTHO05D005170 4.4e-10 69.3 196 30.6
SalBow5G3966 Salvia bowleyana HOM05D003589 ORTHO05D005170 8.2e-09 65.1 199 26.1
SGA_v2.0_scaffold85G26610 Striga asiatica HOM05D003589 ORTHO05D005170 1.8e-08 63.9 196 24.5
FAN05G1200 Fragaria x ananassa HOM05D003589 ORTHO05D005170 3.1e-08 63.2 201 27.4
Psat3g118720 Pisum sativum HOM05D003589 ORTHO05D005170 2.6e-07 60.1 203 27.6
AagrBONN_evm.TU.Sc2ySwM_368.250 Anthoceros agrestis HOM05D029953 ORTHO05D009567 5.9e-07 58.9 236 23.3
MD04G1174800 Malus domestica HOM05D003589 ORTHO05D005170 1.7e-06 57.4 194 28.4
Ca_02266_v3 Cicer arietinum L. HOM05D003589 ORTHO05D005170 3.8e-06 56.2 158 32.3
Phvul.008G082600 Phaseolus vulgaris HOM05D003589 ORTHO05D005170 3.8e-06 56.2 213 25.8


User provided reference genes

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