Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_004599 Daucus carota HOM05D003010 ORTHO05D003623 1.5e-44 182.6 100 100.0
DCAR_000647 Daucus carota HOM05D003010 ORTHO05D003623 7.1e-10 67.4 96 49.0
Potri.001G080500 Populus trichocarpa HOM05D003010 ORTHO05D003623 2.1e-09 65.9 47 59.6
Sabra01G0057700 Salix brachista HOM05D000255 ORTHO05D000935 3.5e-09 65.1 47 57.4
Cfa013595 Carpinus fangiana HOM05D000255 ORTHO05D000935 8.7e-08 60.5 66 45.5
Cc08_g11590 Coffea canephora HOM05D003010 ORTHO05D003623 1.5e-07 59.7 61 49.2
Ciclev10023073m.g Citrus clementina HOM05D003010 ORTHO05D003623 1.9e-07 59.3 62 48.4
AL8G38370 Arabidopsis lyrata HOM05D003010 ORTHO05D003623 4.3e-07 58.2 49 53.1
AT5G61630 Arabidopsis thaliana HOM05D003010 ORTHO05D003623 4.3e-07 58.2 49 53.1
Medtr1g090200 Medicago truncatula HOM05D003010 ORTHO05D003623 4.3e-07 58.2 96 41.7
GSVIVG01013867001 Vitis vinifera HOM05D003010 ORTHO05D003623 4.3e-07 58.2 62 45.2
CiPaw.07G184100 Carya illinoinensis HOM05D003010 ORTHO05D003623 5.7e-07 57.8 68 44.1
TPR.G13393 Trifolium pratense HOM05D003010 ORTHO05D003623 5.7e-07 57.8 100 39.0
Actinidia31768 Actinidia chinensis HOM05D003010 ORTHO05D003623 7.4e-07 57.4 66 47.0
BcaC06g33261 Brassica carinata HOM05D003010 ORTHO05D003623 7.4e-07 57.4 49 53.1
A03p47240 Brassica napus HOM05D003010 ORTHO05D003623 7.4e-07 57.4 49 53.1
C07p45350 Brassica napus HOM05D003010 ORTHO05D003623 7.4e-07 57.4 49 53.1
BolC7t45056H Brassica oleracea HOM05D003010 ORTHO05D003623 7.4e-07 57.4 49 53.1
BraA03t13851Z Brassica rapa HOM05D003010 ORTHO05D003623 7.4e-07 57.4 49 53.1
Duzib205G1260 Durio zibethinus HOM05D003010 ORTHO05D003623 7.4e-07 57.4 53 47.2
Migut.A01045 Erythranthe guttata HOM05D003010 ORTHO05D003623 7.4e-07 57.4 67 41.8
SalBow3G0012 Salvia bowleyana HOM05D003010 ORTHO05D003623 7.4e-07 57.4 96 43.8
SalBow3G1605 Salvia bowleyana HOM05D003010 ORTHO05D003623 7.4e-07 57.4 96 43.8
Thecc.03G243800 Theobroma cacao HOM05D003010 ORTHO05D003623 7.4e-07 57.4 96 37.5
Atru.chr9.1234 Acer truncatum HOM05D003010 ORTHO05D003623 9.6e-07 57.0 57 45.6
FvH4_7g26830 Fragaria vesca HOM05D003010 ORTHO05D003623 2.1e-06 55.8 52 46.2
FAN03G0814 Fragaria x ananassa HOM05D000255 ORTHO05D003623 2.1e-06 55.8 52 46.2
Potri.003G081900 Populus trichocarpa HOM05D003010 ORTHO05D003623 2.1e-06 55.8 73 45.2
TWI39G0461 Tripterygium wilfordii HOM05D003010 ORTHO05D003623 2.1e-06 55.8 96 36.5
Ah.07g199010 Amaranthus hybridus HOM05D003010 ORTHO05D003623 2.8e-06 55.5 48 50.0
Carub.0004s1739 Capsella rubella HOM05D003010 ORTHO05D003623 2.8e-06 55.5 80 43.8
CDE04G1477 Ceratophyllum demersum HOM05D003010 ORTHO05D003623 2.8e-06 55.5 61 39.3
MELO3C017634.2 Cucumis melo HOM05D003010 ORTHO05D003623 2.8e-06 55.5 96 40.6
Carub.0008s2233 Capsella rubella HOM05D003010 ORTHO05D003623 3.7e-06 55.1 49 51.0
Thhalv10017475m.g Eutrema salsugineum HOM05D003010 ORTHO05D003623 3.7e-06 55.1 96 41.7
Gohir.D09G249800 Gossypium hirsutum HOM05D003010 ORTHO05D003623 3.7e-06 55.1 62 51.6
Gorai.006G274200 Gossypium raimondii HOM05D003010 ORTHO05D003623 3.7e-06 55.1 62 51.6
Actinidia02185 Actinidia chinensis HOM05D003010 ORTHO05D003623 4.8e-06 54.7 62 43.5
CARHR129910 Cardamine hirsuta HOM05D003010 ORTHO05D003623 4.8e-06 54.7 97 40.2
ClCG07G017110 Citrullus lanatus HOM05D003010 ORTHO05D003623 4.8e-06 54.7 103 37.9
Glyma.10G193700 Glycine max HOM05D003010 ORTHO05D003623 4.8e-06 54.7 96 35.4
Nn1g00825 Nelumbo nucifera HOM05D003010 ORTHO05D003623 4.8e-06 54.7 99 37.4
Phvul.002G000700 Phaseolus vulgaris HOM05D003010 ORTHO05D003623 4.8e-06 54.7 56 46.4
TAR629G3508 Trochodendron aralioides HOM05D003010 ORTHO05D003623 4.8e-06 54.7 65 44.6
Ca_10413_v3 Cicer arietinum L. HOM05D003010 ORTHO05D000523 6.2e-06 54.3 96 40.6
Glyma.20G196700 Glycine max HOM05D003010 ORTHO05D003623 6.2e-06 54.3 96 35.4
RcHm_v2.0_Chr1g0373521 Rosa chinensis HOM05D003010 ORTHO05D003623 6.2e-06 54.3 70 42.9
arahy.Tifrunner.gnm1.ann1.I909QJ Arachis hypogaea HOM05D003010 ORTHO05D003623 8.2e-06 53.9 96 34.4
arahy.Tifrunner.gnm1.ann1.Y5VFEC Arachis hypogaea HOM05D003010 ORTHO05D003623 8.2e-06 53.9 96 34.4
BcaC06g33143 Brassica carinata HOM05D003010 ORTHO05D003623 8.2e-06 53.9 49 49.0
Cc02_g04820 Coffea canephora HOM05D003010 ORTHO05D003623 8.2e-06 53.9 96 35.4
Duzib205G1418 Durio zibethinus HOM05D003010 ORTHO05D003623 8.2e-06 53.9 96 40.6
Manes.02G043601 Manihot esculenta HOM05D003010 ORTHO05D003623 8.2e-06 53.9 46 50.0
Prupe.5G059800 Prunus persica HOM05D003010 ORTHO05D003623 8.2e-06 53.9 46 50.0


User provided reference genes

Program Settings