Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_004979 Daucus carota HOM05D006677 ORTHO05D008348 1.2e-166 589.7 298 100.0
DCAR_004986 Daucus carota HOM05D006677 ORTHO05D008348 4.5e-161 571.2 298 96.0
DCAR_004989 Daucus carota HOM05D006677 ORTHO05D008348 8.3e-155 550.4 290 95.2
DCAR_004983 Daucus carota HOM05D006677 ORTHO05D008348 2.4e-106 389.4 207 94.7
DCAR_004974 Daucus carota HOM05D006677 ORTHO05D008348 3.2e-106 389.0 209 94.3
Peaxi162Scf00209g00130 Petunia axillaris HOM05D006677 ORTHO05D008348 1.5e-95 353.6 289 58.5
QL12p011426 Quercus lobata HOM05D006677 ORTHO05D008348 1.4e-93 347.1 285 59.6
Cfa012688 Carpinus fangiana HOM05D006677 ORTHO05D008348 5.8e-92 341.7 286 59.8
Haze_07944 Corylus avellana HOM05D006677 ORTHO05D008348 3.8e-91 339.0 293 58.4
Cc08_g12180 Coffea canephora HOM05D006677 ORTHO05D008348 6.5e-91 338.2 282 60.6
Thecc.03G248200 Theobroma cacao HOM05D006677 ORTHO05D008348 1.4e-90 337.0 290 58.3
CSS0006614 Camellia sinensis var. sinensis HOM05D006677 ORTHO05D008348 2.5e-90 336.3 289 58.5
CSS0025591 Camellia sinensis var. sinensis HOM05D006677 ORTHO05D008348 2.5e-90 336.3 289 58.5
COL.COLO4_37128 Corchorus olitorius HOM05D006677 ORTHO05D008348 2.5e-90 336.3 288 58.3
Prupe.5G065400 Prunus persica HOM05D006677 ORTHO05D008348 3.2e-90 335.9 289 59.9
Manes.02G041400 Manihot esculenta HOM05D006677 ORTHO05D008348 4.2e-90 335.5 288 57.6
Nitab4.5_0001381g0100 Nicotiana tabacum HOM05D006677 ORTHO05D008348 1.6e-89 333.6 291 58.1
TAR374G0600 Trochodendron aralioides HOM05D006677 ORTHO05D008348 1.6e-89 333.6 289 57.8
CANSAT21G0792 Cannabis sativa HOM05D006677 ORTHO05D008348 3.5e-89 332.4 289 55.4
Hma1.2p1_0316F.1_g122840 Hydrangea macrophylla HOM05D006677 ORTHO05D008348 6.0e-89 331.6 289 57.1
MSTRG.12123 Avicennia marina HOM05D006677 ORTHO05D008348 1.0e-88 330.9 286 58.4
CAN.G1178.20 Capsicum annuum HOM05D006677 ORTHO05D008348 3.9e-88 328.9 286 58.4
CiPaw.12G050300 Carya illinoinensis HOM05D006677 ORTHO05D008348 1.1e-87 327.4 289 56.7
Ca_21980_v3 Cicer arietinum L. HOM05D006677 ORTHO05D008348 1.9e-87 326.6 297 54.2
Lj2C223G6 Lonicera japonica HOM05D006677 ORTHO05D008348 4.3e-87 325.5 290 59.3
Solyc08g078440.3 Solanum lycopersicum HOM05D006677 ORTHO05D008348 4.3e-87 325.5 285 57.5
Sopen08g026930 Solanum pennellii HOM05D006677 ORTHO05D008348 5.7e-87 325.1 285 57.5
Nitab4.5_0002289g0120 Nicotiana tabacum HOM05D006677 ORTHO05D008348 9.6e-87 324.3 291 57.0
MD04G1060300 Malus domestica HOM05D006677 ORTHO05D008348 1.6e-86 323.6 289 57.4
Eucgr.D02100 Eucalyptus grandis HOM05D006677 ORTHO05D008348 2.1e-86 323.2 289 59.2
MD06G1053300 Malus domestica HOM05D006677 ORTHO05D008348 1.1e-85 320.9 289 57.8
Duzib068G0477 Durio zibethinus HOM05D006677 ORTHO05D008348 1.8e-85 320.1 288 55.9
Gorai.008G233700 Gossypium raimondii HOM05D006677 ORTHO05D008348 5.3e-85 318.5 292 55.5
Medtr4g100700 Medicago truncatula HOM05D006677 ORTHO05D008348 6.9e-85 318.2 297 53.2
Gohir.D12G218100 Gossypium hirsutum HOM05D006677 ORTHO05D008348 1.5e-84 317.0 292 55.1
Nn6g33880 Nelumbo nucifera HOM05D006677 ORTHO05D008348 2.0e-84 316.6 289 55.7
Phvul.003G222500 Phaseolus vulgaris HOM05D006677 ORTHO05D008348 2.6e-84 316.2 290 54.1
Psat4g072920 Pisum sativum HOM05D006677 ORTHO05D008348 2.6e-84 316.2 295 53.9
Ciclev10018892m.g Citrus clementina HOM05D006677 ORTHO05D008348 7.6e-84 314.7 289 56.1
Migut.A01134 Erythranthe guttata HOM05D006677 ORTHO05D008348 1.0e-83 314.3 298 56.0
VMungo0251G0668 Vigna mungo HOM05D006677 ORTHO05D008348 1.0e-83 314.3 289 53.6
Atru.chr9.1276 Acer truncatum HOM05D006677 ORTHO05D008348 2.9e-83 312.8 283 57.6
Gohir.A12G215500 Gossypium hirsutum HOM05D006677 ORTHO05D008348 3.8e-83 312.4 292 54.5
vmacro14066 Vaccinium macrocarpon HOM05D006677 ORTHO05D008348 3.8e-83 312.4 289 55.0
arahy.Tifrunner.gnm1.ann1.WU4RWF Arachis hypogaea HOM05D006677 ORTHO05D008348 5.0e-83 312.0 289 54.0
Rhsim07G0110800 Rhododendron simsii HOM05D006677 ORTHO05D008348 1.9e-82 310.1 289 56.4
Rhsim07G0111300 Rhododendron simsii HOM05D006677 ORTHO05D008348 1.9e-82 310.1 289 56.4
Lj4g0000262 Lotus japonicus HOM05D006677 ORTHO05D008348 3.2e-82 309.3 289 52.2
arahy.Tifrunner.gnm1.ann1.IBE8NF Arachis hypogaea HOM05D006677 ORTHO05D008348 9.3e-82 307.8 289 53.3
FAN13G0013 Fragaria x ananassa HOM05D006677 ORTHO05D008348 3.6e-81 305.8 290 53.1
SGA_v2.0_scaffold104G30177 Striga asiatica HOM05D006677 ORTHO05D008348 4.6e-81 305.4 310 52.9
FAN18G1193 Fragaria x ananassa HOM05D006677 ORTHO05D008348 6.1e-81 305.1 283 54.4
HanXRQChr16g0501081 Helianthus annuus HOM05D006677 ORTHO05D008348 6.1e-81 305.1 289 54.7
PGR031G0681 Punica granatum HOM05D006677 ORTHO05D008348 1.0e-80 304.3 289 54.3
TPR.G37689 Trifolium pratense HOM05D006677 ORTHO05D008348 1.0e-80 304.3 293 51.9
TWI60G0317 Tripterygium wilfordii HOM05D006677 ORTHO05D008348 1.8e-80 303.5 286 54.5
Lalb_Chr05g0221161 Lupinus albus HOM05D006677 ORTHO05D008348 2.3e-80 303.1 287 51.6
Potri.001G155800 Populus trichocarpa HOM05D006677 ORTHO05D008348 2.3e-80 303.1 292 53.8
FAN04G1892 Fragaria x ananassa HOM05D006677 ORTHO05D008348 3.0e-80 302.8 283 53.7
FvH4_5g19410 Fragaria vesca HOM05D006677 ORTHO05D008348 5.1e-80 302.0 283 54.1
Oeu017057.2 Olea europaea HOM05D006677 ORTHO05D008348 6.7e-80 301.6 291 56.4
RcHm_v2.0_Chr7g0203921 Rosa chinensis HOM05D006677 ORTHO05D008348 6.7e-80 301.6 284 55.3
FAN08G3018 Fragaria x ananassa HOM05D006677 ORTHO05D008348 1.5e-79 300.4 283 53.7
Glyma.17G143800 Glycine max HOM05D006677 ORTHO05D008348 1.1e-77 294.3 292 51.7
GSVIVG01006275001 Vitis vinifera HOM05D006677 ORTHO05D000005 3.1e-77 292.7 250 58.8
Ah.12g054330 Amaranthus hybridus HOM05D006677 ORTHO05D008348 5.3e-77 292.0 287 51.2
Hund14577 Selenicereus undatus HOM05D006677 ORTHO05D008348 5.3e-77 292.0 285 51.6
Aqoxy7G00821 Aquilegia oxysepala HOM05D006677 ORTHO05D008348 2.6e-76 289.7 289 50.5
AUR62007111 Chenopodium quinoa HOM05D006677 ORTHO05D008348 1.7e-75 287.0 285 51.2
Sabra01G0125500 Salix brachista HOM05D006677 ORTHO05D008348 1.7e-75 287.0 321 48.3
Cpa.g.sc3684.1 Carica papaya HOM05D006677 ORTHO05D008348 2.9e-75 286.2 251 55.4
Sc22g0000980 Simmondsia chinensis HOM05D006677 ORTHO05D008348 2.9e-75 286.2 287 51.6
AUR62019973 Chenopodium quinoa HOM05D006677 ORTHO05D008348 4.2e-74 282.3 285 50.9
Lsat_1_v5_gn_6_18041 Lactuca sativa HOM05D006677 ORTHO05D008348 7.2e-74 281.6 291 53.6
Duzib205G2017 Durio zibethinus HOM05D006677 ORTHO05D008348 4.6e-73 278.9 238 56.3
SalBow6G5281 Salvia bowleyana HOM05D006677 ORTHO05D008348 7.9e-73 278.1 341 44.6
EL10Ac5g12357 Beta vulgaris HOM05D006677 ORTHO05D008348 6.7e-72 275.0 285 49.5
AL8G10640 Arabidopsis lyrata HOM05D006677 ORTHO05D008348 8.8e-72 274.6 295 50.2
HanXRQChr08g0227751 Helianthus annuus HOM05D006677 ORTHO05D008348 2.0e-71 273.5 288 50.7
AT5G47400 Arabidopsis thaliana HOM05D006677 ORTHO05D008348 9.7e-71 271.2 294 49.7
Thhalv10000783m.g Eutrema salsugineum HOM05D006677 ORTHO05D008348 2.8e-70 269.6 295 49.2
ECA233G6125 Erigeron canadensis HOM05D006677 ORTHO05D008348 3.7e-70 269.2 234 58.5
A06p45110 Brassica napus HOM05D006677 ORTHO05D008348 1.8e-69 266.9 295 48.5
CARHR173970 Cardamine hirsuta HOM05D006677 ORTHO05D008348 1.8e-69 266.9 295 47.8
BraA06t27381Z Brassica rapa HOM05D006677 ORTHO05D008348 6.9e-69 265.0 290 49.0
Actinidia10841 Actinidia chinensis HOM05D006677 ORTHO05D008348 1.2e-68 264.2 289 49.1
BcaC06g34255 Brassica carinata HOM05D006677 ORTHO05D008348 1.5e-68 263.8 295 48.8
BolC7t43648H Brassica oleracea HOM05D006677 ORTHO05D008348 1.5e-68 263.8 290 50.0
Sp2g12115 Schrenkiella parvula HOM05D006677 ORTHO05D008348 2.0e-68 263.5 295 46.8
C07p31040 Brassica napus HOM05D006677 ORTHO05D008348 2.6e-68 263.1 290 49.3
Carub.0008s0038 Capsella rubella HOM05D006677 ORTHO05D008348 3.4e-68 262.7 295 47.1
BcaC06g31390 Brassica carinata HOM05D006677 ORTHO05D008348 3.2e-66 256.1 278 48.9
Manes.01G083200 Manihot esculenta HOM05D006677 ORTHO05D008348 2.7e-65 253.1 288 45.8
THA.LOC104806670 Tarenaya hassleriana HOM05D006677 ORTHO05D008348 6.1e-65 251.9 290 47.2
CDE11G0086 Ceratophyllum demersum HOM05D006677 ORTHO05D008348 5.7e-63 245.4 291 45.7
Aa31sc151G40 Aethionema arabicum HOM05D006677 ORTHO05D008348 1.8e-61 240.4 251 49.8
BcaC06g31392 Brassica carinata HOM05D006677 ORTHO05D008348 3.1e-61 239.6 283 46.6
HPP92_022463 Vanilla planifolia HOM05D006677 ORTHO05D008348 8.0e-57 224.9 295 43.4
Zm00001eb000330 Zea mays HOM05D006677 ORTHO05D008348 7.5e-55 218.4 293 42.3
ATR0057G118 Amborella trichopoda HOM05D006677 ORTHO05D008348 8.2e-54 214.9 310 41.3
Dinv21656 Davidia involucrata HOM05D006677 ORTHO05D008348 5.3e-53 212.2 144 72.9
DCAR_004972 Daucus carota HOM05D006677 ORTHO05D008348 1.0e-51 208.0 120 90.8
Actinidia26803 Actinidia chinensis HOM05D006677 ORTHO05D008348 8.3e-46 188.3 125 72.8
unitig_21.g20314 Utricularia gibba HOM05D006677 ORTHO05D008348 4.2e-42 176.0 291 37.1
DCAR_004984 Daucus carota HOM05D006677 ORTHO05D008348 4.7e-41 172.6 87 95.4
Glyma.05G062000 Glycine max HOM05D006677 ORTHO05D008348 2.0e-31 140.6 95 69.5
Pp3c19_23280 Physcomitrium patens HOM05D006677 ORTHO05D008348 5.8e-23 112.5 317 30.3
AagrBONN_evm.TU.Sc2ySwM_228.2440 Anthoceros agrestis HOM05D006677 ORTHO05D008348 5.4e-13 79.3 305 24.9
CAN.G1178.24 Capsicum annuum HOM05D006677 ORTHO05D008348 9.2e-13 78.6 67 47.8
ECA234G1619 Erigeron canadensis HOM05D000206 ORTHO05D000232 5.6e-10 69.3 50 68.0
ECA233G4789 Erigeron canadensis HOM05D006677 ORTHO05D008348 9.5e-10 68.6 49 71.4


User provided reference genes

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