Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_004448 Daucus carota HOM05D004267 ORTHO05D005267 1.1e-121 439.9 210 100.0
DCAR_004449 Daucus carota HOM05D004267 ORTHO05D005267 6.0e-67 258.1 204 65.2
DCAR_000778 Daucus carota HOM05D004267 ORTHO05D005267 9.6e-49 197.6 164 56.7
CSS0026627 Camellia sinensis var. sinensis HOM05D004267 ORTHO05D005267 1.1e-47 194.1 166 52.4
CSS0030161 Camellia sinensis var. sinensis HOM05D004267 ORTHO05D000002 1.1e-47 194.1 166 52.4
MSTRG.1674 Avicennia marina HOM05D004267 ORTHO05D005267 1.8e-47 193.4 165 53.3
Hma1.2p1_1213F.1_g267510 Hydrangea macrophylla HOM05D004267 ORTHO05D005267 2.4e-47 193.0 166 53.0
GSVIVG01035339001 Vitis vinifera HOM05D004267 ORTHO05D005267 4.0e-47 192.2 165 54.5
Actinidia14699 Actinidia chinensis HOM05D004267 ORTHO05D005267 9.0e-47 191.0 165 54.5
Glyma.17G231200 Glycine max HOM05D004267 ORTHO05D005267 2.0e-46 189.9 165 52.1
Oeu036354.1 Olea europaea HOM05D004267 ORTHO05D005267 2.6e-46 189.5 165 52.7
QL02p001694 Quercus lobata HOM05D004267 ORTHO05D005267 3.4e-46 189.1 166 53.6
Actinidia18200 Actinidia chinensis HOM05D004267 ORTHO05D005267 4.5e-46 188.7 165 53.3
Phvul.001G033101 Phaseolus vulgaris HOM05D004267 ORTHO05D005267 5.8e-46 188.3 165 52.1
TWI34G0953 Tripterygium wilfordii HOM05D004267 ORTHO05D005267 5.8e-46 188.3 166 51.2
Glyma.14G092300 Glycine max HOM05D004267 ORTHO05D005267 2.2e-45 186.4 165 51.5
VMungo0647G2384 Vigna mungo HOM05D004267 ORTHO05D005267 2.2e-45 186.4 165 50.9
Rhsim07G0144100 Rhododendron simsii HOM05D004267 ORTHO05D005267 4.9e-45 185.3 164 51.8
Haze_18224 Corylus avellana HOM05D004267 ORTHO05D005267 6.4e-45 184.9 166 51.2
Sed0007787 Sechium edule HOM05D004267 ORTHO05D005267 8.4e-45 184.5 166 52.4
ClCG08G016900 Citrullus lanatus HOM05D004267 ORTHO05D005267 1.1e-44 184.1 166 51.8
Cfa017926 Carpinus fangiana HOM05D004267 ORTHO05D005267 1.4e-44 183.7 166 50.6
Nn8g38967 Nelumbo nucifera HOM05D004267 ORTHO05D005267 1.9e-44 183.3 166 50.0
Atru.chr7.2026 Acer truncatum HOM05D004267 ORTHO05D005267 2.4e-44 183.0 166 50.6
CiPaw.15G042300 Carya illinoinensis HOM05D004267 ORTHO05D005267 3.2e-44 182.6 166 51.2
Migut.A00159 Erythranthe guttata HOM05D004267 ORTHO05D005267 4.2e-44 182.2 166 50.6
Lj5g0002830 Lotus japonicus HOM05D004267 ORTHO05D005267 5.4e-44 181.8 166 50.0
arahy.Tifrunner.gnm1.ann1.35PLQF Arachis hypogaea HOM05D004267 ORTHO05D005267 7.1e-44 181.4 166 50.6
TPR.G12986 Trifolium pratense HOM05D004267 ORTHO05D005267 7.1e-44 181.4 166 47.6
Psat6g019000 Pisum sativum HOM05D004267 ORTHO05D005267 9.3e-44 181.0 166 47.6
SGA_v2.0_scaffold88G27217 Striga asiatica HOM05D004267 ORTHO05D005267 9.3e-44 181.0 166 49.4
Lsat_1_v5_gn_3_28241 Lactuca sativa HOM05D004267 ORTHO05D005267 1.2e-43 180.6 174 49.4
Medtr1g016900 Medicago truncatula HOM05D004267 ORTHO05D005267 1.2e-43 180.6 166 48.2
Cc08_g10140 Coffea canephora HOM05D004267 ORTHO05D005267 2.1e-43 179.9 164 48.8
Lj8A557T6 Lonicera japonica HOM05D004267 ORTHO05D005267 2.7e-43 179.5 161 50.3
Manes.03G046100 Manihot esculenta HOM05D004267 ORTHO05D005267 2.7e-43 179.5 166 51.8
Ca_13187_v3 Cicer arietinum L. HOM05D004267 ORTHO05D005267 4.6e-43 178.7 166 47.6
Ciclev10009729m.g Citrus clementina HOM05D004267 ORTHO05D005267 7.9e-43 177.9 166 49.4
Duzib187G0506 Durio zibethinus HOM05D004267 ORTHO05D005267 7.9e-43 177.9 166 50.6
TAR636G0904 Trochodendron aralioides HOM05D004267 ORTHO05D005267 1.3e-42 177.2 165 49.7
vmacro05276 Vaccinium macrocarpon HOM05D004267 ORTHO05D005267 1.3e-42 177.2 171 48.0
HanXRQChr17g0539351 Helianthus annuus HOM05D004267 ORTHO05D005267 1.8e-42 176.8 165 50.3
SalBow4G2144 Salvia bowleyana HOM05D004267 ORTHO05D005267 2.3e-42 176.4 166 47.0
CsaV3_2G025720 Cucumis sativus L. HOM05D004267 ORTHO05D005267 3.0e-42 176.0 166 48.2
PGR031G1882 Punica granatum HOM05D004267 ORTHO05D005267 3.0e-42 176.0 166 50.0
Thecc.09G050400 Theobroma cacao HOM05D004267 ORTHO05D005267 5.1e-42 175.3 166 48.2
ECA246G5265 Erigeron canadensis HOM05D004267 ORTHO05D005267 8.7e-42 174.5 172 48.8
THA.LOC104803799 Tarenaya hassleriana HOM05D004267 ORTHO05D005267 8.7e-42 174.5 166 49.4
TAR624G0139 Trochodendron aralioides HOM05D004267 ORTHO05D005267 8.7e-42 174.5 201 46.3
Eucgr.C00632 Eucalyptus grandis HOM05D004267 ORTHO05D005267 1.1e-41 174.1 165 49.7
Gorai.009G047300 Gossypium raimondii HOM05D004267 ORTHO05D005267 1.5e-41 173.7 166 50.0
Gohir.A06G090500 Gossypium hirsutum HOM05D004267 ORTHO05D005267 1.9e-41 173.3 164 50.6
Gohir.D06G089500 Gossypium hirsutum HOM05D004267 ORTHO05D005267 1.9e-41 173.3 164 50.6
Gorai.010G103400 Gossypium raimondii HOM05D004267 ORTHO05D005267 1.9e-41 173.3 164 50.6
RcHm_v2.0_Chr6g0310421 Rosa chinensis HOM05D004267 ORTHO05D005267 2.5e-41 172.9 166 49.4
Gohir.A05G044300 Gossypium hirsutum HOM05D004267 ORTHO05D005267 4.3e-41 172.2 166 48.8
Duzib168G1102 Durio zibethinus HOM05D004267 ORTHO05D005267 1.3e-40 170.6 166 47.6
Peaxi162Scf00247g00612 Petunia axillaris HOM05D004267 ORTHO05D005267 1.6e-40 170.2 166 48.8
Lalb_Chr14g0367901 Lupinus albus HOM05D004267 ORTHO05D005267 4.8e-40 168.7 166 47.0
Aa31sc248G70 Aethionema arabicum HOM05D004267 ORTHO05D005267 8.1e-40 167.9 166 50.6
Dinv27959 Davidia involucrata HOM05D004267 ORTHO05D005267 8.1e-40 167.9 165 47.9
A01p05350 Brassica napus HOM05D004267 ORTHO05D005267 1.1e-39 167.5 166 50.0
unitig_578.g16576 Utricularia gibba HOM05D004267 ORTHO05D005267 1.1e-39 167.5 165 47.3
ATR0789G016 Amborella trichopoda HOM05D004267 ORTHO05D005267 1.8e-39 166.8 166 49.4
BolC1t00557H Brassica oleracea HOM05D004267 ORTHO05D005267 3.1e-39 166.0 166 49.4
BraA01t00509Z Brassica rapa HOM05D004267 ORTHO05D005267 3.1e-39 166.0 166 49.4
CANSAT01G0851 Cannabis sativa HOM05D004267 ORTHO05D005267 3.1e-39 166.0 166 47.6
CANSAT01G1320 Cannabis sativa HOM05D004267 ORTHO05D005267 3.1e-39 166.0 166 47.6
FAN24G1314 Fragaria x ananassa HOM05D004267 ORTHO05D005267 3.1e-39 166.0 166 47.0
Potri.006G233500 Populus trichocarpa HOM05D004267 ORTHO05D005267 3.1e-39 166.0 166 48.2
FvH4_2g32280 Fragaria vesca HOM05D004267 ORTHO05D005267 5.3e-39 165.2 166 47.0
FAN20G1958 Fragaria x ananassa HOM05D004267 ORTHO05D005267 6.9e-39 164.9 166 47.0
C01p05770 Brassica napus HOM05D004267 ORTHO05D005267 9.0e-39 164.5 166 49.4
BcaC09g52093 Brassica carinata HOM05D004267 ORTHO05D005267 1.2e-38 164.1 166 49.4
Aqoxy7G03943 Aquilegia oxysepala HOM05D004267 ORTHO05D005267 2.0e-38 163.3 161 47.8
Sc06g0000890 Simmondsia chinensis HOM05D004267 ORTHO05D005267 2.0e-38 163.3 166 47.0
A03p61690 Brassica napus HOM05D004267 ORTHO05D005267 2.6e-38 162.9 166 49.4
C07p59420 Brassica napus HOM05D004267 ORTHO05D005267 2.6e-38 162.9 166 49.4
Os01g0565600 Oryza sativa ssp. japonica HOM05D004267 ORTHO05D005267 3.4e-38 162.5 169 47.9
PSO210G6502 Papaver somniferum HOM05D004267 ORTHO05D005267 3.4e-38 162.5 166 47.6
RcHm_v2.0_Chr6g0310431 Rosa chinensis HOM05D004267 ORTHO05D005267 4.5e-38 162.2 168 47.6
AL7G18760 Arabidopsis lyrata HOM05D004267 ORTHO05D005267 5.8e-38 161.8 166 49.4
Sp7g30710 Schrenkiella parvula HOM05D004267 ORTHO05D005267 5.8e-38 161.8 166 48.8
Sc09g0009630 Simmondsia chinensis HOM05D004267 ORTHO05D005267 5.8e-38 161.8 166 45.8
Prupe.1G415500 Prunus persica HOM05D004267 ORTHO05D005267 7.6e-38 161.4 165 44.2
Nitab4.5_0021628g0010 Nicotiana tabacum HOM05D004267 ORTHO05D005267 1.0e-37 161.0 166 46.4
AT4G32930 Arabidopsis thaliana HOM05D004267 ORTHO05D005267 1.3e-37 160.6 166 48.8
PSO210G4696 Papaver somniferum HOM05D004267 ORTHO05D005267 1.3e-37 160.6 166 47.0
Aa31LG2G6480 Aethionema arabicum HOM05D004267 ORTHO05D005267 1.7e-37 160.2 166 50.0
Thhalv10025837m.g Eutrema salsugineum HOM05D004267 ORTHO05D005267 1.7e-37 160.2 166 48.8
arahy.Tifrunner.gnm1.ann1.97AHJW Arachis hypogaea HOM05D004267 ORTHO05D005267 2.2e-37 159.8 202 41.1
Carub.0007s0755 Capsella rubella HOM05D004267 ORTHO05D005267 2.2e-37 159.8 166 48.8
Solyc11g070050.2 Solanum lycopersicum HOM05D004267 ORTHO05D005267 1.1e-36 157.5 166 45.8
Sopen11g028730 Solanum pennellii HOM05D004267 ORTHO05D005267 1.1e-36 157.5 166 45.8
COL.COLO4_21022 Corchorus olitorius HOM05D004267 ORTHO05D005267 1.4e-36 157.1 188 43.1
MBI04_g12184_MAGBIO Magnolia biondii HOM05D004267 ORTHO05D005267 1.4e-36 157.1 188 44.1
Zm00001eb356880 Zea mays HOM05D004267 ORTHO05D005267 1.4e-36 157.1 166 48.2
FAN15G3631 Fragaria x ananassa HOM05D004267 ORTHO05D005267 2.5e-36 156.4 179 44.1
SEGI_14756 Sequoiadendron giganteum HOM05D004267 ORTHO05D005267 4.2e-36 155.6 165 44.8
BraA03t15208Z Brassica rapa HOM05D004267 ORTHO05D005267 7.1e-36 154.8 176 46.6
EL10Ac2g03945 Beta vulgaris HOM05D004267 ORTHO05D005267 1.6e-35 153.7 169 43.2
PGSC0003DMG400025516 Solanum tuberosum HOM05D004267 ORTHO05D005267 1.6e-35 153.7 166 44.0
FvH4_2g32260 Fragaria vesca HOM05D004267 ORTHO05D005267 4.6e-35 152.1 163 46.0
Solyc11g070060.2 Solanum lycopersicum HOM05D004267 ORTHO05D005267 4.3e-33 145.6 166 43.4
HPP92_004580 Vanilla planifolia HOM05D004267 ORTHO05D005267 5.7e-33 145.2 171 42.7
CAN.G309.57 Capsicum annuum HOM05D004267 ORTHO05D005267 9.6e-33 144.4 167 43.7
Hund03363 Selenicereus undatus HOM05D004267 ORTHO05D005267 9.6e-33 144.4 189 39.2
Sabra06G0181900 Salix brachista HOM05D004267 ORTHO05D005267 1.6e-32 143.7 218 36.2
MELO3C010766.2 Cucumis melo HOM05D004267 ORTHO05D005267 6.2e-32 141.7 136 47.1
Mapoly0044s0101 Marchantia polymorpha HOM05D004267 ORTHO05D005267 2.4e-31 139.8 165 40.6
Hund19479 Selenicereus undatus HOM05D004267 ORTHO05D005267 7.6e-30 134.8 177 42.4
FAN27G1738 Fragaria x ananassa HOM05D004267 ORTHO05D005267 1.3e-29 134.0 174 38.5
Gohir.D05G045900 Gossypium hirsutum HOM05D004267 ORTHO05D005267 2.2e-29 133.3 164 42.1
FAN24G0417 Fragaria x ananassa HOM05D004267 ORTHO05D005267 1.9e-28 130.2 138 44.9
Aqoxy408s001 Aquilegia oxysepala HOM05D004267 ORTHO05D005267 4.2e-28 129.0 127 48.0
FAN15G2319 Fragaria x ananassa HOM05D004267 ORTHO05D005267 4.2e-28 129.0 149 43.6
Pp3c5_10040 Physcomitrium patens HOM05D004267 ORTHO05D005267 4.2e-28 129.0 165 41.2
CARHR240940 Cardamine hirsuta HOM05D004267 ORTHO05D005267 1.3e-26 124.0 133 47.4
Cpa.g.sc78.12 Carica papaya HOM05D004267 ORTHO05D005267 3.0e-26 122.9 98 56.1
BcaNung02146 Brassica carinata HOM05D004267 ORTHO05D005267 8.7e-26 121.3 128 46.1
SMO117G0066 Selaginella moellendorffii HOM05D004267 ORTHO05D005267 1.9e-25 120.2 167 40.1
Nitab4.5_0000664g0030 Nicotiana tabacum HOM05D006502 ORTHO05D005267 3.3e-25 119.4 135 41.5
Nn6g35383 Nelumbo nucifera HOM05D004267 ORTHO05D005267 7.4e-25 118.2 129 45.0
MD08G1073900 Malus domestica HOM05D004267 ORTHO05D005267 2.2e-24 116.7 177 37.9
arahy.Tifrunner.gnm1.ann1.BB3MLG Arachis hypogaea HOM05D004267 ORTHO05D005267 4.8e-24 115.5 96 53.1
arahy.Tifrunner.gnm1.ann1.JED36R Arachis hypogaea HOM05D004267 ORTHO05D005267 4.8e-24 115.5 96 53.1
Sopen11g028740 Solanum pennellii HOM05D004267 ORTHO05D005267 6.3e-24 115.2 164 37.8
AUR62040201 Chenopodium quinoa HOM05D004267 ORTHO05D005267 1.0e-21 107.8 134 39.6
AUR62043052 Chenopodium quinoa HOM05D004267 ORTHO05D005267 1.3e-21 107.5 133 39.8
CBR_g18691 Chara braunii HOM05D004267 ORTHO05D005267 3.8e-21 105.9 157 37.6
CDE07G0102 Ceratophyllum demersum HOM05D004267 ORTHO05D005267 5.0e-21 105.5 115 44.3
Lsat_1_v5_gn_5_67680 Lactuca sativa HOM05D004267 ORTHO05D005267 1.9e-20 103.6 131 42.0
AUR62009204 Chenopodium quinoa HOM05D004267 ORTHO05D005267 2.5e-20 103.2 132 39.4
Zm00001eb159830 Zea mays HOM05D004267 ORTHO05D005267 3.6e-19 99.4 97 51.5
AagrBONN_evm.TU.Sc2ySwM_344.4469 Anthoceros agrestis HOM05D004267 ORTHO05D005267 1.8e-18 97.1 129 38.0
CDE07G1388 Ceratophyllum demersum HOM05D004267 ORTHO05D005267 9.7e-17 91.3 99 45.5
GSVIVG01016838001 Vitis vinifera HOM05D004267 ORTHO05D005267 1.8e-15 87.0 165 32.7
Aqoxy7G03891 Aquilegia oxysepala HOM05D004267 ORTHO05D005267 6.9e-15 85.1 91 49.5
Peaxi162Scf00545g00002 Petunia axillaris HOM05D004267 ORTHO05D005267 2.2e-13 80.1 86 44.2
BcaC07g42315 Brassica carinata HOM05D004267 ORTHO05D005267 3.6e-11 72.8 164 34.8
Aqoxy7G03867 Aquilegia oxysepala HOM05D004267 ORTHO05D005267 7.9e-11 71.6 127 32.3
Rhsim01G0086000 Rhododendron simsii HOM05D004267 ORTHO05D005267 8.8e-10 68.2 74 41.9
Oeu057699.1 Olea europaea HOM05D004267 ORTHO05D005267 2.6e-09 66.6 112 33.0
Peaxi162Scf00545g00001 Petunia axillaris HOM05D004267 ORTHO05D005267 6.3e-08 62.0 83 39.8
Cre09.g395800 Chlamydomonas reinhardtii HOM05D004267 ORTHO05D005267 7.0e-07 58.5 151 26.5


User provided reference genes

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