Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_004803 Daucus carota HOM05D019807 ORTHO05D005566 3.3e-59 231.5 117 100.0
DCAR_011229 Daucus carota HOM05D019807 ORTHO05D178471 6.6e-15 84.3 71 64.8
DCAR_028966 Daucus carota HOM05D019807 ORTHO05D177556 1.1e-14 83.6 83 55.4
DCAR_016994 Daucus carota HOM05D019807 ORTHO05D178050 8.9e-12 73.9 56 67.9
DCAR_010230 Daucus carota HOM05D004005 ORTHO05D004876 1.2e-11 73.6 55 72.7
DCAR_005794 Daucus carota HOM05D004754 ORTHO05D005566 7.8e-08 60.8 28 96.4
QL05p054004 Quercus lobata HOM05D004754 ORTHO05D005566 7.8e-08 60.8 34 82.4
TWI53G1117 Tripterygium wilfordii HOM05D004754 ORTHO05D005566 7.8e-08 60.8 34 79.4
Atru.chr10.946 Acer truncatum HOM05D004754 ORTHO05D005566 1.3e-07 60.1 34 82.4
Atru.chr10.952 Acer truncatum HOM05D004754 ORTHO05D005566 1.3e-07 60.1 34 82.4
Cfa020535 Carpinus fangiana HOM05D004754 ORTHO05D005566 1.7e-07 59.7 34 79.4
AUR62001036 Chenopodium quinoa HOM05D004754 ORTHO05D005566 1.7e-07 59.7 34 82.4
TPR.G33233 Trifolium pratense HOM05D004754 ORTHO05D005566 1.7e-07 59.7 34 79.4
TPR.G5080 Trifolium pratense HOM05D004754 ORTHO05D005566 1.7e-07 59.7 34 79.4
Prupe.1G099600 Prunus persica HOM05D004754 ORTHO05D005566 2.3e-07 59.3 34 76.5
Prupe.3G237900 Prunus persica HOM05D004754 ORTHO05D005566 2.3e-07 59.3 34 76.5
QL08p010099 Quercus lobata HOM05D004754 ORTHO05D005566 2.3e-07 59.3 34 79.4
AUR62021582 Chenopodium quinoa HOM05D004754 ORTHO05D005566 3.0e-07 58.9 34 82.4
Duzib248G0043 Durio zibethinus HOM05D004754 ORTHO05D005566 3.0e-07 58.9 34 79.4
Psat0s5166g0080 Pisum sativum HOM05D004754 ORTHO05D005566 3.0e-07 58.9 34 76.5
vmacro03406 Vaccinium macrocarpon HOM05D004754 ORTHO05D005566 3.0e-07 58.9 33 78.8
AUR62004920 Chenopodium quinoa HOM05D004754 ORTHO05D005566 3.9e-07 58.5 34 79.4
Haze_09498 Corylus avellana HOM05D004754 ORTHO05D005566 3.9e-07 58.5 34 79.4
Medtr2g048690 Medicago truncatula HOM05D004754 ORTHO05D005566 3.9e-07 58.5 34 76.5
Ah.02g113940 Amaranthus hybridus HOM05D004754 ORTHO05D005566 6.6e-07 57.8 34 79.4
Cpa.g.sc17.70 Carica papaya HOM05D004754 ORTHO05D005566 6.6e-07 57.8 34 79.4
Ca_02551_v3 Cicer arietinum L. HOM05D004754 ORTHO05D005566 6.6e-07 57.8 34 76.5
Ca_14146_v3 Cicer arietinum L. HOM05D004754 ORTHO05D005566 8.6e-07 57.4 34 76.5
COL.COLO4_17670 Corchorus olitorius HOM05D004754 ORTHO05D005566 8.6e-07 57.4 34 76.5
Lj2g0020778 Lotus japonicus HOM05D004754 ORTHO05D005566 8.6e-07 57.4 34 76.5
Oeu018596.1 Olea europaea HOM05D004754 ORTHO05D005566 8.6e-07 57.4 34 76.5
EL10Ac5g11113 Beta vulgaris HOM05D004754 ORTHO05D005566 1.1e-06 57.0 35 74.3
FvH4_2g14961 Fragaria vesca HOM05D004754 ORTHO05D005566 1.1e-06 57.0 34 73.5
FAN15G1860 Fragaria x ananassa HOM05D004754 ORTHO05D005566 1.1e-06 57.0 34 73.5
FAN24G0458 Fragaria x ananassa HOM05D004754 ORTHO05D005566 1.1e-06 57.0 34 73.5
Lj1P1166T28 Lonicera japonica HOM05D004754 ORTHO05D005566 1.1e-06 57.0 34 73.5
PSO210G1456 Papaver somniferum HOM05D004754 ORTHO05D005566 1.1e-06 57.0 34 76.5
PSO210G6921 Papaver somniferum HOM05D004754 ORTHO05D005566 1.1e-06 57.0 34 76.5
MSTRG.16715 Avicennia marina HOM05D004754 ORTHO05D005566 1.5e-06 56.6 34 73.5
Dinv15895 Davidia involucrata HOM05D004754 ORTHO05D005566 1.5e-06 56.6 34 76.5
Dinv32196 Davidia involucrata HOM05D004754 ORTHO05D005566 1.5e-06 56.6 34 76.5
HanXRQChr12g0360561 Helianthus annuus HOM05D004754 ORTHO05D005566 1.5e-06 56.6 64 46.9
TAR624G1057 Trochodendron aralioides HOM05D004754 ORTHO05D005566 1.5e-06 56.6 34 76.5
ECA240G2987 Erigeron canadensis HOM05D004754 ORTHO05D005566 1.9e-06 56.2 67 43.3
Gohir.A08G179300 Gossypium hirsutum HOM05D004754 ORTHO05D005566 1.9e-06 56.2 34 76.5
Gohir.D08G197900 Gossypium hirsutum HOM05D004754 ORTHO05D005566 1.9e-06 56.2 34 76.5
Gorai.004G208700 Gossypium raimondii HOM05D004754 ORTHO05D005566 1.9e-06 56.2 34 76.5
Psat5g233520 Pisum sativum HOM05D004754 ORTHO05D005566 1.9e-06 56.2 34 76.5
Thecc.02G011000 Theobroma cacao HOM05D004754 ORTHO05D005566 1.9e-06 56.2 34 76.5
Glyma.14G055800 Glycine max HOM05D004754 ORTHO05D005566 2.5e-06 55.8 34 73.5
CSS0007960 Camellia sinensis var. sinensis HOM05D004754 ORTHO05D005566 3.3e-06 55.5 32 78.1
CSS0038452 Camellia sinensis var. sinensis HOM05D004754 ORTHO05D005566 3.3e-06 55.5 32 78.1
Phvul.009G217100 Phaseolus vulgaris HOM05D004754 ORTHO05D005566 3.3e-06 55.5 34 73.5
Rhsim13G0119600 Rhododendron simsii HOM05D004754 ORTHO05D005566 3.3e-06 55.5 32 75.0
AUR62008508 Chenopodium quinoa HOM05D004754 ORTHO05D005566 4.3e-06 55.1 28 89.3
Ciclev10015850m.g Citrus clementina HOM05D004754 ORTHO05D005566 5.6e-06 54.7 34 70.6
Medtr0393s0030 Medicago truncatula HOM05D004754 ORTHO05D005566 5.6e-06 54.7 35 77.1
Medtr3g010310 Medicago truncatula HOM05D004754 ORTHO05D005566 5.6e-06 54.7 35 77.1
Gorai.013G128400 Gossypium raimondii HOM05D004754 ORTHO05D005566 7.3e-06 54.3 34 73.5
Rhsim01G0266600 Rhododendron simsii HOM05D004754 ORTHO05D005566 7.3e-06 54.3 32 71.9
RcHm_v2.0_Chr5g0015381 Rosa chinensis HOM05D004754 ORTHO05D005566 7.3e-06 54.3 34 70.6
SalBow6G1352 Salvia bowleyana HOM05D004754 ORTHO05D005566 7.3e-06 54.3 37 64.9
Eucgr.K03201 Eucalyptus grandis HOM05D004754 ORTHO05D005566 9.5e-06 53.9 35 74.3
Hma1.2p1_1418F.1_g282250 Hydrangea macrophylla HOM05D004754 ORTHO05D005566 9.5e-06 53.9 34 73.5
vmacro08577 Vaccinium macrocarpon HOM05D004754 ORTHO05D005566 9.5e-06 53.9 28 82.1


User provided reference genes

Program Settings