Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_004888 Daucus carota HOM05D007192 ORTHO05D009034 8.8e-98 360.5 216 100.0
PSO541G1889 Papaver somniferum HOM05D007192 ORTHO05D009034 1.1e-42 177.6 213 58.2
PSO675G6515 Papaver somniferum HOM05D007192 ORTHO05D009034 6.9e-42 174.9 213 57.3
GSVIVG01003334001 Vitis vinifera HOM05D007192 ORTHO05D009034 1.2e-41 174.1 180 63.3
ClCG01G021480 Citrullus lanatus HOM05D007192 ORTHO05D009034 2.4e-39 166.4 210 53.8
TAR629G2173 Trochodendron aralioides HOM05D007192 ORTHO05D009034 9.3e-39 164.5 210 54.3
Hma1.2p1_0657F.1_g197140 Hydrangea macrophylla HOM05D007192 ORTHO05D009034 1.6e-38 163.7 208 51.9
PGR042G3283 Punica granatum HOM05D007192 ORTHO05D009034 3.5e-38 162.5 194 52.1
Oeu016820.1 Olea europaea HOM05D007192 ORTHO05D009034 4.6e-38 162.2 228 49.1
Cc09_g00850 Coffea canephora HOM05D007192 ORTHO05D009034 5.1e-37 158.7 221 56.6
Dinv07405 Davidia involucrata HOM05D007192 ORTHO05D009034 6.6e-37 158.3 215 51.2
CsaV3_6G048500 Cucumis sativus L. HOM05D007192 ORTHO05D009034 8.7e-37 157.9 213 54.5
Dinv13967 Davidia involucrata HOM05D001152 ORTHO05D000967 1.9e-36 156.8 204 50.0
Eucgr.E03926 Eucalyptus grandis HOM05D007192 ORTHO05D009034 1.3e-35 154.1 172 60.5
Prupe.4G010200 Prunus persica HOM05D007192 ORTHO05D009034 3.6e-35 152.5 210 52.4
MD05G1358000 Malus domestica HOM05D007192 ORTHO05D009034 1.1e-34 151.0 217 51.2
Nitab4.5_0000143g0180 Nicotiana tabacum HOM05D007192 ORTHO05D009034 2.4e-34 149.8 176 55.1
Ciclev10016735m.g Citrus clementina HOM05D007192 ORTHO05D009034 3.1e-34 149.4 178 57.9
MSTRG.14611 Avicennia marina HOM05D007192 ORTHO05D009034 4.0e-34 149.1 177 55.4
MELO3C007436.2 Cucumis melo HOM05D007192 ORTHO05D009034 4.0e-34 149.1 218 45.9
MD10G1331900 Malus domestica HOM05D007192 ORTHO05D009034 9.0e-34 147.9 212 52.8
Peaxi162Scf00352g00210 Petunia axillaris HOM05D007192 ORTHO05D009034 2.0e-33 146.7 212 45.8
Sabra06G0008700 Salix brachista HOM05D007192 ORTHO05D009034 2.0e-33 146.7 176 55.7
Solyc11g012280.2 Solanum lycopersicum HOM05D007192 ORTHO05D009034 2.6e-33 146.4 190 51.1
Potri.016G013500 Populus trichocarpa HOM05D007192 ORTHO05D009034 4.5e-33 145.6 176 55.1
PGSC0003DMG400013349 Solanum tuberosum HOM05D007192 ORTHO05D009034 4.5e-33 145.6 211 47.9
Nn1g07392 Nelumbo nucifera HOM05D007192 ORTHO05D009034 5.8e-33 145.2 205 49.8
Sopen11g007060 Solanum pennellii HOM05D007192 ORTHO05D009034 5.8e-33 145.2 190 50.5
Gohir.A06G205200 Gossypium hirsutum HOM05D007192 ORTHO05D009034 9.9e-33 144.4 173 57.8
SalBow8G5140 Salvia bowleyana HOM05D007192 ORTHO05D009034 9.9e-33 144.4 202 50.0
Nitab4.5_0011595g0010 Nicotiana tabacum HOM05D007192 ORTHO05D009034 1.7e-32 143.7 210 48.1
Gohir.D06G216300 Gossypium hirsutum HOM05D007192 ORTHO05D009034 2.2e-32 143.3 173 57.8
Gorai.010G249900 Gossypium raimondii HOM05D007192 ORTHO05D009034 2.2e-32 143.3 173 57.8
RcHm_v2.0_Chr5g0001481 Rosa chinensis HOM05D007192 ORTHO05D009034 6.4e-32 141.7 209 48.8
Thecc.06G233600 Theobroma cacao HOM05D007192 ORTHO05D009034 6.4e-32 141.7 192 54.7
TWI38G0802 Tripterygium wilfordii HOM05D007192 ORTHO05D009034 8.4e-32 141.4 179 53.1
Atru.chr1.2446 Acer truncatum HOM05D007192 ORTHO05D009034 1.4e-31 140.6 173 56.1
Hma1.2p1_0657F.1_g197150 Hydrangea macrophylla HOM05D007192 ORTHO05D009034 2.4e-31 139.8 263 41.1
QL05p069683 Quercus lobata HOM05D007192 ORTHO05D009034 2.4e-31 139.8 211 51.7
FvH4_3g00960 Fragaria vesca HOM05D007192 ORTHO05D009034 3.2e-31 139.4 179 52.0
HanXRQChr10g0285171 Helianthus annuus HOM05D007192 ORTHO05D009034 4.2e-31 139.0 170 55.9
Sed0016386 Sechium edule HOM05D007192 ORTHO05D009034 5.4e-31 138.7 191 48.7
Glyma.07G265300 Glycine max HOM05D007192 ORTHO05D009034 1.2e-30 137.5 178 52.2
CiPaw.09G102500 Carya illinoinensis HOM05D007192 ORTHO05D009034 3.5e-30 136.0 207 45.4
Duzib235G0907 Durio zibethinus HOM05D007192 ORTHO05D009034 3.5e-30 136.0 181 53.6
Sc24g0000280 Simmondsia chinensis HOM05D007192 ORTHO05D009034 4.6e-30 135.6 160 58.8
CANSAT56G2005 Cannabis sativa HOM05D007192 ORTHO05D009034 7.9e-30 134.8 211 50.7
Phvul.003G083700 Phaseolus vulgaris HOM05D007192 ORTHO05D009034 1.0e-29 134.4 179 50.8
Aqoxy2G00603 Aquilegia oxysepala HOM05D007192 ORTHO05D009034 1.3e-29 134.0 218 46.3
Haze_08662 Corylus avellana HOM05D007192 ORTHO05D009034 1.3e-29 134.0 203 51.2
Glyma.17G008700 Glycine max HOM05D007192 ORTHO05D009034 3.9e-29 132.5 178 51.7
Medtr4g133070 Medicago truncatula HOM05D007192 ORTHO05D009034 8.7e-29 131.3 177 52.0
Lj4g0002454 Lotus japonicus HOM05D007192 ORTHO05D009034 1.9e-28 130.2 212 46.7
Lsat_1_v5_gn_0_23500 Lactuca sativa HOM05D007192 ORTHO05D009034 5.6e-28 128.6 191 51.3
CDE06G1445 Ceratophyllum demersum HOM05D007060 ORTHO05D009087 7.4e-28 128.3 171 50.9
CDE08G0359 Ceratophyllum demersum HOM05D007192 ORTHO05D009034 1.6e-27 127.1 212 46.7
CAN.G1186.41 Capsicum annuum HOM05D007192 ORTHO05D009034 2.8e-27 126.3 149 54.4
ECA248G2945 Erigeron canadensis HOM05D007192 ORTHO05D009034 2.8e-27 126.3 192 47.4
BNapus_Darmor_BZH_scaffold_38p01780 Brassica napus HOM05D007192 ORTHO05D009034 2.4e-26 123.2 168 55.4
BraA02t05557Z Brassica rapa HOM05D007192 ORTHO05D009034 2.4e-26 123.2 168 55.4
TPR.G37116 Trifolium pratense HOM05D007192 ORTHO05D009034 3.1e-26 122.9 185 46.5
Rhsim02G0145900 Rhododendron simsii HOM05D007192 ORTHO05D009034 4.0e-26 122.5 199 43.7
Ah.14g087620 Amaranthus hybridus HOM05D007192 ORTHO05D009034 9.0e-26 121.3 208 46.6
Cfa000100 Carpinus fangiana HOM05D007192 ORTHO05D009034 9.0e-26 121.3 156 57.1
THA.LOC104799643 Tarenaya hassleriana HOM05D007192 ORTHO05D009034 9.0e-26 121.3 180 52.2
CARHR192700 Cardamine hirsuta HOM05D007192 ORTHO05D009034 1.2e-25 120.9 166 52.4
FAN21G0227 Fragaria x ananassa HOM05D007192 ORTHO05D009034 1.5e-25 120.6 149 54.4
Sp6g24270 Schrenkiella parvula HOM05D007192 ORTHO05D009034 2.6e-25 119.8 165 55.2
Hund23406 Selenicereus undatus HOM05D007192 ORTHO05D009034 4.5e-25 119.0 193 45.1
BcaB05g22869 Brassica carinata HOM05D007192 ORTHO05D009034 5.8e-25 118.6 166 53.6
unitig_37.g12189 Utricularia gibba HOM05D007192 ORTHO05D009034 5.8e-25 118.6 166 48.8
arahy.Tifrunner.gnm1.ann1.E8J80R Arachis hypogaea HOM05D007192 ORTHO05D009034 7.6e-25 118.2 211 47.9
Manes.09G076800 Manihot esculenta HOM05D007192 ORTHO05D009034 7.6e-25 118.2 172 51.2
AL6G31680 Arabidopsis lyrata HOM05D007192 ORTHO05D009034 9.9e-25 117.9 163 52.8
A03p09840 Brassica napus HOM05D007192 ORTHO05D009034 3.8e-24 115.9 176 52.8
BraA03t10299Z Brassica rapa HOM05D007192 ORTHO05D009034 3.8e-24 115.9 176 52.8
AT5G20130 Arabidopsis thaliana HOM05D007192 ORTHO05D009034 1.1e-23 114.4 166 53.6
Thhalv10014703m.g Eutrema salsugineum HOM05D007192 ORTHO05D009034 1.1e-23 114.4 168 54.8
Actinidia26860 Actinidia chinensis HOM05D007192 ORTHO05D009034 3.2e-23 112.8 136 57.4
C03p11420 Brassica napus HOM05D007192 ORTHO05D009034 3.2e-23 112.8 168 53.6
Lalb_Chr07g0176981 Lupinus albus HOM05D007192 ORTHO05D009034 4.2e-23 112.5 178 43.3
ATR0776G058 Amborella trichopoda HOM05D007192 ORTHO05D009034 5.5e-23 112.1 159 52.8
BcaC03g13735 Brassica carinata HOM05D007192 ORTHO05D009034 9.3e-23 111.3 168 51.8
BolC2t07017H Brassica oleracea HOM05D007192 ORTHO05D009034 9.3e-23 111.3 168 51.8
VMungo1215G1962 Vigna mungo HOM05D007192 ORTHO05D009034 1.2e-22 110.9 225 41.8
Carub.0006s1851 Capsella rubella HOM05D007192 ORTHO05D009034 1.6e-22 110.5 167 52.1
HPP92_000005 Vanilla planifolia HOM05D007192 ORTHO05D009034 2.1e-22 110.2 175 40.6
Psat4g005120 Pisum sativum HOM05D007192 ORTHO05D009034 6.0e-22 108.6 182 45.1
Aa31LG2G11450 Aethionema arabicum HOM05D007192 ORTHO05D009034 1.0e-21 107.8 150 54.0
Duzib192G0317 Durio zibethinus HOM05D007192 ORTHO05D009034 2.3e-21 106.7 146 47.3
Lj2A261T34 Lonicera japonica HOM05D007192 ORTHO05D009034 3.9e-21 105.9 158 53.8
vmacro03641 Vaccinium macrocarpon HOM05D007192 ORTHO05D009034 5.3e-18 95.5 160 37.5
FAN25G1082 Fragaria x ananassa HOM05D007192 ORTHO05D009034 2.5e-15 86.7 92 52.2
Migut.M01397 Erythranthe guttata HOM05D007192 ORTHO05D009034 2.7e-14 83.2 139 54.7
Potri.006G010600 Populus trichocarpa HOM05D007192 ORTHO05D009034 2.7e-14 83.2 93 49.5
SGA_v2.0_scaffold4G01874 Striga asiatica HOM05D007192 ORTHO05D009034 3.3e-12 76.3 120 52.5
BcaB01g04801 Brassica carinata HOM05D007192 ORTHO05D009034 4.3e-12 75.9 175 35.4
EL10Ac8g20192 Beta vulgaris HOM05D007192 ORTHO05D009034 1.3e-11 74.3 93 52.7
BcaB01g04802 Brassica carinata HOM05D007192 ORTHO05D009034 1.8e-10 70.5 94 45.7
BolC3t13616H Brassica oleracea HOM05D007192 ORTHO05D009034 1.8e-10 70.5 94 45.7
SEGI_14587 Sequoiadendron giganteum HOM05D007192 ORTHO05D009034 9.0e-10 68.2 172 38.4
AagrBONN_evm.TU.Sc2ySwM_362.1438 Anthoceros agrestis HOM05D007192 ORTHO05D009034 1.7e-08 63.9 189 34.4
SEGI_15910 Sequoiadendron giganteum HOM05D007192 ORTHO05D009034 5.0e-08 62.4 147 42.2
Mapoly0007s0283 Marchantia polymorpha HOM05D007192 ORTHO05D009034 4.2e-07 59.3 128 46.9
Mapoly0252s0005 Marchantia polymorpha HOM05D007192 ORTHO05D009034 4.2e-07 59.3 128 46.9
Pp3c14_17130 Physcomitrium patens HOM05D007192 ORTHO05D009034 7.2e-07 58.5 177 32.2
COL.COLO4_31887 Corchorus olitorius HOM05D007192 ORTHO05D009034 9.3e-07 58.2 74 47.3


User provided reference genes

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