Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_004822 Daucus carota HOM05D000667 ORTHO05D004096 1.5e-106 389.4 189 100.0
DCAR_017361 Daucus carota HOM05D000667 ORTHO05D004096 5.7e-101 370.9 188 95.7
CSS0050416 Camellia sinensis var. sinensis HOM05D000667 ORTHO05D004096 4.6e-50 201.8 397 35.3
Dinv32241 Davidia involucrata HOM05D000667 ORTHO05D004096 3.0e-49 199.1 403 33.7
CSS0039480 Camellia sinensis var. sinensis HOM05D000667 ORTHO05D004096 8.6e-49 197.6 408 34.3
QL05p057661 Quercus lobata HOM05D000667 ORTHO05D004096 9.5e-48 194.1 401 33.2
Lalb_Chr18g0055381 Lupinus albus HOM05D000667 ORTHO05D004096 3.6e-47 192.2 406 32.8
Peaxi162Scf00307g00074 Petunia axillaris HOM05D000667 ORTHO05D004096 4.7e-47 191.8 406 32.8
Hma1.2p1_0020F.1_g014030 Hydrangea macrophylla HOM05D000667 ORTHO05D004096 1.4e-46 190.3 406 32.3
TWI73G0887 Tripterygium wilfordii HOM05D000667 ORTHO05D004096 6.8e-46 188.0 406 31.8
Rhsim13G0114300 Rhododendron simsii HOM05D000667 ORTHO05D004096 8.9e-46 187.6 406 32.8
RcHm_v2.0_Chr5g0014291 Rosa chinensis HOM05D000667 ORTHO05D004096 5.8e-45 184.9 406 32.8
CANSAT35G0944 Cannabis sativa HOM05D000667 ORTHO05D004096 9.9e-45 184.1 406 32.0
Atru.chr10.1214 Acer truncatum HOM05D000667 ORTHO05D004096 1.7e-44 183.3 406 32.3
Nitab4.5_0004527g0010 Nicotiana tabacum HOM05D000667 ORTHO05D004096 2.2e-44 183.0 406 32.0
Psat1g188160 Pisum sativum HOM05D000667 ORTHO05D004096 2.2e-44 183.0 406 31.3
COL.COLO4_31061 Corchorus olitorius HOM05D000667 ORTHO05D004096 2.9e-44 182.6 406 31.5
Lj2P303T17 Lonicera japonica HOM05D000667 ORTHO05D004096 3.8e-44 182.2 406 32.8
TAR629G0334 Trochodendron aralioides HOM05D000667 ORTHO05D004096 3.8e-44 182.2 406 31.8
Manes.17G071100 Manihot esculenta HOM05D000667 ORTHO05D004096 4.9e-44 181.8 406 31.8
Thecc.06G149500 Theobroma cacao HOM05D000667 ORTHO05D004096 1.1e-43 180.6 406 31.8
Prupe.4G081700 Prunus persica HOM05D000667 ORTHO05D004096 4.2e-43 178.7 406 31.5
PGR042G2716 Punica granatum HOM05D000667 ORTHO05D004096 4.2e-43 178.7 406 30.8
ClCG03G006780 Citrullus lanatus HOM05D000667 ORTHO05D004096 1.2e-42 177.2 406 31.3
MELO3C002742.2 Cucumis melo HOM05D000667 ORTHO05D004096 1.6e-42 176.8 406 31.3
Actinidia16706 Actinidia chinensis HOM05D000667 ORTHO05D004096 2.1e-42 176.4 402 31.6
FvH4_3g05461 Fragaria vesca HOM05D000667 ORTHO05D004096 2.7e-42 176.0 406 32.0
Duzib160G0105 Durio zibethinus HOM05D000667 ORTHO05D004096 3.5e-42 175.6 406 31.0
Gohir.D09G077366 Gossypium hirsutum HOM05D000667 ORTHO05D004096 4.6e-42 175.3 406 30.8
Gohir.D09G077500 Gossypium hirsutum HOM05D000667 ORTHO05D004096 4.6e-42 175.3 406 30.8
Gorai.006G092600 Gossypium raimondii HOM05D000667 ORTHO05D004096 4.6e-42 175.3 406 30.8
Manes.15G122200 Manihot esculenta HOM05D000667 ORTHO05D004096 6.0e-42 174.9 406 30.8
Cc00_g01110 Coffea canephora HOM05D000667 ORTHO05D004096 1.0e-41 174.1 406 31.5
Duzib235G0040 Durio zibethinus HOM05D000667 ORTHO05D004096 1.0e-41 174.1 406 30.5
CsaV3_1G032360 Cucumis sativus L. HOM05D000667 ORTHO05D004096 1.3e-41 173.7 406 31.0
HanXRQChr11g0341261 Helianthus annuus HOM05D000667 ORTHO05D004096 1.7e-41 173.3 406 32.5
TPR.G26252 Trifolium pratense HOM05D000667 ORTHO05D004096 2.3e-41 172.9 387 31.8
CSS0002746 Camellia sinensis var. sinensis HOM05D000667 ORTHO05D004096 3.0e-41 172.6 406 31.3
CSS0004812 Camellia sinensis var. sinensis HOM05D000667 ORTHO05D004096 3.0e-41 172.6 406 31.3
Sed0013854 Sechium edule HOM05D000667 ORTHO05D004096 3.0e-41 172.6 406 30.8
PGSC0003DMG400003174 Solanum tuberosum HOM05D000667 ORTHO05D004096 3.0e-41 172.6 406 31.0
HanXRQChr01g0003361 Helianthus annuus HOM05D000667 ORTHO05D004096 3.9e-41 172.2 406 32.0
arahy.Tifrunner.gnm1.ann1.BT8YZU Arachis hypogaea HOM05D000667 ORTHO05D004096 8.7e-41 171.0 406 31.0
arahy.Tifrunner.gnm1.ann1.MZ7XDG Arachis hypogaea HOM05D000667 ORTHO05D004096 8.7e-41 171.0 406 31.0
Ciclev10015483m.g Citrus clementina HOM05D000667 ORTHO05D004096 8.7e-41 171.0 406 31.0
Oeu034141.1 Olea europaea HOM05D000667 ORTHO05D004096 8.7e-41 171.0 406 31.0
MD05G1283000 Malus domestica HOM05D000667 ORTHO05D004096 1.1e-40 170.6 406 30.3
Sopen02g006160 Solanum pennellii HOM05D000667 ORTHO05D004096 1.9e-40 169.9 406 30.3
MBI02_g36351_MAGBIO Magnolia biondii HOM05D000667 ORTHO05D004096 2.5e-40 169.5 407 30.7
Potri.006G193800 Populus trichocarpa HOM05D000667 ORTHO05D004096 2.5e-40 169.5 406 30.3
VMungo0540G0780 Vigna mungo HOM05D000667 ORTHO05D004096 2.5e-40 169.5 406 30.5
Phvul.006G165500 Phaseolus vulgaris HOM05D000667 ORTHO05D004096 3.3e-40 169.1 406 30.3
Solyc02g021600.1 Solanum lycopersicum HOM05D000667 ORTHO05D004096 3.3e-40 169.1 406 30.3
Nn3g20642 Nelumbo nucifera HOM05D000667 ORTHO05D004096 5.6e-40 168.3 407 31.0
Migut.H01358 Erythranthe guttata HOM05D000667 ORTHO05D004096 7.3e-40 167.9 409 30.1
Gohir.A09G077500 Gossypium hirsutum HOM05D000667 ORTHO05D004096 7.3e-40 167.9 401 29.9
MD10G1261300 Malus domestica HOM05D000667 ORTHO05D004096 7.3e-40 167.9 406 30.5
Medtr2g019230 Medicago truncatula HOM05D000667 ORTHO05D004096 1.2e-39 167.2 406 30.0
Sabra06G0148800 Salix brachista HOM05D000667 ORTHO05D004096 1.6e-39 166.8 406 30.0
AUR62014707 Chenopodium quinoa HOM05D000667 ORTHO05D004096 3.6e-39 165.6 407 30.2
MSTRG.16248 Avicennia marina HOM05D000667 ORTHO05D004096 8.1e-39 164.5 406 30.0
EL10Ac8g20542 Beta vulgaris HOM05D000667 ORTHO05D004096 1.8e-38 163.3 404 29.5
Ah.14g088850 Amaranthus hybridus HOM05D000667 ORTHO05D004096 2.4e-38 162.9 402 29.6
AUR62012488 Chenopodium quinoa HOM05D000667 ORTHO05D004096 2.4e-38 162.9 362 32.3
Sed0011115 Sechium edule HOM05D000667 ORTHO05D004096 3.1e-38 162.5 406 29.8
Sc24g0001650 Simmondsia chinensis HOM05D000667 ORTHO05D004096 3.1e-38 162.5 406 30.3
Glyma.15G093300 Glycine max HOM05D000667 ORTHO05D004096 6.9e-38 161.4 406 30.3
Lj6g0000657 Lotus japonicus HOM05D000667 ORTHO05D004096 9.0e-38 161.0 406 30.5
MSTRG.14777 Avicennia marina HOM05D000667 ORTHO05D004096 5.8e-37 158.3 406 28.3
CAN.G641.46 Capsicum annuum HOM05D000667 ORTHO05D004096 3.8e-36 155.6 407 29.5
Sp1g25950 Schrenkiella parvula HOM05D000667 ORTHO05D004096 8.4e-36 154.5 407 29.2
Hund21282 Selenicereus undatus HOM05D000667 ORTHO05D004096 3.2e-35 152.5 403 29.0
Aqoxy1G01694 Aquilegia oxysepala HOM05D000667 ORTHO05D004096 2.1e-34 149.8 407 27.8
Thhalv10007818m.g Eutrema salsugineum HOM05D000667 ORTHO05D004096 2.1e-34 149.8 407 28.5
Nitab4.5_0000501g0040 Nicotiana tabacum HOM05D000667 ORTHO05D004096 2.1e-34 149.8 386 28.8
Ca_00536_v3 Cicer arietinum L. HOM05D000667 ORTHO05D004096 2.7e-34 149.4 406 28.8
BcaB07g32610 Brassica carinata HOM05D000667 ORTHO05D004096 4.6e-34 148.7 407 29.0
BcaC05g27027 Brassica carinata HOM05D000667 ORTHO05D004096 6.0e-34 148.3 407 28.7
A09p36430 Brassica napus HOM05D000667 ORTHO05D004096 6.0e-34 148.3 407 28.7
C05p28890 Brassica napus HOM05D000667 ORTHO05D004096 6.0e-34 148.3 407 28.7
BolC5t31609H Brassica oleracea HOM05D000667 ORTHO05D004096 6.0e-34 148.3 407 28.7
BraA09t39166Z Brassica rapa HOM05D000667 ORTHO05D004096 6.0e-34 148.3 407 28.7
PSO675G5528 Papaver somniferum HOM05D000667 ORTHO05D004096 7.8e-34 147.9 407 30.0
Lsat_1_v5_gn_1_116980 Lactuca sativa HOM05D000667 ORTHO05D004096 3.0e-33 146.0 406 28.8
CARHR029320 Cardamine hirsuta HOM05D000667 ORTHO05D004096 5.1e-33 145.2 407 28.3
Oeu031276.1 Olea europaea HOM05D000667 ORTHO05D004096 5.1e-33 145.2 406 28.8
Aa31LG6G5580 Aethionema arabicum HOM05D000667 ORTHO05D004096 3.3e-32 142.5 407 28.0
TAR627G1045 Trochodendron aralioides HOM05D000667 ORTHO05D004096 3.3e-32 142.5 103 65.0
CiPaw.09G122700 Carya illinoinensis HOM05D000667 ORTHO05D004096 9.6e-32 141.0 101 62.4
Glyma.13G218800 Glycine max HOM05D000667 ORTHO05D004096 3.6e-31 139.0 103 62.1
THA.LOC104820652 Tarenaya hassleriana HOM05D000667 ORTHO05D004096 4.8e-31 138.7 409 29.3
PSO541G1865 Papaver somniferum HOM05D000667 ORTHO05D004096 1.4e-30 137.1 401 28.7
AT1G30090 Arabidopsis thaliana HOM05D000667 ORTHO05D004096 6.9e-30 134.8 113 65.5
Migut.H01356 Erythranthe guttata HOM05D000667 ORTHO05D004096 1.5e-29 133.7 91 69.2
Oeu006650.1 Olea europaea HOM05D000667 ORTHO05D004096 4.5e-29 132.1 103 62.1
AL1G43990 Arabidopsis lyrata HOM05D000667 ORTHO05D004096 9.9e-29 131.0 113 63.7
Carub.0001s2831 Capsella rubella HOM05D000667 ORTHO05D004096 1.7e-28 130.2 113 62.8
Cpa.g.sc246.7 Carica papaya HOM05D000667 ORTHO05D004096 1.7e-28 130.2 91 68.1
Gohir.A10G041600 Gossypium hirsutum HOM05D000667 ORTHO05D004096 2.2e-28 129.8 98 58.2
Lsat_1_v5_gn_4_29341 Lactuca sativa HOM05D000667 ORTHO05D004096 4.9e-28 128.6 100 62.0
Os07g0153400 Oryza sativa ssp. japonica HOM05D000667 ORTHO05D004096 4.9e-28 128.6 408 26.5
Gorai.011G045000 Gossypium raimondii HOM05D000667 ORTHO05D004096 6.4e-28 128.3 98 56.1
Gohir.D10G042500 Gossypium hirsutum HOM05D000667 ORTHO05D004096 8.4e-28 127.9 98 56.1
ATR1098G029 Amborella trichopoda HOM05D000667 ORTHO05D004096 3.2e-27 125.9 417 27.1
ECA234G3936 Erigeron canadensis HOM05D000667 ORTHO05D004096 3.2e-27 125.9 103 59.2
Zm00001eb300170 Zea mays HOM05D000667 ORTHO05D004096 3.2e-27 125.9 414 27.5
Aqoxy5G03132 Aquilegia oxysepala HOM05D000667 ORTHO05D004096 2.1e-26 123.2 103 51.5
HanXRQChr16g0525601 Helianthus annuus HOM05D000667 ORTHO05D004096 4.6e-26 122.1 104 57.7
Nitab4.5_0002744g0050 Nicotiana tabacum HOM05D000667 ORTHO05D004096 4.6e-26 122.1 104 54.8
unitig_8.g4886 Utricularia gibba HOM05D000667 ORTHO05D004096 3.9e-25 119.0 407 26.3
SGA_v2.0_scaffold106G30656 Striga asiatica HOM05D000667 ORTHO05D004096 5.6e-24 115.2 406 25.6
Aqoxy1G01690 Aquilegia oxysepala HOM05D000667 ORTHO05D004096 9.0e-22 107.8 113 45.1
Nitab4.5_0000869g0010 Nicotiana tabacum HOM05D000667 ORTHO05D004096 1.7e-20 103.6 70 68.6
unitig_578.g16129 Utricularia gibba HOM05D000667 ORTHO05D004096 1.1e-19 100.9 91 54.9
Aqoxy5G03131 Aquilegia oxysepala HOM05D000667 ORTHO05D004096 3.5e-18 95.9 72 68.1
GSVIVG01021505001 Vitis vinifera HOM05D000667 ORTHO05D004096 6.7e-17 91.7 58 70.7
Nitab4.5_0002744g0040 Nicotiana tabacum HOM05D000667 ORTHO05D004096 1.5e-16 90.5 131 36.6
Haze_05613 Corylus avellana HOM05D000667 ORTHO05D004096 1.9e-16 90.1 181 34.8
AagrBONN_evm.TU.Sc2ySwM_369.512 Anthoceros agrestis HOM05D000667 ORTHO05D004096 2.5e-16 89.7 105 44.8
MBI14_g22131_MAGBIO Magnolia biondii HOM05D000667 ORTHO05D004096 5.6e-16 88.6 104 43.3
ATR0580G133 Amborella trichopoda HOM05D000667 ORTHO05D004096 9.6e-16 87.8 103 40.8
TAR625G0547 Trochodendron aralioides HOM05D000667 ORTHO05D004096 2.4e-14 83.2 105 40.0
Potri.018G007100 Populus trichocarpa HOM05D000667 ORTHO05D004096 3.1e-14 82.8 105 41.9
Atru.chr7.2649 Acer truncatum HOM05D000667 ORTHO05D004096 4.0e-14 82.4 104 44.2
Sabra18G0014800 Salix brachista HOM05D000667 ORTHO05D004096 5.3e-14 82.0 106 43.4
SMO174G0059 Selaginella moellendorffii HOM05D000667 ORTHO05D004096 5.3e-14 82.0 101 39.6
CiPaw.07G212200 Carya illinoinensis HOM05D000667 ORTHO05D004096 9.0e-14 81.3 105 39.0
SEGI_00935 Sequoiadendron giganteum HOM05D000667 ORTHO05D004096 9.0e-14 81.3 90 42.2
Duzib187G0973 Durio zibethinus HOM05D000667 ORTHO05D004096 1.2e-13 80.9 105 41.0
Nn2g12659 Nelumbo nucifera HOM05D000667 ORTHO05D004096 1.2e-13 80.9 105 40.0
GSVIVG01035518001 Vitis vinifera HOM05D000667 ORTHO05D004096 1.2e-13 80.9 96 42.7
Manes.15G098200 Manihot esculenta HOM05D000667 ORTHO05D004096 1.5e-13 80.5 105 40.0
Thecc.09G007600 Theobroma cacao HOM05D000667 ORTHO05D004096 2.6e-13 79.7 105 41.0
CiPaw.07G212000 Carya illinoinensis HOM05D000667 ORTHO05D004096 3.4e-13 79.3 105 38.1
Cpa.g.sc23.19 Carica papaya HOM05D000667 ORTHO05D004096 1.7e-12 77.0 105 41.0
Ciclev10008681m.g Citrus clementina HOM05D000667 ORTHO05D004096 3.8e-12 75.9 101 39.6
FAN20G2017 Fragaria x ananassa HOM05D000667 ORTHO05D004096 3.8e-12 75.9 105 39.0
FAN27G0657 Fragaria x ananassa HOM05D000667 ORTHO05D004096 3.8e-12 75.9 105 39.0
Aqoxy7G03123 Aquilegia oxysepala HOM05D000667 ORTHO05D004096 4.9e-12 75.5 105 37.1
Gohir.A05G064100 Gossypium hirsutum HOM05D000667 ORTHO05D004096 6.5e-12 75.1 105 41.0
Cfa013278 Carpinus fangiana HOM05D002778 ORTHO05D003112 8.4e-12 74.7 150 32.0
Haze_21754 Corylus avellana HOM05D000667 ORTHO05D004096 8.4e-12 74.7 99 38.4
COL.COLO4_19029 Corchorus olitorius HOM05D000667 ORTHO05D004096 1.1e-11 74.3 105 38.1
RcHm_v2.0_Chr6g0305031 Rosa chinensis HOM05D000667 ORTHO05D004096 1.1e-11 74.3 105 37.1
FvH4_2g36671 Fragaria vesca HOM05D000667 ORTHO05D004096 1.9e-11 73.6 105 38.1
Actinidia27057 Actinidia chinensis HOM05D000667 ORTHO05D004096 2.5e-11 73.2 44 70.5
TWI34G0704 Tripterygium wilfordii HOM05D000667 ORTHO05D004096 4.2e-11 72.4 105 38.1
PGR044G0476 Punica granatum HOM05D000667 ORTHO05D004096 7.1e-11 71.6 106 40.6
Glyma.06G076900 Glycine max HOM05D000667 ORTHO05D004096 1.2e-10 70.9 101 38.6
CANSAT25G0354 Cannabis sativa HOM05D000667 ORTHO05D004096 2.7e-10 69.7 105 37.1
MD08G1127900 Malus domestica HOM05D000667 ORTHO05D004096 2.7e-10 69.7 105 38.1
Glyma.04G075700 Glycine max HOM05D000667 ORTHO05D004096 4.6e-10 68.9 101 36.6
VMungo1309G0228 Vigna mungo HOM05D000667 ORTHO05D004096 6.1e-10 68.6 103 35.9
Psat0s1809g0080 Pisum sativum HOM05D000667 ORTHO05D004096 1.0e-09 67.8 95 36.8
Zm00001eb389480 Zea mays HOM05D000667 ORTHO05D004096 1.0e-09 67.8 123 36.6
CDE05G0359 Ceratophyllum demersum HOM05D000667 ORTHO05D004096 1.3e-09 67.4 99 35.4
Lj1g0003153 Lotus japonicus HOM05D000667 ORTHO05D004096 3.9e-09 65.9 114 34.2
TWI75G0786 Tripterygium wilfordii HOM05D000667 ORTHO05D004096 6.7e-09 65.1 93 36.6
Os06g0655500 Oryza sativa ssp. japonica HOM05D000667 ORTHO05D004096 1.1e-08 64.3 122 35.2
Prupe.1G459700 Prunus persica HOM05D000667 ORTHO05D004096 3.3e-08 62.8 105 36.2
Zm00001eb389500 Zea mays HOM05D000667 ORTHO05D004096 1.3e-07 60.8 123 35.0
Ca_15665_v3 Cicer arietinum L. HOM05D000667 ORTHO05D004096 1.6e-07 60.5 95 33.7
QL12p025198 Quercus lobata HOM05D000667 ORTHO05D004096 4.8e-07 58.9 104 33.7
MD15G1107400 Malus domestica HOM05D000667 ORTHO05D004096 6.3e-07 58.5 105 33.3
Peaxi162Scf00020g00236 Petunia axillaris HOM05D000667 ORTHO05D009057 6.3e-07 58.5 82 42.7
Eucgr.E00142 Eucalyptus grandis HOM05D000667 ORTHO05D009057 1.8e-06 57.0 122 32.0
Eucgr.E00146 Eucalyptus grandis HOM05D000667 ORTHO05D009057 2.4e-06 56.6 122 31.1
Nitab4.5_0009646g0070 Nicotiana tabacum HOM05D005561 ORTHO05D006834 2.4e-06 56.6 121 27.3
Solyc01g094520.3 Solanum lycopersicum HOM05D000667 ORTHO05D009057 2.4e-06 56.6 82 39.0
GSVIVG01026912001 Vitis vinifera HOM05D000667 ORTHO05D009057 3.1e-06 56.2 127 30.7
Sopen01g038330 Solanum pennellii HOM05D000667 ORTHO05D009057 5.3e-06 55.5 78 39.7
PGSC0003DMG400000165 Solanum tuberosum HOM05D000667 ORTHO05D009057 5.3e-06 55.5 82 39.0
SGA_v2.0_scaffold95G28840 Striga asiatica HOM05D000667 ORTHO05D009057 5.3e-06 55.5 73 42.5
FvH4_7g14191 Fragaria vesca HOM05D000667 ORTHO05D009057 6.9e-06 55.1 71 39.4
MBI01_g14446_MAGBIO Magnolia biondii HOM05D000667 ORTHO05D002614 9.0e-06 54.7 69 39.1


User provided reference genes

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