Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_004805 Daucus carota HOM05D005265 ORTHO05D006326 3.5e-65 251.5 131 100.0
DCAR_004804 Daucus carota HOM05D005265 ORTHO05D006326 2.8e-62 241.9 131 96.2
Migut.M01877 Erythranthe guttata HOM05D005265 ORTHO05D006326 3.5e-57 224.9 131 88.5
Dinv15893 Davidia involucrata HOM05D005265 ORTHO05D006326 3.0e-56 221.9 131 87.0
Dinv32199 Davidia involucrata HOM05D005265 ORTHO05D006326 5.1e-56 221.1 131 87.8
Oeu040090.1 Olea europaea HOM05D005265 ORTHO05D006326 5.1e-56 221.1 131 87.8
BcaB03g12211 Brassica carinata HOM05D005265 ORTHO05D006326 8.6e-56 220.3 131 86.3
AT1G30380 Arabidopsis thaliana HOM05D005265 ORTHO05D006326 1.1e-55 219.9 131 85.5
BcaC01g00188 Brassica carinata HOM05D005265 ORTHO05D006326 1.5e-55 219.5 131 86.3
A08p24490 Brassica napus HOM05D005265 ORTHO05D006326 1.5e-55 219.5 131 86.3
C03p76720 Brassica napus HOM05D005265 ORTHO05D006326 1.5e-55 219.5 131 86.3
BraA08t34405Z Brassica rapa HOM05D005265 ORTHO05D006326 1.5e-55 219.5 131 86.3
CARHR029770 Cardamine hirsuta HOM05D005265 ORTHO05D006326 1.5e-55 219.5 131 85.5
Haze_05746 Corylus avellana HOM05D005265 ORTHO05D006326 4.3e-55 218.0 131 84.7
HanXRQChr04g0113581 Helianthus annuus HOM05D005265 ORTHO05D006326 5.6e-55 217.6 131 85.5
Hma1.2p1_0689F.1_g203690 Hydrangea macrophylla HOM05D005265 ORTHO05D006326 5.6e-55 217.6 131 85.5
Hma1.2p1_1418F.1_g282220 Hydrangea macrophylla HOM05D005265 ORTHO05D006326 5.6e-55 217.6 131 85.5
Nitab4.5_0002991g0030 Nicotiana tabacum HOM05D005265 ORTHO05D006326 7.3e-55 217.2 131 85.5
BraA09t39132Z Brassica rapa HOM05D005265 ORTHO05D006326 9.5e-55 216.9 132 86.4
Sp1g26220 Schrenkiella parvula HOM05D005265 ORTHO05D006326 9.5e-55 216.9 131 84.7
THA.LOC104812683 Tarenaya hassleriana HOM05D005265 ORTHO05D006326 9.5e-55 216.9 131 87.0
Cpa.g.sc17.68 Carica papaya HOM05D005265 ORTHO05D006326 1.6e-54 216.1 131 86.3
ECA236G4370 Erigeron canadensis HOM05D005265 ORTHO05D006326 1.6e-54 216.1 133 85.7
Nitab4.5_0003368g0030 Nicotiana tabacum HOM05D005265 ORTHO05D006326 1.6e-54 216.1 131 84.7
Sopen08g002900 Solanum pennellii HOM05D005265 ORTHO05D006326 1.6e-54 216.1 131 84.0
PGSC0003DMG400020505 Solanum tuberosum HOM05D005265 ORTHO05D006326 1.6e-54 216.1 131 84.7
Nitab4.5_0001809g0020 Nicotiana tabacum HOM05D005265 ORTHO05D006326 2.1e-54 215.7 131 84.0
GSVIVG01021584001 Vitis vinifera HOM05D005265 ORTHO05D006326 2.1e-54 215.7 131 86.3
BcaC05g27071 Brassica carinata HOM05D005265 ORTHO05D006326 2.8e-54 215.3 132 85.6
A09p36080 Brassica napus HOM05D005265 ORTHO05D006326 2.8e-54 215.3 132 85.6
C05p29330 Brassica napus HOM05D005265 ORTHO05D006326 2.8e-54 215.3 132 85.6
BolC5t31665H Brassica oleracea HOM05D005265 ORTHO05D006326 2.8e-54 215.3 132 85.6
THA.LOC104814318 Tarenaya hassleriana HOM05D005265 ORTHO05D006326 2.8e-54 215.3 133 86.5
Nitab4.5_0000100g0280 Nicotiana tabacum HOM05D005265 ORTHO05D006326 3.6e-54 214.9 131 83.2
SalBow8G5437 Salvia bowleyana HOM05D005265 ORTHO05D006326 3.6e-54 214.9 131 85.5
Solyc08g006930.3 Solanum lycopersicum HOM05D005265 ORTHO05D006326 3.6e-54 214.9 131 83.2
HanXRQChr15g0481551 Helianthus annuus HOM05D005265 ORTHO05D006326 4.7e-54 214.5 131 86.3
Peaxi162Scf00045g02242 Petunia axillaris HOM05D005265 ORTHO05D006326 4.7e-54 214.5 132 85.6
AL1G44320 Arabidopsis lyrata HOM05D005265 ORTHO05D006326 6.2e-54 214.2 132 84.8
CAN.G1882.1 Capsicum annuum HOM05D005265 ORTHO05D006326 1.1e-53 213.4 131 82.4
Aa31LG6G5400 Aethionema arabicum HOM05D005265 ORTHO05D006326 1.4e-53 213.0 132 84.1
MSTRG.7528 Avicennia marina HOM05D005265 ORTHO05D006326 1.8e-53 212.6 133 83.5
PGR083G1323 Punica granatum HOM05D005265 ORTHO05D006326 1.8e-53 212.6 131 85.5
Carub.0001s2858 Capsella rubella HOM05D005265 ORTHO05D006326 2.3e-53 212.2 131 85.5
CANSAT35G0137 Cannabis sativa HOM05D005265 ORTHO05D006326 4.0e-53 211.5 131 84.7
Cc09_g08490 Coffea canephora HOM05D005265 ORTHO05D006326 4.0e-53 211.5 131 83.2
Manes.14G134800 Manihot esculenta HOM05D005265 ORTHO05D006326 4.0e-53 211.5 131 83.2
BolC3t19927H Brassica oleracea HOM05D005265 ORTHO05D006326 5.2e-53 211.1 131 84.7
Cfa000859 Carpinus fangiana HOM05D005265 ORTHO05D006326 8.9e-53 210.3 131 81.7
Eucgr.D00234 Eucalyptus grandis HOM05D005265 ORTHO05D006326 8.9e-53 210.3 132 84.1
Glyma.15G194300 Glycine max HOM05D005265 ORTHO05D006326 8.9e-53 210.3 131 84.0
BcaB07g32648 Brassica carinata HOM05D005265 ORTHO05D006326 1.2e-52 209.9 131 83.2
CSS0007721 Camellia sinensis var. sinensis HOM05D005265 ORTHO05D006326 1.2e-52 209.9 132 83.3
CSS0016265 Camellia sinensis var. sinensis HOM05D005265 ORTHO05D006326 1.2e-52 209.9 132 83.3
Thhalv10009090m.g Eutrema salsugineum HOM05D005265 ORTHO05D006326 1.2e-52 209.9 132 83.3
Lj1g0015817 Lotus japonicus HOM05D005265 ORTHO05D006326 1.2e-52 209.9 131 83.2
Sc24g0001600 Simmondsia chinensis HOM05D005265 ORTHO05D006326 2.6e-52 208.8 131 84.0
TAR624G1044 Trochodendron aralioides HOM05D005265 ORTHO05D006326 2.6e-52 208.8 131 84.7
EL10Ac7g15766 Beta vulgaris HOM05D005265 ORTHO05D006326 4.4e-52 208.0 131 84.7
CiPaw.09G117100 Carya illinoinensis HOM05D005265 ORTHO05D006326 4.4e-52 208.0 131 83.2
arahy.Tifrunner.gnm1.ann1.9042LP Arachis hypogaea HOM05D005265 ORTHO05D006326 5.8e-52 207.6 131 81.7
COL.COLO4_17668 Corchorus olitorius HOM05D005265 ORTHO05D006326 7.6e-52 207.2 131 79.4
CiPaw.10G086700 Carya illinoinensis HOM05D005265 ORTHO05D006326 9.9e-52 206.8 131 81.7
arahy.Tifrunner.gnm1.ann1.ZS1M1K Arachis hypogaea HOM05D005265 ORTHO05D006326 1.3e-51 206.5 131 81.7
Phvul.009G216400 Phaseolus vulgaris HOM05D005265 ORTHO05D006326 1.3e-51 206.5 131 82.4
AUR62038135 Chenopodium quinoa HOM05D005265 ORTHO05D006326 1.7e-51 206.1 132 85.6
Phvul.002G140800 Phaseolus vulgaris HOM05D005265 ORTHO05D006326 2.2e-51 205.7 131 83.2
Actinidia13436 Actinidia chinensis HOM05D005265 ORTHO05D006326 2.9e-51 205.3 131 81.7
RcHm_v2.0_Chr5g0015361 Rosa chinensis HOM05D005265 ORTHO05D006326 2.9e-51 205.3 130 84.6
SGA_v2.0_scaffold223G42844 Striga asiatica HOM05D005265 ORTHO05D006326 2.9e-51 205.3 131 83.2
VMungo1309G1099 Vigna mungo HOM05D005265 ORTHO05D006326 2.9e-51 205.3 131 81.7
Duzib132G0868 Durio zibethinus HOM05D005265 ORTHO05D006326 3.7e-51 204.9 131 80.9
Thecc.02G010800 Theobroma cacao HOM05D005265 ORTHO05D006326 3.7e-51 204.9 131 80.9
FAN16G0550 Fragaria x ananassa HOM05D005265 ORTHO05D006326 6.4e-51 204.1 130 83.8
Prupe.4G088200 Prunus persica HOM05D005265 ORTHO05D006326 6.4e-51 204.1 130 82.3
FAN25G1721 Fragaria x ananassa HOM05D005265 ORTHO05D006326 8.4e-51 203.8 132 84.1
Gohir.D02G238400 Gossypium hirsutum HOM05D005265 ORTHO05D006326 8.4e-51 203.8 130 80.8
Gorai.005G266900 Gossypium raimondii HOM05D005265 ORTHO05D006326 8.4e-51 203.8 130 80.8
Manes.06G061100 Manihot esculenta HOM05D005265 ORTHO05D006326 8.4e-51 203.8 130 80.0
PSO541G2745 Papaver somniferum HOM05D005265 ORTHO05D006326 8.4e-51 203.8 131 83.2
PSO675G1042 Papaver somniferum HOM05D005265 ORTHO05D006326 8.4e-51 203.8 131 83.2
CDE01G0641 Ceratophyllum demersum HOM05D005265 ORTHO05D006326 1.1e-50 203.4 130 81.5
Medtr1g026820 Medicago truncatula HOM05D005265 ORTHO05D006326 1.1e-50 203.4 132 81.1
CDE12G0489 Ceratophyllum demersum HOM05D005265 ORTHO05D006326 1.9e-50 202.6 130 80.8
Lalb_Chr08g0233241 Lupinus albus HOM05D005265 ORTHO05D006326 1.9e-50 202.6 131 79.4
Glyma.09G087700 Glycine max HOM05D005265 ORTHO05D006326 2.4e-50 202.2 130 82.3
TAR626G0103 Trochodendron aralioides HOM05D005265 ORTHO05D006326 2.4e-50 202.2 132 83.3
Actinidia33666 Actinidia chinensis HOM05D005265 ORTHO05D006326 3.2e-50 201.8 131 80.2
QL05p054070 Quercus lobata HOM05D005265 ORTHO05D006326 3.2e-50 201.8 131 80.2
Potri.006G254200 Populus trichocarpa HOM05D005265 ORTHO05D006326 4.1e-50 201.4 134 81.3
AUR62009823 Chenopodium quinoa HOM05D005265 ORTHO05D006326 5.4e-50 201.1 132 83.3
FvH4_3g09680 Fragaria vesca HOM05D005265 ORTHO05D006326 5.4e-50 201.1 132 82.6
FAN11G2263 Fragaria x ananassa HOM05D005265 ORTHO05D006326 5.4e-50 201.1 132 82.6
Ca_12734_v3 Cicer arietinum L. HOM05D005265 ORTHO05D006326 7.1e-50 200.7 132 81.1
Ca_12740_v3 Cicer arietinum L. HOM05D005265 ORTHO05D006326 7.1e-50 200.7 132 81.1
ClCG01G025030 Citrullus lanatus HOM05D005265 ORTHO05D006326 7.1e-50 200.7 132 80.3
Gohir.A03G216800 Gossypium hirsutum HOM05D005265 ORTHO05D006326 7.1e-50 200.7 130 80.0
Sabra18G0029900 Salix brachista HOM05D005265 ORTHO05D006326 9.2e-50 200.3 132 81.1
Lsat_1_v5_gn_7_32001 Lactuca sativa HOM05D005265 ORTHO05D006326 1.2e-49 199.9 133 81.2
MD00G1109700 Malus domestica HOM05D005265 ORTHO05D006326 1.2e-49 199.9 130 80.8
TAR626G0742 Trochodendron aralioides HOM05D005265 ORTHO05D006326 1.2e-49 199.9 132 82.6
unitig_61.g26080 Utricularia gibba HOM05D005265 ORTHO05D006326 2.7e-49 198.7 129 79.1
Duzib248G0887 Durio zibethinus HOM05D005265 ORTHO05D006326 3.5e-49 198.4 131 80.9
Atru.chr10.966 Acer truncatum HOM05D005265 ORTHO05D006326 6.0e-49 197.6 131 78.6
MD05G1276100 Malus domestica HOM05D005265 ORTHO05D006326 1.0e-48 196.8 137 79.6
Potri.018G027600 Populus trichocarpa HOM05D005265 ORTHO05D006326 1.0e-48 196.8 132 81.1
Aqoxy4G00026 Aquilegia oxysepala HOM05D005265 ORTHO05D006326 1.3e-48 196.4 130 79.2
Ciclev10017170m.g Citrus clementina HOM05D005265 ORTHO05D006326 3.9e-48 194.9 131 78.6
MBI02_g44634_MAGBIO Magnolia biondii HOM05D005265 ORTHO05D006326 5.1e-48 194.5 130 79.2
Sed0026922 Sechium edule HOM05D005265 ORTHO05D006326 5.1e-48 194.5 133 79.7
TWI09G0405 Tripterygium wilfordii HOM05D005265 ORTHO05D006326 6.6e-48 194.1 132 75.0
MBI02_g40641_MAGBIO Magnolia biondii HOM05D005265 ORTHO05D006326 8.6e-48 193.7 130 79.2
Ah.08g216220 Amaranthus hybridus HOM05D000506 ORTHO05D000369 1.5e-47 193.0 124 81.5
MELO3C007091.2 Cucumis melo HOM05D005265 ORTHO05D006326 1.9e-47 192.6 132 78.8
CsaV3_6G052210 Cucumis sativus L. HOM05D005265 ORTHO05D006326 1.9e-47 192.6 130 78.5
Duzib052G0655 Durio zibethinus HOM05D005265 ORTHO05D006326 1.9e-47 192.6 131 77.1
Sed0012654 Sechium edule HOM05D005265 ORTHO05D006326 3.3e-47 191.8 132 78.8
TWI73G0862 Tripterygium wilfordii HOM05D005265 ORTHO05D006326 4.3e-47 191.4 132 74.2
TPR.G24497 Trifolium pratense HOM05D005265 ORTHO05D006326 5.6e-47 191.0 133 78.9
vmacro03415 Vaccinium macrocarpon HOM05D005265 ORTHO05D006326 5.6e-47 191.0 131 76.3
Psat0s1315g0080 Pisum sativum HOM05D005265 ORTHO05D006326 3.4e-44 181.8 163 65.0
Hund18717 Selenicereus undatus HOM05D005265 ORTHO05D006326 4.4e-44 181.4 138 74.6
ATR0681G400 Amborella trichopoda HOM05D005265 ORTHO05D006326 7.6e-44 180.6 130 73.8
FAN21G2293 Fragaria x ananassa HOM05D005265 ORTHO05D006326 7.6e-44 180.6 104 89.4
HPP92_019500 Vanilla planifolia HOM05D005265 ORTHO05D006326 1.3e-43 179.9 129 73.6
Rhsim13G0119400 Rhododendron simsii HOM05D005265 ORTHO05D006326 3.8e-43 178.3 131 73.3
Lalb_Chr23g0275991 Lupinus albus HOM05D005265 ORTHO05D006326 8.4e-43 177.2 103 86.4
Zm00001eb299990 Zea mays HOM05D005265 ORTHO05D006326 1.1e-42 176.8 130 70.0
Sp4g16930 Schrenkiella parvula HOM05D005265 ORTHO05D006326 4.2e-42 174.9 133 70.7
Os07g0148900 Oryza sativa ssp. japonica HOM05D005265 ORTHO05D006326 5.4e-42 174.5 124 71.8
Pp3c13_10540 Physcomitrium patens HOM05D005265 ORTHO05D006326 5.6e-39 164.5 124 70.2
Pp3c3_10740 Physcomitrium patens HOM05D005265 ORTHO05D006326 8.1e-38 160.6 120 70.0
Mapoly0125s0033 Marchantia polymorpha HOM05D005265 ORTHO05D006326 3.1e-37 158.7 131 68.7
SEGI_05857 Sequoiadendron giganteum HOM05D005265 ORTHO05D006326 4.0e-37 158.3 128 66.4
Nn4g26654 Nelumbo nucifera HOM05D005265 ORTHO05D006326 5.4e-34 147.9 129 68.2
Nn3g20272 Nelumbo nucifera HOM05D005265 ORTHO05D006326 8.7e-32 140.6 112 71.4
Pp3c13_10520 Physcomitrium patens HOM05D005265 ORTHO05D006326 9.6e-31 137.1 130 57.7
AagrBONN_evm.TU.Sc2ySwM_369.184 Anthoceros agrestis HOM05D005265 ORTHO05D006326 4.8e-30 134.8 133 59.4
CBR_g39729 Chara braunii HOM05D005265 ORTHO05D006326 7.9e-25 117.5 127 52.0
SMO358G0410 Selaginella moellendorffii HOM05D005265 ORTHO05D006326 3.7e-22 108.6 78 71.8
Cre17.g724300 Chlamydomonas reinhardtii HOM05D005265 ORTHO05D006326 5.8e-20 101.3 105 54.3
Nn8g40769 Nelumbo nucifera HOM05D005265 ORTHO05D006326 6.0e-17 91.3 68 70.6
RcHm_v2.0_Chr5g0036151 Rosa chinensis HOM05D005265 ORTHO05D006326 5.9e-12 74.7 48 79.2
PRCOL_00005455 Prasinoderma coloniale HOM05D005265 ORTHO05D006326 3.5e-09 65.5 92 41.3
MCO04G068 Micromonas commoda HOM05D005265 ORTHO05D006326 6.7e-08 61.2 78 43.6


User provided reference genes

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