Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_004637 Daucus carota HOM05D001713 ORTHO05D001669 2.1e-57 225.3 101 100.0
DCAR_004641 Daucus carota HOM05D001713 ORTHO05D001669 2.5e-42 175.3 102 82.4
DCAR_022506 Daucus carota HOM05D001713 ORTHO05D001669 3.3e-23 111.7 99 52.5
DCAR_021927 Daucus carota HOM05D001713 ORTHO05D001669 7.4e-23 110.5 99 50.5
DCAR_021926 Daucus carota HOM05D001713 ORTHO05D001669 3.1e-21 105.1 98 49.0
DCAR_031897 Daucus carota HOM05D001713 ORTHO05D001669 4.5e-20 101.3 96 47.9
DCAR_022508 Daucus carota HOM05D001713 ORTHO05D001669 6.5e-19 97.4 96 46.9
TWI34G0085 Tripterygium wilfordii HOM05D001713 ORTHO05D001669 2.0e-15 85.9 94 43.6
QL02p074400 Quercus lobata HOM05D001713 ORTHO05D001669 8.2e-14 80.5 94 42.6
Haze_08832 Corylus avellana HOM05D001713 ORTHO05D001669 3.1e-13 78.6 93 41.9
Hma1.2p1_2547F.1_g324190 Hydrangea macrophylla HOM05D001713 ORTHO05D001669 3.1e-13 78.6 96 44.8
Hma1.2p1_2547F.1_g324191 Hydrangea macrophylla HOM05D001713 ORTHO05D001669 3.1e-13 78.6 96 44.8
Hma1.2p1_2547F.1_g324193 Hydrangea macrophylla HOM05D001713 ORTHO05D001669 3.1e-13 78.6 96 44.8
Haze_09172 Corylus avellana HOM05D001713 ORTHO05D001669 7.0e-13 77.4 93 40.9
Rhsim13G0098200 Rhododendron simsii HOM05D001713 ORTHO05D001669 9.1e-13 77.0 98 41.8
TAR374G0219 Trochodendron aralioides HOM05D001713 ORTHO05D001669 9.1e-13 77.0 94 40.4
Cfa011927 Carpinus fangiana HOM05D001713 ORTHO05D001669 1.2e-12 76.6 93 40.9
TAR374G1468 Trochodendron aralioides HOM05D001713 ORTHO05D001669 1.2e-12 76.6 94 40.4
TAR374G1627 Trochodendron aralioides HOM05D001713 ORTHO05D001669 1.2e-12 76.6 94 40.4
Carub.0004s1534 Capsella rubella HOM05D001713 ORTHO05D001669 1.6e-12 76.3 94 39.4
DCAR_004639 Daucus carota HOM05D001713 ORTHO05D001669 1.6e-12 76.3 39 87.2
AL5G19040 Arabidopsis lyrata HOM05D001713 ORTHO05D001669 2.0e-12 75.9 97 36.1
Glyma.10G103500 Glycine max HOM05D001713 ORTHO05D001669 2.0e-12 75.9 68 48.5
Cfa012186 Carpinus fangiana HOM05D001713 ORTHO05D001669 3.5e-12 75.1 94 39.4
Ciclev10006908m.g Citrus clementina HOM05D001713 ORTHO05D001669 3.5e-12 75.1 96 37.5
Ciclev10006716m.g Citrus clementina HOM05D001713 ORTHO05D001669 4.5e-12 74.7 96 37.5
Ciclev10006773m.g Citrus clementina HOM05D001713 ORTHO05D001669 4.5e-12 74.7 96 36.5
QL02p074932 Quercus lobata HOM05D001713 ORTHO05D001669 5.9e-12 74.3 94 41.5
Lalb_Chr15g0083841 Lupinus albus HOM05D001713 ORTHO05D001669 7.7e-12 73.9 72 45.8
Haze_08778 Corylus avellana HOM05D001713 ORTHO05D001669 1.0e-11 73.6 95 40.0
THA.LOC109116201 Tarenaya hassleriana HOM05D001713 ORTHO05D001669 1.3e-11 73.2 76 48.7
Cpa.g.sc28.53 Carica papaya HOM05D001713 ORTHO05D001669 1.7e-11 72.8 96 39.6
QL02p074910 Quercus lobata HOM05D001713 ORTHO05D001669 2.9e-11 72.0 95 40.0
QL02p075024 Quercus lobata HOM05D001713 ORTHO05D001669 2.9e-11 72.0 95 40.0
Cfa016920 Carpinus fangiana HOM05D001713 ORTHO05D001669 3.8e-11 71.6 93 37.6
QL12p032723 Quercus lobata HOM05D001713 ORTHO05D001669 5.0e-11 71.2 95 37.9
Rhsim07G0090700 Rhododendron simsii HOM05D001713 ORTHO05D001669 5.0e-11 71.2 94 41.5
Lj6g0004027 Lotus japonicus HOM05D001713 ORTHO05D001669 8.5e-11 70.5 78 47.4
PGR031G2861 Punica granatum HOM05D001713 ORTHO05D001669 8.5e-11 70.5 70 42.9
QL02p075052 Quercus lobata HOM05D001713 ORTHO05D001669 8.5e-11 70.5 93 39.8
PGR031G3325 Punica granatum HOM05D001713 ORTHO05D001669 1.1e-10 70.1 68 45.6
Haze_08779 Corylus avellana HOM05D000141 ORTHO05D001860 1.5e-10 69.7 97 39.2
Rhsim07G0090800 Rhododendron simsii HOM05D001713 ORTHO05D001669 1.5e-10 69.7 95 42.1
Gorai.011G050500 Gossypium raimondii HOM05D001713 ORTHO05D001669 1.9e-10 69.3 95 37.9
QL08p058986 Quercus lobata HOM05D001713 ORTHO05D001669 1.9e-10 69.3 94 39.4
Cfa012230 Carpinus fangiana HOM05D001713 ORTHO05D001669 2.5e-10 68.9 94 39.4
Eucgr.E02057 Eucalyptus grandis HOM05D001713 ORTHO05D001669 2.5e-10 68.9 79 43.0
Nn4g26406 Nelumbo nucifera HOM05D001713 ORTHO05D001669 2.5e-10 68.9 94 37.2
Dinv37640 Davidia involucrata HOM05D001713 ORTHO05D001669 4.2e-10 68.2 83 44.6
Gohir.A09G192201 Gossypium hirsutum HOM05D001713 ORTHO05D001669 4.2e-10 68.2 97 36.1
Gohir.D09G186450 Gossypium hirsutum HOM05D001713 ORTHO05D001669 4.2e-10 68.2 97 35.1
Gorai.006G209200 Gossypium raimondii HOM05D001713 ORTHO05D001669 4.2e-10 68.2 97 35.1
Medtr1g045740 Medicago truncatula HOM05D001713 ORTHO05D001669 4.2e-10 68.2 68 48.5
Cfa012233 Carpinus fangiana HOM05D001713 ORTHO05D001669 5.5e-10 67.8 95 38.9
Lj3g0017442 Lotus japonicus HOM05D001713 ORTHO05D001669 5.5e-10 67.8 72 43.1
Lj6g0000820 Lotus japonicus HOM05D001713 ORTHO05D001669 5.5e-10 67.8 70 45.7
TPR.G19803 Trifolium pratense HOM05D001713 ORTHO05D001669 5.5e-10 67.8 71 49.3
Ca_11842_v3 Cicer arietinum L. HOM05D001713 ORTHO05D001669 7.2e-10 67.4 70 47.1
Ca_11853_v3 Cicer arietinum L. HOM05D001713 ORTHO05D001669 7.2e-10 67.4 70 47.1
Ca_18141_v3 Cicer arietinum L. HOM05D001713 ORTHO05D001669 7.2e-10 67.4 72 45.8
Glyma.08G327600 Glycine max HOM05D001713 ORTHO05D001669 7.2e-10 67.4 70 44.3
Glyma.08G327800 Glycine max HOM05D001713 ORTHO05D001669 7.2e-10 67.4 70 44.3
Lalb_Chr15g0085411 Lupinus albus HOM05D001713 ORTHO05D001669 7.2e-10 67.4 74 41.9
QL08p058979 Quercus lobata HOM05D001713 ORTHO05D001669 7.2e-10 67.4 69 47.8
Eucgr.E01937 Eucalyptus grandis HOM05D001713 ORTHO05D001669 9.4e-10 67.0 76 46.1
Medtr1g045720 Medicago truncatula HOM05D001713 ORTHO05D001669 9.4e-10 67.0 66 50.0
Nn4g26398 Nelumbo nucifera HOM05D001713 ORTHO05D001669 9.4e-10 67.0 94 36.2
Cfa010546 Carpinus fangiana HOM05D001713 ORTHO05D001669 1.2e-09 66.6 91 35.2
Cfa010548 Carpinus fangiana HOM05D001713 ORTHO05D001669 1.2e-09 66.6 91 36.3
Haze_08774 Corylus avellana HOM05D001713 ORTHO05D001669 1.6e-09 66.2 91 39.6
Gohir.D10G047401 Gossypium hirsutum HOM05D001713 ORTHO05D001669 1.6e-09 66.2 95 36.8
Lj6g0011540 Lotus japonicus HOM05D001713 ORTHO05D001669 2.1e-09 65.9 69 44.9
Lj6g0022283 Lotus japonicus HOM05D001713 ORTHO05D001669 2.1e-09 65.9 69 44.9
Nn1g01519 Nelumbo nucifera HOM05D001713 ORTHO05D001669 2.1e-09 65.9 79 39.2
QL02p102444 Quercus lobata HOM05D001713 ORTHO05D001669 2.1e-09 65.9 94 36.2
QL02p103065 Quercus lobata HOM05D001713 ORTHO05D001669 2.1e-09 65.9 94 36.2
QL02p103081 Quercus lobata HOM05D001713 ORTHO05D001669 2.1e-09 65.9 94 36.2
Psat5g198800 Pisum sativum HOM05D001713 ORTHO05D001669 2.7e-09 65.5 77 44.2
Psat5g200800 Pisum sativum HOM05D001713 ORTHO05D001669 2.7e-09 65.5 77 42.9
Prupe.5G092200 Prunus persica HOM05D001713 ORTHO05D001669 2.7e-09 65.5 76 39.5
QL02p102432 Quercus lobata HOM05D001713 ORTHO05D001669 2.7e-09 65.5 78 39.7
TAR374G0415 Trochodendron aralioides HOM05D001713 ORTHO05D001669 2.7e-09 65.5 92 39.1
BcaC09g47837 Brassica carinata HOM05D001713 ORTHO05D001669 3.6e-09 65.1 68 44.1
CiPaw.11G135200 Carya illinoinensis HOM05D001713 ORTHO05D001669 3.6e-09 65.1 69 44.9
Eucgr.E02074 Eucalyptus grandis HOM05D001713 ORTHO05D001669 3.6e-09 65.1 69 42.0
Gohir.A10G046150 Gossypium hirsutum HOM05D001713 ORTHO05D001669 3.6e-09 65.1 95 36.8
Rhsim07G0090600 Rhododendron simsii HOM05D001713 ORTHO05D001669 3.6e-09 65.1 93 37.6
Nn4g26403 Nelumbo nucifera HOM05D001713 ORTHO05D001669 4.7e-09 64.7 93 35.5
QL12p032673 Quercus lobata HOM05D001713 ORTHO05D001669 4.7e-09 64.7 95 37.9
Eucgr.E02045 Eucalyptus grandis HOM05D001713 ORTHO05D001669 6.1e-09 64.3 79 41.8
Eucgr.E02054 Eucalyptus grandis HOM05D001713 ORTHO05D001669 6.1e-09 64.3 79 41.8
Thhalv10028286m.g Eutrema salsugineum HOM05D001713 ORTHO05D001669 6.1e-09 64.3 70 45.7
TAR374G0438 Trochodendron aralioides HOM05D001713 ORTHO05D001669 6.1e-09 64.3 94 34.0
Haze_09851 Corylus avellana HOM05D001713 ORTHO05D001669 8.0e-09 63.9 92 34.8
Eucgr.E02046 Eucalyptus grandis HOM05D001713 ORTHO05D001669 8.0e-09 63.9 76 40.8
Eucgr.E02053 Eucalyptus grandis HOM05D001713 ORTHO05D001669 8.0e-09 63.9 76 40.8
CARHR072170 Cardamine hirsuta HOM05D001713 ORTHO05D001669 1.0e-08 63.5 79 39.2
Lj6g0015270 Lotus japonicus HOM05D001713 ORTHO05D001669 1.0e-08 63.5 76 40.8
Sp4g16060 Schrenkiella parvula HOM05D001713 ORTHO05D001669 1.0e-08 63.5 99 36.4
AL4G29400 Arabidopsis lyrata HOM05D001713 ORTHO05D001669 1.4e-08 63.2 80 37.5
BolC1t05688H Brassica oleracea HOM05D001713 ORTHO05D001669 1.4e-08 63.2 66 43.9
BraA01t04478Z Brassica rapa HOM05D001713 ORTHO05D001669 1.4e-08 63.2 81 39.5
Duzib268G1296 Durio zibethinus HOM05D001713 ORTHO05D001669 1.4e-08 63.2 94 36.2
Prupe.5G102400 Prunus persica HOM05D001713 ORTHO05D001669 1.4e-08 63.2 69 42.0
CARHR079970 Cardamine hirsuta HOM05D001713 ORTHO05D001669 1.8e-08 62.8 72 40.3
Haze_09859 Corylus avellana HOM05D003572 ORTHO05D004118 1.8e-08 62.8 91 35.2
Eucgr.E02047 Eucalyptus grandis HOM05D001713 ORTHO05D001669 1.8e-08 62.8 79 41.8
Eucgr.E02050 Eucalyptus grandis HOM05D001713 ORTHO05D001669 1.8e-08 62.8 79 41.8
Eucgr.E02060 Eucalyptus grandis HOM05D001713 ORTHO05D001669 1.8e-08 62.8 79 41.8
Eucgr.L03694 Eucalyptus grandis HOM05D001713 ORTHO05D001669 1.8e-08 62.8 79 41.8
Medtr1g040600 Medicago truncatula HOM05D001713 ORTHO05D001669 1.8e-08 62.8 70 47.1
Nn4g26404 Nelumbo nucifera HOM05D001713 ORTHO05D001669 1.8e-08 62.8 88 36.4
A01p31850 Brassica napus HOM05D001713 ORTHO05D001669 2.3e-08 62.4 68 42.6
BraA01t03310Z Brassica rapa HOM05D001713 ORTHO05D001669 2.3e-08 62.4 68 42.6
Carub.0004s1535 Capsella rubella HOM05D001713 ORTHO05D001669 2.3e-08 62.4 84 36.9
Haze_03476 Corylus avellana HOM05D001713 ORTHO05D001669 2.3e-08 62.4 91 35.2
PSO832G0642 Papaver somniferum HOM05D001713 ORTHO05D001669 2.3e-08 62.4 95 36.8
TPR.G32054 Trifolium pratense HOM05D001713 ORTHO05D001669 2.3e-08 62.4 66 43.9
VMungo0720G1231 Vigna mungo HOM05D001713 ORTHO05D001669 2.3e-08 62.4 70 41.4
Eucgr.E02075 Eucalyptus grandis HOM05D001713 ORTHO05D001669 3.0e-08 62.0 69 42.0
Eucgr.E02048 Eucalyptus grandis HOM05D001713 ORTHO05D001669 4.0e-08 61.6 79 40.5
Psat5g200760 Pisum sativum HOM05D001713 ORTHO05D001669 4.0e-08 61.6 77 41.6
QL02p074390 Quercus lobata HOM05D001713 ORTHO05D001669 4.0e-08 61.6 75 41.3
COL.COLO4_05119 Corchorus olitorius HOM05D001713 ORTHO05D001669 6.7e-08 60.8 95 35.8
DCAR_001694 Daucus carota HOM05D001713 ORTHO05D001669 6.7e-08 60.8 33 84.8
Eucgr.E02029 Eucalyptus grandis HOM05D001713 ORTHO05D001669 6.7e-08 60.8 79 40.5
Eucgr.L01801 Eucalyptus grandis HOM05D001713 ORTHO05D001669 6.7e-08 60.8 79 41.8
Eucgr.E01941 Eucalyptus grandis HOM05D001713 ORTHO05D001669 8.8e-08 60.5 90 36.7
Eucgr.E02114 Eucalyptus grandis HOM05D001713 ORTHO05D001669 8.8e-08 60.5 69 39.1
Eucgr.E04365 Eucalyptus grandis HOM05D001713 ORTHO05D001669 8.8e-08 60.5 79 40.5
Medtr1g046720 Medicago truncatula HOM05D001713 ORTHO05D001669 8.8e-08 60.5 66 42.4
A02p22290 Brassica napus HOM05D001713 ORTHO05D001669 1.1e-07 60.1 72 43.1
Eucgr.L02104 Eucalyptus grandis HOM05D001713 ORTHO05D001669 1.1e-07 60.1 92 34.8
Medtr1g045700 Medicago truncatula HOM05D001713 ORTHO05D001669 1.1e-07 60.1 69 44.9
Eucgr.E01923 Eucalyptus grandis HOM05D001713 ORTHO05D001669 1.5e-07 59.7 79 38.0
FvH4_3g33791 Fragaria vesca HOM05D001713 ORTHO05D001669 1.5e-07 59.7 69 42.0
FAN11G3424 Fragaria x ananassa HOM05D001713 ORTHO05D001669 1.5e-07 59.7 69 42.0
Duzib264G0415 Durio zibethinus HOM05D001713 ORTHO05D001669 2.0e-07 59.3 91 35.2
Duzib264G0660 Durio zibethinus HOM05D001713 ORTHO05D001669 2.0e-07 59.3 94 34.0
Eucgr.E01944 Eucalyptus grandis HOM05D001713 ORTHO05D001669 2.0e-07 59.3 66 43.9
Eucgr.E02044 Eucalyptus grandis HOM05D001713 ORTHO05D001669 2.0e-07 59.3 79 39.2
FvH4_3g37630 Fragaria vesca HOM05D001713 ORTHO05D001669 2.0e-07 59.3 93 32.3
AT2G33720 Arabidopsis thaliana HOM05D001713 ORTHO05D001669 2.6e-07 58.9 77 35.1
Carub.0002s2549 Capsella rubella HOM05D001713 ORTHO05D001669 2.6e-07 58.9 80 38.8
Eucgr.L01802 Eucalyptus grandis HOM05D001713 ORTHO05D001669 2.6e-07 58.9 79 39.2
FAN16G0125 Fragaria x ananassa HOM05D001713 ORTHO05D001669 2.6e-07 58.9 69 40.6
AT1G78635 Arabidopsis thaliana HOM05D001713 ORTHO05D001669 3.3e-07 58.5 98 38.8
BraA02t07234Z Brassica rapa HOM05D001713 ORTHO05D001669 3.3e-07 58.5 72 40.3
Eucgr.E02051 Eucalyptus grandis HOM05D001713 ORTHO05D001669 3.3e-07 58.5 79 38.0
Medtr6g004120 Medicago truncatula HOM05D001713 ORTHO05D001669 3.3e-07 58.5 66 37.9
TPR.G23994 Trifolium pratense HOM05D001713 ORTHO05D001669 3.3e-07 58.5 72 38.9
Eucgr.E01934 Eucalyptus grandis HOM05D001713 ORTHO05D001669 4.4e-07 58.2 66 39.4
Eucgr.E01939 Eucalyptus grandis HOM05D001713 ORTHO05D001669 4.4e-07 58.2 66 39.4
TPR.G23964 Trifolium pratense HOM05D001713 ORTHO05D001669 4.4e-07 58.2 72 37.5
TPR.G34966 Trifolium pratense HOM05D001713 ORTHO05D001669 4.4e-07 58.2 72 41.7
Eucgr.E02134 Eucalyptus grandis HOM05D001713 ORTHO05D001669 5.7e-07 57.8 84 38.1
TPR.G13084 Trifolium pratense HOM05D001713 ORTHO05D001669 5.7e-07 57.8 64 40.6
TPR.G15856 Trifolium pratense HOM05D001713 ORTHO05D001669 5.7e-07 57.8 71 40.8
QL02p074404 Quercus lobata HOM05D001713 ORTHO05D001669 7.5e-07 57.4 72 40.3
TPR.G23998 Trifolium pratense HOM05D001713 ORTHO05D001669 7.5e-07 57.4 69 40.6
BcaB01g03921 Brassica carinata HOM05D001713 ORTHO05D001669 9.7e-07 57.0 74 36.5
Eucgr.E02013 Eucalyptus grandis HOM05D001713 ORTHO05D001669 9.7e-07 57.0 77 36.4
Eucgr.E04373 Eucalyptus grandis HOM05D001713 ORTHO05D001669 9.7e-07 57.0 69 39.1
TPR.G13069 Trifolium pratense HOM05D001713 ORTHO05D001669 9.7e-07 57.0 64 40.6
C02p35710 Brassica napus HOM05D001713 ORTHO05D001669 1.3e-06 56.6 72 38.9
BolC2t09589H Brassica oleracea HOM05D001713 ORTHO05D001669 1.3e-06 56.6 72 38.9
TPR.G25632 Trifolium pratense HOM05D004651 ORTHO05D005761 1.3e-06 56.6 72 41.7
Aqoxy2G01010 Aquilegia oxysepala HOM05D001713 ORTHO05D001669 1.7e-06 56.2 93 34.4
Psat0s4104g0040 Pisum sativum HOM05D001713 ORTHO05D001669 1.7e-06 56.2 78 41.0
Psat6g047560 Pisum sativum HOM05D001713 ORTHO05D001669 1.7e-06 56.2 78 41.0
Eucgr.E04371 Eucalyptus grandis HOM05D001713 ORTHO05D001669 2.2e-06 55.8 66 40.9
Thhalv10022244m.g Eutrema salsugineum HOM05D001713 ORTHO05D001669 2.2e-06 55.8 93 36.6
PSO063G4780 Papaver somniferum HOM05D001713 ORTHO05D001669 2.2e-06 55.8 95 32.6
QL08p029391 Quercus lobata HOM05D001713 ORTHO05D001669 2.2e-06 55.8 80 42.5
TPR.G10611 Trifolium pratense HOM05D001713 ORTHO05D001669 2.2e-06 55.8 72 41.7
TAR374G1505 Trochodendron aralioides HOM05D001713 ORTHO05D001669 2.2e-06 55.8 53 52.8
BraA05t20129Z Brassica rapa HOM05D001713 ORTHO05D001669 2.8e-06 55.5 68 38.2
RcHm_v2.0_Chr5g0082871 Rosa chinensis HOM05D001713 ORTHO05D001669 2.8e-06 55.5 80 38.8
Aqoxy7G00320 Aquilegia oxysepala HOM05D001713 ORTHO05D001669 3.7e-06 55.1 64 39.1
Aqoxy7G00330 Aquilegia oxysepala HOM05D001713 ORTHO05D001669 3.7e-06 55.1 64 39.1
AL2G39050 Arabidopsis lyrata HOM05D001713 ORTHO05D001669 3.7e-06 55.1 94 36.2
CAN.G1427.1 Capsicum annuum HOM05D001713 ORTHO05D001669 6.3e-06 54.3 68 38.2


User provided reference genes

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