Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_004579 Daucus carota HOM05D000007 ORTHO05D000039 6.3e-75 283.9 129 100.0
AUR62032927 Chenopodium quinoa HOM05D000007 ORTHO05D000039 7.4e-52 207.2 128 72.7
AUR62017742 Chenopodium quinoa HOM05D000007 ORTHO05D000039 1.2e-49 199.9 128 70.3
EL10Ac9g23000 Beta vulgaris HOM05D000007 ORTHO05D000039 1.0e-48 196.8 126 66.7
EL10Ac9g22940 Beta vulgaris HOM05D000007 ORTHO05D000039 3.8e-48 194.9 126 66.7
AUR62031045 Chenopodium quinoa HOM05D000007 ORTHO05D000039 1.2e-44 183.3 129 65.1
AUR62004557 Chenopodium quinoa HOM05D000007 ORTHO05D000039 2.2e-43 179.1 121 66.1
Ah.01g006770 Amaranthus hybridus HOM05D000007 ORTHO05D000039 3.7e-43 178.3 127 63.8
Ah.15g097560 Amaranthus hybridus HOM05D000007 ORTHO05D000039 4.2e-39 164.9 127 57.5
EL10Ac9g22607 Beta vulgaris HOM05D000007 ORTHO05D000039 4.7e-38 161.4 127 55.1
Ah.15g098450 Amaranthus hybridus HOM05D000007 ORTHO05D000039 6.1e-38 161.0 127 55.1
Ah.15g098390 Amaranthus hybridus HOM05D000007 ORTHO05D000039 1.0e-37 160.2 127 55.9
Ah.01g018150 Amaranthus hybridus HOM05D000007 ORTHO05D000039 2.3e-37 159.1 120 58.3
Ah.15g098400 Amaranthus hybridus HOM05D000007 ORTHO05D000039 5.2e-37 157.9 127 55.9
Ah.15g098430 Amaranthus hybridus HOM05D000007 ORTHO05D000039 2.2e-35 152.5 127 53.5
Ah.15g097820 Amaranthus hybridus HOM05D000007 ORTHO05D000039 2.8e-35 152.1 120 55.8
AUR62015056 Chenopodium quinoa HOM05D000007 ORTHO05D000039 4.8e-35 151.4 126 49.2
EL10Ac9g22609 Beta vulgaris HOM05D000007 ORTHO05D000039 6.3e-35 151.0 125 52.0
Ah.15g097940 Amaranthus hybridus HOM05D000007 ORTHO05D000039 2.0e-33 146.0 127 52.0
Hund24904 Selenicereus undatus HOM05D000007 ORTHO05D000039 2.0e-33 146.0 125 48.8
EL10Ac9g22770 Beta vulgaris HOM05D000007 ORTHO05D000039 5.2e-29 131.3 121 45.5
Potri.006G170300 Populus trichocarpa HOM05D000007 ORTHO05D000039 2.4e-26 122.5 121 43.0
Potri.012G099733 Populus trichocarpa HOM05D000007 ORTHO05D000039 1.6e-25 119.8 127 42.5
Potri.005G114900 Populus trichocarpa HOM05D000007 ORTHO05D000039 1.7e-24 116.3 122 44.3
AUR62017513 Chenopodium quinoa HOM05D000007 ORTHO05D000039 1.5e-20 103.2 82 50.0
Potri.017G012200 Populus trichocarpa HOM05D000007 ORTHO05D000039 4.4e-20 101.7 125 40.8
MSTRG.3214 Avicennia marina HOM05D000007 ORTHO05D000039 1.0e-16 90.5 131 37.4
SalBow1G6928 Salvia bowleyana HOM05D000007 ORTHO05D000039 3.9e-16 88.6 129 41.1
Ciclev10026927m.g Citrus clementina HOM05D000007 ORTHO05D000039 4.3e-15 85.1 122 32.0
Dinv06511 Davidia involucrata HOM05D000007 ORTHO05D000039 9.5e-15 84.0 128 36.7
Dinv34982 Davidia involucrata HOM05D000007 ORTHO05D000039 4.7e-14 81.6 125 36.8
Lj8P354T16 Lonicera japonica HOM05D000007 ORTHO05D000039 1.8e-13 79.7 128 35.9
Ciclev10027421m.g Citrus clementina HOM05D000007 ORTHO05D000039 3.1e-13 79.0 119 31.1
Dinv34988 Davidia involucrata HOM05D000007 ORTHO05D000039 4.0e-13 78.6 129 35.7
Lj8C10T4 Lonicera japonica HOM05D000007 ORTHO05D000039 1.5e-12 76.6 128 35.2
Dinv07011 Davidia involucrata HOM05D000007 ORTHO05D000039 2.6e-12 75.9 131 34.4
Lj8C355T6 Lonicera japonica HOM05D000007 ORTHO05D000039 4.4e-12 75.1 128 33.6
Ciclev10027434m.g Citrus clementina HOM05D000007 ORTHO05D000039 5.8e-12 74.7 123 29.3
Dinv34983 Davidia involucrata HOM05D000007 ORTHO05D000039 5.8e-12 74.7 125 35.2
Gorai.011G135900 Gossypium raimondii HOM05D000007 ORTHO05D000039 7.5e-12 74.3 129 29.5
Lj2A996T28 Lonicera japonica HOM05D000007 ORTHO05D000039 7.5e-12 74.3 110 39.1
EL10Ac6g13163 Beta vulgaris HOM05D000007 ORTHO05D000039 2.2e-11 72.8 125 35.2
Lj4P129T109 Lonicera japonica HOM05D000007 ORTHO05D000039 2.2e-11 72.8 135 35.6
Gorai.011G276100 Gossypium raimondii HOM05D000007 ORTHO05D000039 2.9e-11 72.4 127 32.3
Lj7P401T34 Lonicera japonica HOM05D000007 ORTHO05D000039 3.7e-11 72.0 125 31.2
Hund08648 Selenicereus undatus HOM05D000007 ORTHO05D000039 3.7e-11 72.0 74 45.9
Thecc.10G168400 Theobroma cacao HOM05D000007 ORTHO05D000039 4.9e-11 71.6 82 39.0
CAN.G212.10 Capsicum annuum HOM05D000007 ORTHO05D000039 6.4e-11 71.2 100 34.0
Lj8C20T2 Lonicera japonica HOM05D000007 ORTHO05D000039 6.4e-11 71.2 130 33.1
Gohir.D10G241100 Gossypium hirsutum HOM05D000007 ORTHO05D000039 8.3e-11 70.9 127 31.5
Gorai.011G274400 Gossypium raimondii HOM05D000007 ORTHO05D000039 8.3e-11 70.9 130 31.5
Lj7C597G11 Lonicera japonica HOM05D000007 ORTHO05D000039 8.3e-11 70.9 128 29.7
Medtr1g061330 Medicago truncatula HOM05D000007 ORTHO05D000039 8.3e-11 70.9 138 28.3
Gohir.D10G238608 Gossypium hirsutum HOM05D000007 ORTHO05D000039 1.1e-10 70.5 130 31.5
Hma1.2p1_0901F.1_g234670 Hydrangea macrophylla HOM05D000007 ORTHO05D000039 1.9e-10 69.7 117 33.3
Hma1.2p1_0901F.1_g234685 Hydrangea macrophylla HOM05D000007 ORTHO05D000039 1.9e-10 69.7 117 33.3
Hma1.2p1_1150F.1_g261840 Hydrangea macrophylla HOM05D000007 ORTHO05D000039 1.9e-10 69.7 117 33.3
Lj8P355T18 Lonicera japonica HOM05D000007 ORTHO05D000039 2.4e-10 69.3 106 34.9
Dinv11523 Davidia involucrata HOM05D000007 ORTHO05D000039 3.2e-10 68.9 113 35.4
Nitab4.5_0000544g0010 Nicotiana tabacum HOM05D000007 ORTHO05D000039 4.1e-10 68.6 132 33.3
Actinidia10577 Actinidia chinensis HOM05D000007 ORTHO05D000039 5.4e-10 68.2 101 37.6
Dinv33763 Davidia involucrata HOM05D000001 ORTHO05D000003 5.4e-10 68.2 124 33.1
Cfa007560 Carpinus fangiana HOM05D000007 ORTHO05D000039 1.2e-09 67.0 124 32.3
RcHm_v2.0_Chr2g0096811 Rosa chinensis HOM05D000007 ORTHO05D000039 1.6e-09 66.6 134 29.9
Dinv07009 Davidia involucrata HOM05D000007 ORTHO05D000039 2.0e-09 66.2 113 33.6
QL02p078646 Quercus lobata HOM05D000007 ORTHO05D000039 2.0e-09 66.2 140 35.0
Thecc.10G167700 Theobroma cacao HOM05D021587 ORTHO05D000039 3.5e-09 65.5 81 37.0
Dinv06198 Davidia involucrata HOM05D000007 ORTHO05D000039 4.6e-09 65.1 85 37.6
Lj1g0009229 Lotus japonicus HOM05D000007 ORTHO05D000039 4.6e-09 65.1 103 34.0
RcHm_v2.0_Chr3g0456291 Rosa chinensis HOM05D000007 ORTHO05D000039 6.0e-09 64.7 126 29.4
QL03p023798 Quercus lobata HOM05D000007 ORTHO05D000039 7.8e-09 64.3 130 27.7
QL03p023874 Quercus lobata HOM05D000007 ORTHO05D000039 7.8e-09 64.3 130 27.7
COL.COLO4_22623 Corchorus olitorius HOM05D000007 ORTHO05D000039 1.0e-08 63.9 89 30.3
Dinv05293 Davidia involucrata HOM05D000007 ORTHO05D000039 1.0e-08 63.9 129 33.3
FvH4_6g06831 Fragaria vesca HOM05D000007 ORTHO05D000039 1.3e-08 63.5 135 26.7
Prupe.6G320600 Prunus persica HOM05D000007 ORTHO05D000039 1.3e-08 63.5 131 32.1
TWI34G1066 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 1.7e-08 63.2 98 31.6
Gohir.A12G083765 Gossypium hirsutum HOM05D000007 ORTHO05D000039 3.0e-08 62.4 129 27.9
Prupe.6G318300 Prunus persica HOM05D000007 ORTHO05D000039 3.0e-08 62.4 134 32.8
CSS0003262 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D000039 3.9e-08 62.0 86 33.7
Lju41C15T0 Lonicera japonica HOM05D000007 ORTHO05D000039 3.9e-08 62.0 106 34.9
Cfa000448 Carpinus fangiana HOM05D000007 ORTHO05D000039 5.0e-08 61.6 84 34.5
DCAR_007412 Daucus carota HOM05D000007 ORTHO05D000039 5.0e-08 61.6 130 27.7
Gohir.D12G088200 Gossypium hirsutum HOM05D000007 ORTHO05D000039 5.0e-08 61.6 129 27.9
Gorai.008G098100 Gossypium raimondii HOM05D000007 ORTHO05D000039 5.0e-08 61.6 129 27.9
SGA_v2.0_scaffold135G34779 Striga asiatica HOM05D000007 ORTHO05D000039 5.0e-08 61.6 124 33.9
Thecc.10G168500 Theobroma cacao HOM05D000007 ORTHO05D000039 6.6e-08 61.2 102 31.4
TWI60G0843 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 6.6e-08 61.2 129 28.7
MD17G1230300 Malus domestica HOM05D000007 ORTHO05D000039 8.6e-08 60.8 126 28.6
Medtr0129s0070 Medicago truncatula HOM05D000007 ORTHO05D000039 8.6e-08 60.8 120 30.0
Peaxi162Scf01162g00011 Petunia axillaris HOM05D000007 ORTHO05D000039 8.6e-08 60.8 138 29.7
Peaxi162Scf00070g00071 Petunia axillaris HOM05D000007 ORTHO05D000039 1.1e-07 60.5 111 32.4
Psat2g002560 Pisum sativum HOM05D000007 ORTHO05D000039 1.1e-07 60.5 108 26.9
Dinv06537 Davidia involucrata HOM05D000007 ORTHO05D000039 1.5e-07 60.1 98 33.7
Thecc.04G089800 Theobroma cacao HOM05D000007 ORTHO05D000039 1.5e-07 60.1 129 28.7
Cfa000425 Carpinus fangiana HOM05D000007 ORTHO05D000039 1.9e-07 59.7 87 33.3
CiPaw.04G017800 Carya illinoinensis HOM05D000007 ORTHO05D000039 1.9e-07 59.7 130 28.5
Nitab4.5_0000275g0060 Nicotiana tabacum HOM05D000007 ORTHO05D000039 1.9e-07 59.7 77 37.7
Peaxi162Scf00172g00071 Petunia axillaris HOM05D000007 ORTHO05D000039 1.9e-07 59.7 132 27.3
Psat3g173680 Pisum sativum HOM05D000007 ORTHO05D000039 1.9e-07 59.7 141 27.7
Cfa000444 Carpinus fangiana HOM05D000007 ORTHO05D000039 3.3e-07 58.9 84 35.7
Dinv07686 Davidia involucrata HOM05D000007 ORTHO05D000039 3.3e-07 58.9 82 34.1
CiPaw.14G019500 Carya illinoinensis HOM05D000007 ORTHO05D000039 4.3e-07 58.5 119 27.7
Lju41C15G6 Lonicera japonica HOM05D000007 ORTHO05D000039 4.3e-07 58.5 105 33.3
Cfa000428 Carpinus fangiana HOM05D000007 ORTHO05D000039 5.6e-07 58.2 86 32.6
Migut.M00313 Erythranthe guttata HOM05D000007 ORTHO05D000039 7.3e-07 57.8 126 27.8
Medtr0064s0160 Medicago truncatula HOM05D000007 ORTHO05D000039 7.3e-07 57.8 132 26.5
Atru.chr5.2396 Acer truncatum HOM05D000007 ORTHO05D000039 9.5e-07 57.4 112 29.5
CsaV3_3G036330 Cucumis sativus L. HOM05D000007 ORTHO05D000039 9.5e-07 57.4 113 27.4
Medtr0129s0120 Medicago truncatula HOM05D000007 ORTHO05D000039 9.5e-07 57.4 121 27.3
Peaxi162Scf00326g00061 Petunia axillaris HOM05D000007 ORTHO05D000039 9.5e-07 57.4 129 29.5
QL08p013898 Quercus lobata HOM05D000007 ORTHO05D000039 9.5e-07 57.4 134 29.1
RcHm_v2.0_Chr6g0262491 Rosa chinensis HOM05D000007 ORTHO05D000039 9.5e-07 57.4 139 25.9
TWI53G1032 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 1.2e-06 57.0 129 25.6
Cfa000454 Carpinus fangiana HOM05D000007 ORTHO05D000039 2.1e-06 56.2 87 34.5
Dinv24586 Davidia involucrata HOM05D000007 ORTHO05D000039 2.1e-06 56.2 85 32.9
MD15G1153400 Malus domestica HOM05D000007 ORTHO05D000039 2.1e-06 56.2 135 30.4
Peaxi162Scf01590g00001 Petunia axillaris HOM05D000007 ORTHO05D000039 2.1e-06 56.2 84 35.7
Peaxi162Scf75437g00003 Petunia axillaris HOM05D000007 ORTHO05D000039 2.1e-06 56.2 84 35.7
QL03p020720 Quercus lobata HOM05D000007 ORTHO05D000039 2.1e-06 56.2 89 36.0
QL03p020743 Quercus lobata HOM05D000007 ORTHO05D000039 2.1e-06 56.2 89 36.0
QL03p020817 Quercus lobata HOM05D000007 ORTHO05D000039 2.1e-06 56.2 89 36.0
QL03p021893 Quercus lobata HOM05D000007 ORTHO05D000039 2.1e-06 56.2 89 36.0
QL03p021906 Quercus lobata HOM05D000007 ORTHO05D000039 2.1e-06 56.2 89 36.0
CAN.G281.1 Capsicum annuum HOM05D000007 ORTHO05D000039 2.8e-06 55.8 91 34.1
Dinv01035 Davidia involucrata HOM05D000007 ORTHO05D000039 2.8e-06 55.8 88 34.1
Duzib187G1873 Durio zibethinus HOM05D000007 ORTHO05D000039 2.8e-06 55.8 138 26.1
Lj1g0005691 Lotus japonicus HOM05D000007 ORTHO05D000039 2.8e-06 55.8 104 27.9
RcHm_v2.0_Chr3g0456091 Rosa chinensis HOM05D000007 ORTHO05D000039 2.8e-06 55.8 113 28.3
RcHm_v2.0_Chr3g0456241 Rosa chinensis HOM05D000007 ORTHO05D000039 2.8e-06 55.8 131 29.0
CAN.G577.15 Capsicum annuum HOM05D000007 ORTHO05D000039 3.6e-06 55.5 123 29.3
Cfa006665 Carpinus fangiana HOM05D000007 ORTHO05D000039 3.6e-06 55.5 84 33.3
Cfa017236 Carpinus fangiana HOM05D000007 ORTHO05D000039 3.6e-06 55.5 130 27.7
CsaV3_3G036310 Cucumis sativus L. HOM05D000007 ORTHO05D000039 3.6e-06 55.5 115 27.0
Medtr6g079770 Medicago truncatula HOM05D000007 ORTHO05D000039 3.6e-06 55.5 101 28.7
QL04p026044 Quercus lobata HOM05D000007 ORTHO05D000039 3.6e-06 55.5 110 30.9
Migut.M00307 Erythranthe guttata HOM05D000007 ORTHO05D000039 4.7e-06 55.1 123 26.0
Peaxi162Scf00426g00011 Petunia axillaris HOM05D000007 ORTHO05D000039 4.7e-06 55.1 88 34.1
QL07p003496 Quercus lobata HOM05D000007 ORTHO05D000039 6.2e-06 54.7 124 29.8
PGR042G0166 Punica granatum HOM05D000007 ORTHO05D000039 8.1e-06 54.3 127 26.0


User provided reference genes

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