Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_004721 Daucus carota HOM05D005052 ORTHO05D006226 4.8e-76 287.7 143 100.0
DCAR_022909 Daucus carota HOM05D005052 ORTHO05D006226 3.5e-26 122.1 113 58.4
Actinidia22954 Actinidia chinensis HOM05D005052 ORTHO05D006226 8.6e-25 117.5 113 55.8
HanXRQChr13g0424561 Helianthus annuus HOM05D005052 ORTHO05D006226 4.3e-24 115.2 113 54.9
PGR102G0465 Punica granatum HOM05D005052 ORTHO05D006226 4.3e-24 115.2 113 54.9
vmacro22193 Vaccinium macrocarpon HOM05D005052 ORTHO05D006226 4.3e-24 115.2 112 55.4
Rhsim08G0032100 Rhododendron simsii HOM05D005052 ORTHO05D006226 5.6e-24 114.8 112 53.6
Ciclev10025711m.g Citrus clementina HOM05D005052 ORTHO05D006226 7.3e-24 114.4 113 54.0
vmacro18426 Vaccinium macrocarpon HOM05D005052 ORTHO05D006226 7.3e-24 114.4 113 54.9
arahy.Tifrunner.gnm1.ann1.1KVD1S Arachis hypogaea HOM05D005052 ORTHO05D006226 1.2e-23 113.6 113 54.0
arahy.Tifrunner.gnm1.ann1.PYN71E Arachis hypogaea HOM05D005052 ORTHO05D006226 1.2e-23 113.6 113 54.0
CiPaw.08G130500 Carya illinoinensis HOM05D005052 ORTHO05D006226 1.2e-23 113.6 113 54.9
ECA240G3065 Erigeron canadensis HOM05D005052 ORTHO05D006226 1.6e-23 113.2 113 54.0
Migut.C00533 Erythranthe guttata HOM05D005052 ORTHO05D006226 1.6e-23 113.2 113 54.0
Nn5g28565 Nelumbo nucifera HOM05D005052 ORTHO05D006226 1.6e-23 113.2 113 54.9
CiPaw.07G061100 Carya illinoinensis HOM05D005052 ORTHO05D006226 2.1e-23 112.8 113 53.1
ClCG10G000590 Citrullus lanatus HOM05D005052 ORTHO05D006226 2.1e-23 112.8 113 54.9
Cc07_g11060 Coffea canephora HOM05D005052 ORTHO05D006226 2.1e-23 112.8 113 54.0
MELO3C013755.2 Cucumis melo HOM05D005052 ORTHO05D006226 2.1e-23 112.8 113 54.9
Dinv40116 Davidia involucrata HOM05D005052 ORTHO05D006226 2.1e-23 112.8 113 54.0
Dinv33661 Davidia involucrata HOM05D005052 ORTHO05D006226 2.8e-23 112.5 113 54.0
Prupe.7G171600 Prunus persica HOM05D005052 ORTHO05D006226 3.6e-23 112.1 113 54.0
Actinidia17421 Actinidia chinensis HOM05D005052 ORTHO05D006226 6.2e-23 111.3 113 52.2
Haze_03731 Corylus avellana HOM05D005052 ORTHO05D006226 6.2e-23 111.3 113 53.1
Eucgr.J02467 Eucalyptus grandis HOM05D005052 ORTHO05D006226 6.2e-23 111.3 113 54.9
Cpa.g.sc6.286 Carica papaya HOM05D005052 ORTHO05D006226 8.0e-23 110.9 113 53.1
FvH4_1g11430 Fragaria vesca HOM05D005052 ORTHO05D006226 8.0e-23 110.9 113 52.2
FAN19G0738 Fragaria x ananassa HOM05D005052 ORTHO05D006226 8.0e-23 110.9 113 52.2
Aqoxy4G02022 Aquilegia oxysepala HOM05D005052 ORTHO05D006226 1.1e-22 110.5 113 53.1
CsaV3_3G000670 Cucumis sativus L. HOM05D005052 ORTHO05D006226 1.1e-22 110.5 113 54.0
FAN23G2381 Fragaria x ananassa HOM05D005052 ORTHO05D006226 1.1e-22 110.5 113 52.2
FAN26G3360 Fragaria x ananassa HOM05D005052 ORTHO05D006226 1.1e-22 110.5 113 52.2
FAN28G0876 Fragaria x ananassa HOM05D005052 ORTHO05D006226 1.1e-22 110.5 113 52.2
Lj4A222T51 Lonicera japonica HOM05D005052 ORTHO05D006226 1.1e-22 110.5 113 53.1
RcHm_v2.0_Chr2g0099021 Rosa chinensis HOM05D005052 ORTHO05D006226 1.4e-22 110.2 113 52.2
Sabra05G0090900 Salix brachista HOM05D005052 ORTHO05D006226 1.4e-22 110.2 112 53.6
Lalb_Chr05g0212261 Lupinus albus HOM05D005052 ORTHO05D006226 1.8e-22 109.8 113 52.2
SalBow3G4284 Salvia bowleyana HOM05D005052 ORTHO05D006226 1.8e-22 109.8 113 52.2
TWI53G1960 Tripterygium wilfordii HOM05D005052 ORTHO05D006226 1.8e-22 109.8 113 52.2
Actinidia28717 Actinidia chinensis HOM05D005052 ORTHO05D006226 3.1e-22 109.0 113 51.3
CARHR281630 Cardamine hirsuta HOM05D005052 ORTHO05D006226 3.1e-22 109.0 113 53.1
Gohir.D12G058900 Gossypium hirsutum HOM05D005052 ORTHO05D006226 3.1e-22 109.0 113 51.3
Gorai.008G062200 Gossypium raimondii HOM05D005052 ORTHO05D006226 3.1e-22 109.0 113 51.3
GSVIVG01018732001 Vitis vinifera HOM05D005052 ORTHO05D006226 3.1e-22 109.0 113 53.1
Glyma.11G078700 Glycine max HOM05D005052 ORTHO05D006226 4.0e-22 108.6 113 52.2
Oeu048477.1 Olea europaea HOM05D005052 ORTHO05D006226 4.0e-22 108.6 113 51.3
TWI09G1579 Tripterygium wilfordii HOM05D005052 ORTHO05D006226 4.0e-22 108.6 113 52.2
VMungo1215G2918 Vigna mungo HOM05D005052 ORTHO05D006226 4.0e-22 108.6 113 52.2
Cfa007001 Carpinus fangiana HOM05D005052 ORTHO05D006226 5.2e-22 108.2 113 52.2
COL.COLO4_22462 Corchorus olitorius HOM05D005052 ORTHO05D006226 6.8e-22 107.8 113 52.2
Duzib147G0491 Durio zibethinus HOM05D005052 ORTHO05D006226 6.8e-22 107.8 113 51.3
Glyma.01G164300 Glycine max HOM05D005052 ORTHO05D006226 6.8e-22 107.8 113 51.3
Gohir.A12G058900 Gossypium hirsutum HOM05D005052 ORTHO05D006226 6.8e-22 107.8 113 51.3
Lalb_Chr09g0321611 Lupinus albus HOM05D005052 ORTHO05D006226 6.8e-22 107.8 113 51.3
Carub.0008s2837 Capsella rubella HOM05D005052 ORTHO05D006226 8.9e-22 107.5 113 52.2
Thhalv10004219m.g Eutrema salsugineum HOM05D005052 ORTHO05D006226 8.9e-22 107.5 113 53.1
MD15G1242600 Malus domestica HOM05D005052 ORTHO05D006226 8.9e-22 107.5 112 51.8
Atru.chr3.855 Acer truncatum HOM05D005052 ORTHO05D006226 1.2e-21 107.1 113 51.3
BcaB04g20124 Brassica carinata HOM05D005052 ORTHO05D006226 1.2e-21 107.1 113 52.2
BcaC04g23113 Brassica carinata HOM05D005052 ORTHO05D006226 1.2e-21 107.1 113 52.2
A09p10150 Brassica napus HOM05D005052 ORTHO05D006226 1.2e-21 107.1 113 52.2
C09p12030 Brassica napus HOM05D005052 ORTHO05D006226 1.2e-21 107.1 113 52.2
BolC9t54093H Brassica oleracea HOM05D005052 ORTHO05D006226 1.2e-21 107.1 113 52.2
BraA09t36659Z Brassica rapa HOM05D005052 ORTHO05D006226 1.2e-21 107.1 113 52.2
Phvul.002G106700 Phaseolus vulgaris HOM05D005052 ORTHO05D006226 1.2e-21 107.1 113 51.3
Sed0003793 Sechium edule HOM05D005052 ORTHO05D006226 1.2e-21 107.1 110 52.7
Hund16503 Selenicereus undatus HOM05D005052 ORTHO05D006226 1.2e-21 107.1 113 52.2
SGA_v2.0_scaffold94G28549 Striga asiatica HOM05D005052 ORTHO05D006226 1.2e-21 107.1 113 51.3
MBI05_g23388_MAGBIO Magnolia biondii HOM05D005052 ORTHO05D006226 1.5e-21 106.7 113 52.2
Medtr5g022580 Medicago truncatula HOM05D005052 ORTHO05D006226 1.5e-21 106.7 113 51.3
Peaxi162Scf00328g00523 Petunia axillaris HOM05D005052 ORTHO05D006226 1.5e-21 106.7 113 52.2
QL06p051082 Quercus lobata HOM05D005052 ORTHO05D006226 1.5e-21 106.7 112 51.8
Psat2g153160 Pisum sativum HOM05D005052 ORTHO05D006226 2.0e-21 106.3 113 51.3
Aa31LG1G14600 Aethionema arabicum HOM05D005052 ORTHO05D006226 2.6e-21 105.9 113 52.2
AL8G45470 Arabidopsis lyrata HOM05D005052 ORTHO05D006226 2.6e-21 105.9 113 51.3
MSTRG.2728 Avicennia marina HOM05D005052 ORTHO05D006226 2.6e-21 105.9 113 49.6
CANSAT25G2560 Cannabis sativa HOM05D005052 ORTHO05D006226 2.6e-21 105.9 113 52.2
Hma1.2p1_2620F.1_g325580 Hydrangea macrophylla HOM05D005052 ORTHO05D006226 2.6e-21 105.9 113 51.3
Nitab4.5_0008943g0020 Nicotiana tabacum HOM05D005052 ORTHO05D006226 2.6e-21 105.9 113 52.2
CAN.G1274.31 Capsicum annuum HOM05D005052 ORTHO05D006226 3.4e-21 105.5 113 52.2
Nitab4.5_0001892g0080 Nicotiana tabacum HOM05D005052 ORTHO05D006226 3.4e-21 105.5 113 52.2
PSO541G6199 Papaver somniferum HOM05D005052 ORTHO05D006226 3.4e-21 105.5 113 52.2
Sp2g30570 Schrenkiella parvula HOM05D005052 ORTHO05D006226 3.4e-21 105.5 113 52.2
THA.LOC104821339 Tarenaya hassleriana HOM05D005052 ORTHO05D006226 3.4e-21 105.5 110 50.9
AT5G66120 Arabidopsis thaliana HOM05D005052 ORTHO05D006226 5.8e-21 104.8 113 51.3
Gohir.D11G180500 Gossypium hirsutum HOM05D005052 ORTHO05D006226 7.5e-21 104.4 113 50.4
Potri.005G110900 Populus trichocarpa HOM05D005052 ORTHO05D006226 7.5e-21 104.4 112 51.8
Solyc02g083590.3 Solanum lycopersicum HOM05D005052 ORTHO05D006226 7.5e-21 104.4 113 52.2
Sopen02g028370 Solanum pennellii HOM05D005052 ORTHO05D006226 7.5e-21 104.4 113 52.2
HPP92_025909 Vanilla planifolia HOM05D005052 ORTHO05D006226 7.5e-21 104.4 112 50.0
Hma1.2p1_0315F.1_g122330 Hydrangea macrophylla HOM05D005052 ORTHO05D006226 1.3e-20 103.6 113 50.4
Lj2g0011110 Lotus japonicus HOM05D005052 ORTHO05D006226 1.3e-20 103.6 113 49.6
Sc03g0003700 Simmondsia chinensis HOM05D005052 ORTHO05D006226 1.3e-20 103.6 111 52.3
Thecc.01G014600 Theobroma cacao HOM05D005052 ORTHO05D006226 1.7e-20 103.2 113 51.3
Ca_24920_v3 Cicer arietinum L. HOM05D005052 ORTHO05D006226 2.2e-20 102.8 113 50.4
SEGI_40904 Sequoiadendron giganteum HOM05D005052 ORTHO05D006226 2.9e-20 102.4 109 50.5
HPP92_025914 Vanilla planifolia HOM05D005052 ORTHO05D006226 2.9e-20 102.4 112 49.1
AUR62003338 Chenopodium quinoa HOM05D005052 ORTHO05D006226 4.9e-20 101.7 113 50.4
Nn1g06262 Nelumbo nucifera HOM05D005052 ORTHO05D006226 4.9e-20 101.7 113 49.6
PSO675G6089 Papaver somniferum HOM05D005052 ORTHO05D006226 4.9e-20 101.7 113 50.4
AUR62029500 Chenopodium quinoa HOM05D005052 ORTHO05D006226 6.4e-20 101.3 113 50.4
PGSC0003DMG400003582 Solanum tuberosum HOM05D005052 ORTHO05D006226 6.4e-20 101.3 113 51.3
TPR.G10542 Trifolium pratense HOM05D005052 ORTHO05D006226 1.1e-19 100.5 109 50.5
TAR381G1626 Trochodendron aralioides HOM05D005052 ORTHO05D006226 1.1e-19 100.5 114 50.9
Gorai.007G192400 Gossypium raimondii HOM05D005052 ORTHO05D006226 1.4e-19 100.1 113 49.6
Zm00001eb103800 Zea mays HOM05D005052 ORTHO05D006226 1.4e-19 100.1 113 48.7
ATR0712G043 Amborella trichopoda HOM05D005052 ORTHO05D006226 1.9e-19 99.8 113 48.7
CDE04G1415 Ceratophyllum demersum HOM05D005052 ORTHO05D006226 3.2e-19 99.0 113 47.8
DCAR_004732 Daucus carota HOM05D005052 ORTHO05D006226 4.1e-19 98.6 95 61.1
unitig_699.g19702 Utricularia gibba HOM05D005052 ORTHO05D006226 4.1e-19 98.6 113 48.7
Os09g0539100 Oryza sativa ssp. japonica HOM05D005052 ORTHO05D006226 4.6e-18 95.1 110 48.2
Pp3c13_24150 Physcomitrium patens HOM05D005052 ORTHO05D006226 1.3e-17 93.6 121 44.6
TPR.G6592 Trifolium pratense HOM05D005052 ORTHO05D006226 1.3e-17 93.6 114 45.6
CSS0012363 Camellia sinensis var. sinensis HOM05D005052 ORTHO05D006226 2.3e-17 92.8 105 49.5
SEGI_17140 Sequoiadendron giganteum HOM05D005052 ORTHO05D006226 1.9e-16 89.7 105 45.7
SEGI_34573 Sequoiadendron giganteum HOM05D005052 ORTHO05D006226 1.9e-16 89.7 105 45.7
CBR_g10969 Chara braunii HOM05D005052 ORTHO05D006226 4.3e-16 88.6 109 45.9
Mapoly0031s0094 Marchantia polymorpha HOM05D005052 ORTHO05D006226 1.2e-15 87.0 121 41.3
SMO228G0049 Selaginella moellendorffii HOM05D005052 ORTHO05D006226 1.8e-14 83.2 109 43.1
AagrBONN_evm.TU.Sc2ySwM_340.387 Anthoceros agrestis HOM05D005052 ORTHO05D006226 1.3e-12 77.0 112 37.5
Gohir.A11G173500 Gossypium hirsutum HOM05D005052 ORTHO05D006226 2.4e-11 72.8 95 44.2
Cre08.g368950 Chlamydomonas reinhardtii HOM05D005052 ORTHO05D006226 1.0e-09 67.4 106 37.7
PRCOL_00000314 Prasinoderma coloniale HOM05D005052 ORTHO05D006226 1.6e-07 60.1 43 58.1
SGA_v2.0_scaffold273G46395 Striga asiatica HOM05D005052 ORTHO05D006226 1.6e-07 60.1 38 68.4
MCO01G625 Micromonas commoda HOM05D005052 ORTHO05D006226 6.2e-07 58.2 112 28.6


User provided reference genes

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