Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_004989 Daucus carota HOM05D006677 ORTHO05D008348 0.0e+00 1566.6 782 100.0
Lj2C223G6 Lonicera japonica HOM05D006677 ORTHO05D008348 1.9e-275 952.6 795 62.0
Hma1.2p1_0316F.1_g122840 Hydrangea macrophylla HOM05D006677 ORTHO05D008348 4.4e-272 941.4 790 59.7
CSS0025591 Camellia sinensis var. sinensis HOM05D006677 ORTHO05D008348 4.8e-271 937.9 786 60.6
Nitab4.5_0001381g0100 Nicotiana tabacum HOM05D006677 ORTHO05D008348 1.8e-270 936.0 794 60.5
Peaxi162Scf00209g00130 Petunia axillaris HOM05D006677 ORTHO05D008348 7.0e-270 934.1 786 60.2
CAN.G1178.20 Capsicum annuum HOM05D006677 ORTHO05D008348 2.2e-268 929.1 796 60.2
Solyc08g078440.3 Solanum lycopersicum HOM05D006677 ORTHO05D008348 6.1e-266 921.0 794 59.9
Sopen08g026930 Solanum pennellii HOM05D006677 ORTHO05D008348 6.1e-266 921.0 789 59.9
CSS0006614 Camellia sinensis var. sinensis HOM05D006677 ORTHO05D008348 3.7e-263 911.8 786 59.3
Migut.A01134 Erythranthe guttata HOM05D006677 ORTHO05D008348 7.0e-262 907.5 801 58.1
CANSAT21G0792 Cannabis sativa HOM05D006677 ORTHO05D008348 1.3e-260 903.3 801 56.7
SGA_v2.0_scaffold104G30177 Striga asiatica HOM05D006677 ORTHO05D008348 1.9e-259 899.4 812 56.4
MSTRG.12123 Avicennia marina HOM05D006677 ORTHO05D008348 3.3e-259 898.7 785 58.3
COL.COLO4_37128 Corchorus olitorius HOM05D006677 ORTHO05D008348 3.6e-258 895.2 797 56.7
Thecc.03G248200 Theobroma cacao HOM05D006677 ORTHO05D008348 2.3e-257 892.5 793 56.6
Rhsim07G0111300 Rhododendron simsii HOM05D006677 ORTHO05D008348 3.0e-257 892.1 792 58.5
Cc08_g12180 Coffea canephora HOM05D006677 ORTHO05D008348 5.2e-257 891.3 782 56.9
TAR374G0600 Trochodendron aralioides HOM05D006677 ORTHO05D008348 2.0e-256 889.4 800 57.8
vmacro14066 Vaccinium macrocarpon HOM05D006677 ORTHO05D008348 3.7e-255 885.2 787 57.4
Nitab4.5_0002289g0120 Nicotiana tabacum HOM05D006677 ORTHO05D008348 1.1e-254 883.6 798 58.5
Rhsim07G0110800 Rhododendron simsii HOM05D006677 ORTHO05D008348 2.0e-253 879.4 813 56.8
Prupe.5G065400 Prunus persica HOM05D006677 ORTHO05D008348 7.8e-253 877.5 801 57.4
Gohir.D12G218100 Gossypium hirsutum HOM05D006677 ORTHO05D008348 1.9e-251 872.8 795 55.5
MD06G1053300 Malus domestica HOM05D006677 ORTHO05D008348 1.9e-251 872.8 803 56.8
Gorai.008G233700 Gossypium raimondii HOM05D006677 ORTHO05D008348 5.6e-251 871.3 795 55.6
MD04G1060300 Malus domestica HOM05D006677 ORTHO05D008348 1.4e-249 866.7 803 56.4
Duzib068G0477 Durio zibethinus HOM05D006677 ORTHO05D008348 7.5e-248 860.9 797 55.5
Gohir.A12G215500 Gossypium hirsutum HOM05D006677 ORTHO05D008348 3.7e-247 858.6 792 55.3
Manes.02G041400 Manihot esculenta HOM05D006677 ORTHO05D008348 1.4e-246 856.7 797 55.3
Nn6g33880 Nelumbo nucifera HOM05D006677 ORTHO05D008348 4.1e-246 855.1 801 55.2
RcHm_v2.0_Chr7g0203921 Rosa chinensis HOM05D006677 ORTHO05D008348 4.6e-245 851.7 788 55.5
Cfa012688 Carpinus fangiana HOM05D006677 ORTHO05D008348 1.3e-244 850.1 794 56.7
FAN13G0013 Fragaria x ananassa HOM05D006677 ORTHO05D008348 1.3e-244 850.1 795 55.0
FAN04G1892 Fragaria x ananassa HOM05D006677 ORTHO05D008348 2.3e-244 849.4 792 55.2
PGR031G0681 Punica granatum HOM05D006677 ORTHO05D008348 2.5e-243 845.9 795 54.5
Dinv21656 Davidia involucrata HOM05D006677 ORTHO05D008348 3.3e-243 845.5 647 66.3
SalBow6G5281 Salvia bowleyana HOM05D006677 ORTHO05D008348 3.6e-242 842.0 845 51.5
FvH4_5g19410 Fragaria vesca HOM05D006677 ORTHO05D008348 6.2e-242 841.3 792 54.7
Atru.chr9.1276 Acer truncatum HOM05D006677 ORTHO05D008348 1.1e-241 840.5 797 54.2
FAN08G3018 Fragaria x ananassa HOM05D006677 ORTHO05D008348 2.3e-241 839.3 792 54.7
QL12p011426 Quercus lobata HOM05D006677 ORTHO05D008348 5.2e-241 838.2 848 52.4
FAN18G1193 Fragaria x ananassa HOM05D006677 ORTHO05D008348 6.8e-241 837.8 792 54.4
HanXRQChr16g0501081 Helianthus annuus HOM05D006677 ORTHO05D008348 1.3e-239 833.6 789 55.4
Hund14577 Selenicereus undatus HOM05D006677 ORTHO05D008348 1.4e-238 830.1 784 53.4
Sc22g0000980 Simmondsia chinensis HOM05D006677 ORTHO05D008348 1.9e-238 829.7 788 54.1
Ciclev10018892m.g Citrus clementina HOM05D006677 ORTHO05D008348 3.2e-238 828.9 800 53.0
Haze_07944 Corylus avellana HOM05D006677 ORTHO05D008348 4.1e-238 828.6 856 52.3
TWI60G0317 Tripterygium wilfordii HOM05D006677 ORTHO05D008348 7.0e-238 827.8 791 53.4
arahy.Tifrunner.gnm1.ann1.WU4RWF Arachis hypogaea HOM05D006677 ORTHO05D008348 1.6e-237 826.6 807 52.8
AUR62019973 Chenopodium quinoa HOM05D006677 ORTHO05D008348 1.6e-237 826.6 790 53.4
Lsat_1_v5_gn_6_18041 Lactuca sativa HOM05D006677 ORTHO05D008348 2.1e-237 826.2 792 55.2
AUR62007111 Chenopodium quinoa HOM05D006677 ORTHO05D008348 4.6e-237 825.1 790 53.3
Duzib205G2017 Durio zibethinus HOM05D006677 ORTHO05D008348 1.9e-235 819.7 797 53.6
Ah.12g054330 Amaranthus hybridus HOM05D006677 ORTHO05D008348 1.6e-234 816.6 795 53.0
arahy.Tifrunner.gnm1.ann1.IBE8NF Arachis hypogaea HOM05D006677 ORTHO05D008348 2.8e-234 815.8 807 52.3
EL10Ac5g12357 Beta vulgaris HOM05D006677 ORTHO05D008348 6.2e-234 814.7 790 52.7
Potri.001G155800 Populus trichocarpa HOM05D006677 ORTHO05D008348 2.3e-233 812.8 799 53.2
Aqoxy7G00821 Aquilegia oxysepala HOM05D006677 ORTHO05D008348 6.8e-233 811.2 799 53.3
ECA233G6125 Erigeron canadensis HOM05D006677 ORTHO05D008348 1.9e-230 803.1 741 56.7
CiPaw.12G050300 Carya illinoinensis HOM05D006677 ORTHO05D008348 5.4e-230 801.6 787 54.0
Lj4g0000262 Lotus japonicus HOM05D006677 ORTHO05D008348 2.1e-229 799.7 787 52.2
THA.LOC104806670 Tarenaya hassleriana HOM05D006677 ORTHO05D008348 2.7e-229 799.3 789 51.6
HanXRQChr08g0227751 Helianthus annuus HOM05D006677 ORTHO05D008348 1.1e-225 787.3 795 53.1
Ca_21980_v3 Cicer arietinum L. HOM05D006677 ORTHO05D008348 1.4e-225 786.9 794 51.5
Actinidia26803 Actinidia chinensis HOM05D006677 ORTHO05D008348 2.9e-223 779.2 634 62.1
AL8G10640 Arabidopsis lyrata HOM05D006677 ORTHO05D008348 2.9e-223 779.2 796 51.0
Lalb_Chr05g0221161 Lupinus albus HOM05D006677 ORTHO05D008348 6.4e-223 778.1 786 51.9
Medtr4g100700 Medicago truncatula HOM05D006677 ORTHO05D008348 2.3e-220 769.6 794 50.5
AT5G47400 Arabidopsis thaliana HOM05D006677 ORTHO05D008348 6.6e-220 768.1 796 49.9
C07p31040 Brassica napus HOM05D006677 ORTHO05D008348 1.1e-219 767.3 789 50.6
Thhalv10000783m.g Eutrema salsugineum HOM05D006677 ORTHO05D008348 1.1e-219 767.3 795 50.1
BcaC06g34255 Brassica carinata HOM05D006677 ORTHO05D008348 1.5e-219 766.9 793 50.4
BolC7t43648H Brassica oleracea HOM05D006677 ORTHO05D008348 1.5e-219 766.9 789 50.7
Carub.0008s0038 Capsella rubella HOM05D006677 ORTHO05D008348 3.3e-219 765.8 793 49.8
CARHR173970 Cardamine hirsuta HOM05D006677 ORTHO05D008348 4.3e-219 765.4 797 49.4
Oeu017057.2 Olea europaea HOM05D006677 ORTHO05D008348 5.3e-217 758.4 824 51.2
Sp2g12115 Schrenkiella parvula HOM05D006677 ORTHO05D008348 6.9e-217 758.1 795 49.3
A06p45110 Brassica napus HOM05D006677 ORTHO05D008348 2.0e-216 756.5 793 50.1
Manes.01G083200 Manihot esculenta HOM05D006677 ORTHO05D008348 4.9e-215 751.9 801 49.6
BraA06t27381Z Brassica rapa HOM05D006677 ORTHO05D008348 1.6e-213 746.9 788 49.7
Glyma.17G143800 Glycine max HOM05D006677 ORTHO05D008348 2.8e-210 736.1 797 49.8
Psat4g072920 Pisum sativum HOM05D006677 ORTHO05D008348 2.6e-208 729.6 773 49.4
Aa31sc151G40 Aethionema arabicum HOM05D006677 ORTHO05D008348 7.6e-208 728.0 755 50.3
CDE11G0086 Ceratophyllum demersum HOM05D006677 ORTHO05D008348 2.1e-205 719.9 772 47.7
VMungo0251G0668 Vigna mungo HOM05D006677 ORTHO05D008348 3.7e-202 709.1 783 49.3
Phvul.003G222500 Phaseolus vulgaris HOM05D006677 ORTHO05D008348 1.1e-201 707.6 785 49.6
BcaC06g31390 Brassica carinata HOM05D006677 ORTHO05D008348 2.5e-190 669.8 666 51.7
HPP92_022463 Vanilla planifolia HOM05D006677 ORTHO05D008348 5.3e-185 652.1 805 45.0
Eucgr.D02100 Eucalyptus grandis HOM05D006677 ORTHO05D008348 7.7e-184 648.3 584 58.4
BcaC06g31392 Brassica carinata HOM05D006677 ORTHO05D008348 6.5e-183 645.2 780 45.6
Sabra01G0125500 Salix brachista HOM05D006677 ORTHO05D008348 2.8e-178 629.8 643 52.6
ATR0057G118 Amborella trichopoda HOM05D006677 ORTHO05D008348 3.3e-163 579.7 797 42.3
DCAR_004979 Daucus carota HOM05D006677 ORTHO05D008348 1.7e-154 550.8 290 95.2
DCAR_004986 Daucus carota HOM05D006677 ORTHO05D008348 1.7e-154 550.8 290 95.2
Zm00001eb000330 Zea mays HOM05D006677 ORTHO05D008348 1.5e-150 537.7 777 40.4
Glyma.05G062000 Glycine max HOM05D006677 ORTHO05D008348 7.2e-150 535.4 595 49.6
Actinidia10841 Actinidia chinensis HOM05D006677 ORTHO05D008348 4.5e-136 489.6 788 40.1
unitig_21.g20314 Utricularia gibba HOM05D006677 ORTHO05D008348 4.1e-121 439.9 791 34.9
DCAR_004983 Daucus carota HOM05D006677 ORTHO05D008348 6.2e-109 399.4 229 90.4
DCAR_004974 Daucus carota HOM05D006677 ORTHO05D008348 3.4e-107 393.7 212 95.3
Pp3c19_23280 Physcomitrium patens HOM05D006677 ORTHO05D008348 9.9e-99 365.5 866 32.3
TPR.G36090 Trifolium pratense HOM05D006677 ORTHO05D008348 8.1e-85 319.3 407 44.2
TPR.G37689 Trifolium pratense HOM05D006677 ORTHO05D008348 1.8e-84 318.2 301 52.5
GSVIVG01006275001 Vitis vinifera HOM05D006677 ORTHO05D000005 1.5e-78 298.5 252 59.1
AagrBONN_evm.TU.Sc2ySwM_228.2440 Anthoceros agrestis HOM05D006677 ORTHO05D008348 1.9e-78 298.1 846 28.8
Cpa.g.sc3684.1 Carica papaya HOM05D006677 ORTHO05D008348 6.2e-77 293.1 253 56.5
GSVIVG01006276001 Vitis vinifera HOM05D006677 ORTHO05D008348 2.1e-72 278.1 253 54.9
TAR365G0661 Trochodendron aralioides HOM05D006677 ORTHO05D008348 3.3e-70 270.8 281 51.6
TAR633G2042 Trochodendron aralioides HOM05D006677 ORTHO05D008348 4.1e-52 210.7 184 59.2
DCAR_004972 Daucus carota HOM05D006677 ORTHO05D008348 1.3e-50 205.7 120 90.8
DCAR_004984 Daucus carota HOM05D006677 ORTHO05D008348 1.1e-41 176.0 87 96.6
Os10g0560500 Oryza sativa ssp. japonica HOM05D006677 ORTHO05D008348 6.3e-37 160.2 269 38.7
CBR_g16835 Chara braunii HOM05D000019 ORTHO05D000048 8.3e-37 159.8 997 22.4
CAN.G26.36 Capsicum annuum HOM05D006677 ORTHO05D008348 1.4e-36 159.1 169 51.5
TAR629G1120 Trochodendron aralioides HOM05D006677 ORTHO05D008348 1.5e-33 149.1 133 54.1
Cre06.g278126 Chlamydomonas reinhardtii HOM05D006677 ORTHO05D008348 1.7e-13 82.4 183 31.1
CAN.G1178.24 Capsicum annuum HOM05D006677 ORTHO05D008348 4.9e-13 80.9 66 51.5
ECA233G4789 Erigeron canadensis HOM05D006677 ORTHO05D008348 7.8e-11 73.6 50 72.0
MCO13G224 Micromonas commoda HOM05D006677 ORTHO05D008348 3.0e-10 71.6 135 31.9
ECA234G1619 Erigeron canadensis HOM05D000206 ORTHO05D000232 5.0e-10 70.9 49 67.3
TPR.G36480 Trifolium pratense HOM05D004733 ORTHO05D008348 5.6e-09 67.4 46 63.0


User provided reference genes

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