Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_004743 Daucus carota HOM05D003029 ORTHO05D003413 5.5e-300 1033.9 670 100.0
DCAR_012677 Daucus carota HOM05D003029 ORTHO05D003413 7.3e-42 176.4 687 35.5
Dinv14526 Davidia involucrata HOM05D003029 ORTHO05D003413 6.6e-35 153.3 688 33.6
Lj2C1122G5 Lonicera japonica HOM05D003029 ORTHO05D003413 6.0e-28 130.2 452 32.1
TAR636G0249 Trochodendron aralioides HOM05D003029 ORTHO05D003413 5.6e-26 123.6 678 37.0
COL.COLO4_20221 Corchorus olitorius HOM05D003029 ORTHO05D003413 4.9e-22 110.5 215 37.2
Cc01_g16520 Coffea canephora HOM05D003029 ORTHO05D003413 8.4e-22 109.8 682 31.4
GSVIVG01021020001 Vitis vinifera HOM05D003029 ORTHO05D003413 8.4e-22 109.8 151 45.7
CiPaw.14G040000 Carya illinoinensis HOM05D003029 ORTHO05D003413 1.4e-21 109.0 688 30.5
PSO017G1724 Papaver somniferum HOM05D003029 ORTHO05D003413 1.9e-21 108.6 147 44.2
Duzib212G0885 Durio zibethinus HOM05D003029 ORTHO05D003413 2.4e-21 108.2 221 34.8
TAR362G1056 Trochodendron aralioides HOM05D003029 ORTHO05D003413 4.2e-21 107.5 690 30.0
TWI18G0251 Tripterygium wilfordii HOM05D003029 ORTHO05D003413 5.4e-21 107.1 162 41.4
vmacro02792 Vaccinium macrocarpon HOM05D003029 ORTHO05D003413 5.4e-21 107.1 589 25.5
Thecc.04G195700 Theobroma cacao HOM05D003029 ORTHO05D003413 1.6e-20 105.5 148 43.2
Sabra17G0052100 Salix brachista HOM05D003029 ORTHO05D003413 2.1e-20 105.1 213 38.5
Manes.03G144600 Manihot esculenta HOM05D003029 ORTHO05D003413 2.7e-20 104.8 212 36.3
TWI36G0576 Tripterygium wilfordii HOM05D003029 ORTHO05D003413 3.5e-20 104.4 688 27.8
Atru.chr4.1590 Acer truncatum HOM05D003029 ORTHO05D003413 4.6e-20 104.0 118 45.8
Duzib268G0331 Durio zibethinus HOM05D003029 ORTHO05D003413 6.0e-20 103.6 162 42.0
Gorai.006G223500 Gossypium raimondii HOM05D003029 ORTHO05D003413 6.0e-20 103.6 161 38.5
Nn3g20072 Nelumbo nucifera HOM05D003029 ORTHO05D003413 6.0e-20 103.6 208 38.9
Cfa014958 Carpinus fangiana HOM05D003029 ORTHO05D003413 1.3e-19 102.4 164 40.2
PSO063G2363 Papaver somniferum HOM05D003029 ORTHO05D003413 1.3e-19 102.4 157 42.0
Actinidia21255 Actinidia chinensis HOM05D003029 ORTHO05D003413 1.8e-19 102.1 128 45.3
Actinidia35843 Actinidia chinensis HOM05D003029 ORTHO05D003413 2.3e-19 101.7 146 43.8
CiPaw.02G064700 Carya illinoinensis HOM05D003029 ORTHO05D003413 3.0e-19 101.3 191 35.6
Gohir.D09G199800 Gossypium hirsutum HOM05D003029 ORTHO05D003413 3.0e-19 101.3 161 37.9
CSS0049755 Camellia sinensis var. sinensis HOM05D003029 ORTHO05D003413 3.9e-19 100.9 116 49.1
TWI75G0963 Tripterygium wilfordii HOM05D003029 ORTHO05D003413 3.9e-19 100.9 694 28.5
Glyma.05G152400 Glycine max HOM05D003029 ORTHO05D003413 5.1e-19 100.5 216 33.3
Gohir.D10G138100 Gossypium hirsutum HOM05D003029 ORTHO05D003413 1.9e-18 98.6 133 43.6
Gorai.011G153200 Gossypium raimondii HOM05D003029 ORTHO05D003413 1.9e-18 98.6 133 43.6
Actinidia21254 Actinidia chinensis HOM05D003029 ORTHO05D003413 2.5e-18 98.2 116 48.3
Duzib151G1197 Durio zibethinus HOM05D003029 ORTHO05D003413 2.5e-18 98.2 159 39.6
Gohir.A02G019500 Gossypium hirsutum HOM05D003029 ORTHO05D003413 2.5e-18 98.2 159 40.9
Nitab4.5_0006920g0010 Nicotiana tabacum HOM05D003029 ORTHO05D003413 2.5e-18 98.2 117 42.7
Medtr8g081570 Medicago truncatula HOM05D003029 ORTHO05D003413 3.3e-18 97.8 222 34.7
Gohir.D02G022800 Gossypium hirsutum HOM05D003029 ORTHO05D003413 4.3e-18 97.4 159 40.3
Nn3g20075 Nelumbo nucifera HOM05D003029 ORTHO05D003413 4.3e-18 97.4 162 41.4
CiPaw.01G117300 Carya illinoinensis HOM05D003029 ORTHO05D003413 7.4e-18 96.7 728 27.2
Glyma.08G110100 Glycine max HOM05D003029 ORTHO05D003413 7.4e-18 96.7 158 37.3
FAN22G0425 Fragaria x ananassa HOM05D003029 ORTHO05D003413 1.3e-17 95.9 150 38.7
FAN07G2221 Fragaria x ananassa HOM05D003029 ORTHO05D003413 1.6e-17 95.5 162 34.6
Sabra17G0052200 Salix brachista HOM05D003029 ORTHO05D003413 1.6e-17 95.5 137 43.8
Aqoxy2G03937 Aquilegia oxysepala HOM05D003029 ORTHO05D003413 2.1e-17 95.1 117 47.0
Gohir.A10G127900 Gossypium hirsutum HOM05D003029 ORTHO05D003413 2.1e-17 95.1 133 43.6
TAR633G2732 Trochodendron aralioides HOM05D003029 ORTHO05D003413 2.1e-17 95.1 400 35.2
arahy.Tifrunner.gnm1.ann1.R3AU9F Arachis hypogaea HOM05D003029 ORTHO05D003413 2.8e-17 94.7 119 44.5
Prupe.8G196300 Prunus persica HOM05D003029 ORTHO05D003413 3.6e-17 94.4 689 32.7
AUR62018560 Chenopodium quinoa HOM05D003029 ORTHO05D003413 6.2e-17 93.6 115 45.2
Cc03_g08440 Coffea canephora HOM05D003029 ORTHO05D003413 6.2e-17 93.6 118 46.6
Peaxi162Scf00423g00411 Petunia axillaris HOM05D003029 ORTHO05D003413 6.2e-17 93.6 196 33.7
arahy.Tifrunner.gnm1.ann1.AU34HA Arachis hypogaea HOM05D003029 ORTHO05D003413 8.1e-17 93.2 119 43.7
FvH4_4g13340 Fragaria vesca HOM05D003029 ORTHO05D003413 8.1e-17 93.2 150 38.0
FAN12G1114 Fragaria x ananassa HOM05D003029 ORTHO05D003413 8.1e-17 93.2 150 38.0
Nitab4.5_0002260g0050 Nicotiana tabacum HOM05D003029 ORTHO05D003413 8.1e-17 93.2 196 33.2
Sc13g0000380 Simmondsia chinensis HOM05D003029 ORTHO05D003413 8.1e-17 93.2 148 42.6
Psat7g075040 Pisum sativum HOM05D003029 ORTHO05D003413 1.1e-16 92.8 148 38.5
Solyc12g098463.1 Solanum lycopersicum HOM05D003029 ORTHO05D003413 1.1e-16 92.8 107 48.6
TWI36G1114 Tripterygium wilfordii HOM05D003029 ORTHO05D003413 1.1e-16 92.8 677 29.2
Haze_11649 Corylus avellana HOM05D003029 ORTHO05D003413 1.4e-16 92.4 574 24.2
Nitab4.5_0006920g0030 Nicotiana tabacum HOM05D003029 ORTHO05D003413 1.4e-16 92.4 115 43.5
Potri.017G058500 Populus trichocarpa HOM05D003029 ORTHO05D003413 1.4e-16 92.4 211 37.0
Sopen12g033250 Solanum pennellii HOM05D003029 ORTHO05D003413 1.4e-16 92.4 107 48.6
Sabra16G0202400 Salix brachista HOM05D003029 ORTHO05D003413 1.8e-16 92.0 141 43.3
Lalb_Chr07g0186821 Lupinus albus HOM05D003029 ORTHO05D003413 2.4e-16 91.7 208 33.2
Potri.017G058600 Populus trichocarpa HOM05D003029 ORTHO05D003413 2.4e-16 91.7 225 35.6
RcHm_v2.0_Chr4g0413691 Rosa chinensis HOM05D003029 ORTHO05D003413 2.4e-16 91.7 152 36.8
Ca_17981_v3 Cicer arietinum L. HOM05D003029 ORTHO05D003413 3.1e-16 91.3 191 35.6
FAN17G0226 Fragaria x ananassa HOM05D003029 ORTHO05D003413 3.1e-16 91.3 150 38.0
SalBow6G0319 Salvia bowleyana HOM05D003029 ORTHO05D003413 3.1e-16 91.3 683 29.1
SalBow6G1280 Salvia bowleyana HOM05D003029 ORTHO05D003413 3.1e-16 91.3 683 29.1
Rhsim02G0061600 Rhododendron simsii HOM05D003029 ORTHO05D003413 5.3e-16 90.5 116 47.4
AUR62020859 Chenopodium quinoa HOM05D003029 ORTHO05D003413 6.9e-16 90.1 201 33.8
Manes.12G049400 Manihot esculenta HOM05D003029 ORTHO05D003413 6.9e-16 90.1 120 49.2
VMungo0251G3135 Vigna mungo HOM05D003029 ORTHO05D003413 6.9e-16 90.1 206 31.1
CAN.G767.12 Capsicum annuum HOM05D003029 ORTHO05D003413 9.0e-16 89.7 107 46.7
Haze_03354 Corylus avellana HOM05D003029 ORTHO05D003413 9.0e-16 89.7 191 37.7
Hund19006 Selenicereus undatus HOM05D003029 ORTHO05D003413 9.0e-16 89.7 202 35.1
CSS0036198 Camellia sinensis var. sinensis HOM05D003029 ORTHO05D003413 1.2e-15 89.4 113 46.0
Glyma.11G255200 Glycine max HOM05D003029 ORTHO05D003413 1.5e-15 89.0 117 39.3
Rhsim13G0050000 Rhododendron simsii HOM05D003029 ORTHO05D003413 1.5e-15 89.0 594 23.7
TPR.G11807 Trifolium pratense HOM05D003029 ORTHO05D003413 1.5e-15 89.0 221 31.2
Prupe.1G164200 Prunus persica HOM05D003029 ORTHO05D003413 2.0e-15 88.6 164 35.4
GSVIVG01004954001 Vitis vinifera HOM05D003029 ORTHO05D003413 2.0e-15 88.6 156 39.1
EL10Ac3g07458 Beta vulgaris HOM05D003029 ORTHO05D003413 2.6e-15 88.2 193 35.2
Glyma.18G001900 Glycine max HOM05D003029 ORTHO05D003413 2.6e-15 88.2 117 42.7
Nitab4.5_0000676g0030 Nicotiana tabacum HOM05D003029 ORTHO05D003413 3.4e-15 87.8 83 50.6
DCAR_026643 Daucus carota HOM05D003029 ORTHO05D003413 4.5e-15 87.4 158 36.1
Manes.13G051200 Manihot esculenta HOM05D003029 ORTHO05D003413 5.8e-15 87.0 119 46.2
Phvul.003G050800 Phaseolus vulgaris HOM05D003029 ORTHO05D003413 5.8e-15 87.0 157 35.7
Gorai.005G028200 Gossypium raimondii HOM05D003029 ORTHO05D003413 1.3e-14 85.9 156 37.2
Lj4g0000581 Lotus japonicus HOM05D003029 ORTHO05D003413 1.3e-14 85.9 164 34.8
Lalb_Chr23g0278361 Lupinus albus HOM05D003029 ORTHO05D003413 1.7e-14 85.5 158 38.6
Sabra16G0202200 Salix brachista HOM05D003029 ORTHO05D003413 1.7e-14 85.5 156 39.7
VMungo0251G2529 Vigna mungo HOM05D003029 ORTHO05D003413 2.9e-14 84.7 218 32.1
Cpa.g.sc157.52 Carica papaya HOM05D003029 ORTHO05D003413 3.8e-14 84.3 235 31.5
Atru.chr6.1447 Acer truncatum HOM05D003029 ORTHO05D003413 4.9e-14 84.0 694 28.7
Ciclev10005071m.g Citrus clementina HOM05D003029 ORTHO05D003413 4.9e-14 84.0 115 43.5
MD04G1017000 Malus domestica HOM05D003029 ORTHO05D003413 4.9e-14 84.0 185 35.7
Sed0025519 Sechium edule HOM05D003029 ORTHO05D003413 4.9e-14 84.0 148 36.5
Ah.13g077980 Amaranthus hybridus HOM05D003029 ORTHO05D003413 6.4e-14 83.6 120 43.3
PGSC0003DMG400015747 Solanum tuberosum HOM05D003029 ORTHO05D003413 6.4e-14 83.6 75 54.7
MBI07_g27661_MAGBIO Magnolia biondii HOM05D003029 ORTHO05D003413 8.4e-14 83.2 112 44.6
Phvul.003G050700 Phaseolus vulgaris HOM05D003029 ORTHO05D003413 8.4e-14 83.2 203 31.5
SalBow3G0925 Salvia bowleyana HOM05D003029 ORTHO05D003413 8.4e-14 83.2 76 51.3
MSTRG.9800 Avicennia marina HOM05D003029 ORTHO05D003413 2.4e-13 81.6 73 50.7
CAN.G765.36 Capsicum annuum HOM05D003029 ORTHO05D003413 2.4e-13 81.6 76 48.7
Ah.04g149350 Amaranthus hybridus HOM05D003029 ORTHO05D003413 3.2e-13 81.3 226 32.3
TAR365G0314 Trochodendron aralioides HOM05D003029 ORTHO05D003413 3.2e-13 81.3 568 28.9
Actinidia23384 Actinidia chinensis HOM05D003029 ORTHO05D003413 4.2e-13 80.9 681 31.0
CsaV3_2G011760 Cucumis sativus L. HOM05D003029 ORTHO05D003413 5.5e-13 80.5 195 33.3
HanXRQChr11g0344321 Helianthus annuus HOM05D003029 ORTHO05D003413 7.1e-13 80.1 77 51.9
MD13G1282000 Malus domestica HOM05D003029 ORTHO05D003413 7.1e-13 80.1 193 32.1
Sopen05g032240 Solanum pennellii HOM05D003029 ORTHO05D003413 7.1e-13 80.1 75 52.0
MSTRG.4243 Avicennia marina HOM05D003029 ORTHO05D003413 9.3e-13 79.7 191 34.0
CDE05G0723 Ceratophyllum demersum HOM05D003029 ORTHO05D003413 9.3e-13 79.7 84 47.6
Lalb_Chr12g0205611 Lupinus albus HOM05D003029 ORTHO05D003413 1.2e-12 79.3 171 33.9
MD04G1017100 Malus domestica HOM05D003029 ORTHO05D003413 1.6e-12 79.0 193 31.6
ECA248G1735 Erigeron canadensis HOM05D003029 ORTHO05D003413 2.1e-12 78.6 77 48.1
Migut.D02515 Erythranthe guttata HOM05D003029 ORTHO05D003413 2.1e-12 78.6 216 32.4
Migut.G00757 Erythranthe guttata HOM05D003029 ORTHO05D003413 2.1e-12 78.6 200 31.5
Solyc05g053770.4 Solanum lycopersicum HOM05D003029 ORTHO05D003413 2.1e-12 78.6 75 52.0
Nitab4.5_0000850g0180 Nicotiana tabacum HOM05D003029 ORTHO05D003413 3.5e-12 77.8 92 44.6
Oeu043441.1 Olea europaea HOM05D003029 ORTHO05D003413 4.6e-12 77.4 190 30.5
AT5G43490 Arabidopsis thaliana HOM05D003029 ORTHO05D003413 6.0e-12 77.0 154 39.0
ClCG06G007970 Citrullus lanatus HOM05D003029 ORTHO05D003413 7.9e-12 76.6 147 36.7
Eucgr.H00027 Eucalyptus grandis HOM05D003029 ORTHO05D003413 7.9e-12 76.6 166 33.7
Oeu057857.3 Olea europaea HOM05D003029 ORTHO05D003413 7.9e-12 76.6 596 22.7
Sed0005118 Sechium edule HOM05D003029 ORTHO05D003413 7.9e-12 76.6 115 41.7
HanXRQChr01g0022171 Helianthus annuus HOM05D003029 ORTHO05D003413 1.3e-11 75.9 79 48.1
BraA01t04389Z Brassica rapa HOM05D003029 ORTHO05D003413 1.8e-11 75.5 115 40.0
SHI28770 Sapria himalayana HOM05D003029 ORTHO05D003413 1.8e-11 75.5 220 31.8
Carub.0008s0826 Capsella rubella HOM05D003029 ORTHO05D003413 2.3e-11 75.1 173 37.6
BcaB04g21298 Brassica carinata HOM05D003029 ORTHO05D003413 3.9e-11 74.3 412 34.7
MELO3C020427.2 Cucumis melo HOM05D003029 ORTHO05D003413 3.9e-11 74.3 194 32.0
Lsat_1_v5_gn_1_70641 Lactuca sativa HOM05D003029 ORTHO05D003413 5.1e-11 73.9 79 49.4
Sc05g0001900 Simmondsia chinensis HOM05D003029 ORTHO05D003413 5.1e-11 73.9 587 23.7
THA.LOC104822483 Tarenaya hassleriana HOM05D003029 ORTHO05D003413 5.1e-11 73.9 132 35.6
unitig_8.g3407 Utricularia gibba HOM05D003029 ORTHO05D003413 5.1e-11 73.9 77 48.1
A05p40910 Brassica napus HOM05D003029 ORTHO05D003413 6.7e-11 73.6 117 40.2
BNapus_Darmor_BZH_scaffold_109p00150 Brassica napus HOM05D003029 ORTHO05D003413 6.7e-11 73.6 116 37.9
BraA05t22820Z Brassica rapa HOM05D003029 ORTHO05D003413 6.7e-11 73.6 117 40.2
ATR0561G140 Amborella trichopoda HOM05D003029 ORTHO05D003413 8.7e-11 73.2 76 47.4
AL625U10010 Arabidopsis lyrata HOM05D003029 ORTHO05D003413 8.7e-11 73.2 165 36.4
BolC1t05561H Brassica oleracea HOM05D003029 ORTHO05D003413 8.7e-11 73.2 411 32.1
Lj1A90T42 Lonicera japonica HOM05D003029 ORTHO05D003413 8.7e-11 73.2 123 36.6
Lalb_Chr13g0294851 Lupinus albus HOM05D003029 ORTHO05D003413 8.7e-11 73.2 167 33.5
QL06p026140 Quercus lobata HOM05D003029 ORTHO05D003413 8.7e-11 73.2 262 29.8
BcaC05g29857 Brassica carinata HOM05D003029 ORTHO05D003413 1.1e-10 72.8 152 36.8
Thhalv10004154m.g Eutrema salsugineum HOM05D003029 ORTHO05D003413 1.5e-10 72.4 198 32.8
C03p42770 Brassica napus HOM05D003029 ORTHO05D003413 2.5e-10 71.6 118 45.8
BolC3t16546H Brassica oleracea HOM05D003029 ORTHO05D003413 2.5e-10 71.6 118 45.8
CARHR292000 Cardamine hirsuta HOM05D003029 ORTHO05D003413 2.5e-10 71.6 186 33.3
Gohir.A09G206200 Gossypium hirsutum HOM05D003029 ORTHO05D003413 2.5e-10 71.6 125 34.4
AL3G18580 Arabidopsis lyrata HOM05D003029 ORTHO05D003413 3.3e-10 71.2 161 35.4
C05p60010 Brassica napus HOM05D003029 ORTHO05D003413 5.6e-10 70.5 196 31.1
Zm00001eb210840 Zea mays HOM05D003029 ORTHO05D003413 5.6e-10 70.5 142 31.0
ClCG05G003130 Citrullus lanatus HOM05D003029 ORTHO05D003413 1.6e-09 68.9 123 36.6
Oeu049048.2 Olea europaea HOM05D003029 ORTHO05D003413 1.6e-09 68.9 167 29.3
Sp3g06210 Schrenkiella parvula HOM05D003029 ORTHO05D003413 1.6e-09 68.9 418 33.7
BcaC05g29734 Brassica carinata HOM05D003029 ORTHO05D003413 2.1e-09 68.6 152 35.5
CsaV3_3G010750 Cucumis sativus L. HOM05D003029 ORTHO05D003413 3.7e-09 67.8 123 35.0
PGR083G2864 Punica granatum HOM05D003029 ORTHO05D003413 8.2e-09 66.6 126 38.1
HPP92_025250 Vanilla planifolia HOM05D003029 ORTHO05D003413 8.2e-09 66.6 97 37.1
Zm00001eb064410 Zea mays HOM05D003029 ORTHO05D003413 8.2e-09 66.6 145 35.2
MELO3C006294.2 Cucumis melo HOM05D003029 ORTHO05D003413 1.4e-08 65.9 123 35.0
SGA_v2.0_scaffold156G37278 Striga asiatica HOM05D003029 ORTHO05D003413 1.4e-08 65.9 220 27.7
MBI07_g16779_MAGBIO Magnolia biondii HOM05D003029 ORTHO05D003413 1.8e-08 65.5 138 36.2
Sp2g18960 Schrenkiella parvula HOM05D003029 ORTHO05D003413 2.4e-08 65.1 197 31.0
Actinidia11454 Actinidia chinensis HOM05D003029 ORTHO05D003413 3.1e-08 64.7 732 24.7
Hma1.2p1_0349F.1_g132190 Hydrangea macrophylla HOM05D003029 ORTHO05D003413 4.0e-08 64.3 185 29.7
BraA06t26818Z Brassica rapa HOM05D003029 ORTHO05D003413 5.3e-08 63.9 171 32.7
A06p39050 Brassica napus HOM05D003029 ORTHO05D003413 2.6e-07 61.6 117 39.3
Oeu056423.1 Olea europaea HOM05D003029 ORTHO05D003413 2.6e-07 61.6 73 43.8
CANSAT78G1052 Cannabis sativa HOM05D003029 ORTHO05D003413 3.4e-07 61.2 70 47.1
MBI07_g42750_MAGBIO Magnolia biondii HOM05D003029 ORTHO05D003413 4.5e-07 60.8 155 32.9
Sp3g06230 Schrenkiella parvula HOM05D003029 ORTHO05D003413 5.8e-07 60.5 413 34.1
HPP92_006969 Vanilla planifolia HOM05D003029 ORTHO05D003413 5.8e-07 60.5 76 38.2
Solyc12g098467.1 Solanum lycopersicum HOM05D003029 ORTHO05D003413 3.8e-06 57.8 30 76.7
Medtr3g084030 Medicago truncatula HOM05D005635 ORTHO05D006838 4.9e-06 57.4 124 31.5


User provided reference genes

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