Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_004444 Daucus carota HOM05D005447 ORTHO05D006730 1.2e-172 609.8 305 100.0
DCAR_004445 Daucus carota HOM05D005447 ORTHO05D006730 8.9e-104 380.9 263 71.1
Dinv27967 Davidia involucrata HOM05D005447 ORTHO05D006730 2.8e-97 359.4 247 69.6
HanXRQChr09g0251181 Helianthus annuus HOM05D005447 ORTHO05D006730 6.8e-96 354.8 252 69.8
Cc08_g10370 Coffea canephora HOM05D005447 ORTHO05D006730 1.9e-93 346.7 246 67.9
CSS0008615 Camellia sinensis var. sinensis HOM05D005447 ORTHO05D006730 1.6e-92 343.6 248 66.1
Peaxi162Scf00436g00831 Petunia axillaris HOM05D005447 ORTHO05D006730 1.6e-92 343.6 251 66.9
Lsat_1_v5_gn_6_7400 Lactuca sativa HOM05D005447 ORTHO05D006730 2.7e-92 342.8 256 65.6
ECA233G2666 Erigeron canadensis HOM05D005447 ORTHO05D006730 3.5e-92 342.4 254 65.7
CSS0040006 Camellia sinensis var. sinensis HOM05D005447 ORTHO05D006730 1.3e-91 340.5 256 66.4
Actinidia30302 Actinidia chinensis HOM05D005447 ORTHO05D006730 3.9e-91 339.0 248 66.9
Sopen12g031820 Solanum pennellii HOM05D005447 ORTHO05D006730 5.1e-91 338.6 251 65.3
Hma1.2p1_2708F.1_g327220 Hydrangea macrophylla HOM05D005447 ORTHO05D006730 6.6e-91 338.2 247 66.4
Nitab4.5_0000738g0170 Nicotiana tabacum HOM05D005447 ORTHO05D006730 6.6e-91 338.2 243 65.8
Solyc12g095920.2 Solanum lycopersicum HOM05D005447 ORTHO05D006730 1.5e-90 337.0 251 65.3
Hma1.2p1_1213F.1_g267530 Hydrangea macrophylla HOM05D005447 ORTHO05D006730 1.9e-90 336.7 247 66.0
vmacro00161 Vaccinium macrocarpon HOM05D005447 ORTHO05D006730 2.5e-90 336.3 267 62.9
Ciclev10009241m.g Citrus clementina HOM05D005447 ORTHO05D006730 4.3e-90 335.5 251 64.1
PGSC0003DMG400029302 Solanum tuberosum HOM05D005447 ORTHO05D006730 7.3e-90 334.7 233 65.7
Lju3103C0G11 Lonicera japonica HOM05D005447 ORTHO05D006730 6.2e-89 331.6 276 60.1
Cpa.g.sc7.194 Carica papaya HOM05D005447 ORTHO05D006730 8.1e-89 331.3 247 65.6
TAR626G0638 Trochodendron aralioides HOM05D005447 ORTHO05D006730 1.8e-88 330.1 246 64.6
Peaxi162Scf00064g01636 Petunia axillaris HOM05D005447 ORTHO05D006730 2.3e-88 329.7 243 64.6
Cfa017935 Carpinus fangiana HOM05D005447 ORTHO05D006730 4.4e-87 325.5 250 62.4
EL10Ac2g03925 Beta vulgaris HOM05D005447 ORTHO05D006730 9.9e-87 324.3 252 61.5
SGA_v2.0_scaffold1040G53805 Striga asiatica HOM05D005447 ORTHO05D006730 9.9e-87 324.3 241 62.7
SalBow4G2766 Salvia bowleyana HOM05D005447 ORTHO05D006730 1.7e-86 323.6 245 61.6
Migut.A00152 Erythranthe guttata HOM05D005447 ORTHO05D006730 2.2e-86 323.2 252 61.1
Prupe.1G414700 Prunus persica HOM05D005447 ORTHO05D006730 2.2e-86 323.2 261 61.3
Nn8g38949 Nelumbo nucifera HOM05D005447 ORTHO05D006730 6.4e-86 321.6 245 62.9
Hma1.2p1_1944F.1_g308590 Hydrangea macrophylla HOM05D005447 ORTHO05D006730 1.1e-85 320.9 246 65.0
Atru.chr7.2018 Acer truncatum HOM05D005447 ORTHO05D006730 7.1e-85 318.2 247 60.7
CiPaw.16G030000 Carya illinoinensis HOM05D005447 ORTHO05D006730 7.1e-85 318.2 253 61.7
Nitab4.5_0011306g0050 Nicotiana tabacum HOM05D005447 ORTHO05D006730 9.2e-85 317.8 258 60.5
Eucgr.C03005 Eucalyptus grandis HOM05D005447 ORTHO05D006730 1.6e-84 317.0 244 63.1
Lj1g0020487 Lotus japonicus HOM05D005447 ORTHO05D006730 3.5e-84 315.8 252 61.9
TWI34G1470 Tripterygium wilfordii HOM05D005447 ORTHO05D006730 3.5e-84 315.8 245 64.5
MSTRG.11670 Avicennia marina HOM05D005447 ORTHO05D006730 4.6e-84 315.5 249 60.6
PSO063G2264 Papaver somniferum HOM05D005447 ORTHO05D006730 7.8e-84 314.7 245 63.3
Manes.16G078100 Manihot esculenta HOM05D005447 ORTHO05D006730 1.0e-83 314.3 247 61.9
RcHm_v2.0_Chr6g0310521 Rosa chinensis HOM05D005447 ORTHO05D006730 1.0e-83 314.3 258 60.5
MD08G1073300 Malus domestica HOM05D005447 ORTHO05D006730 1.7e-83 313.5 260 60.4
CANSAT25G3707 Cannabis sativa HOM05D005447 ORTHO05D006730 2.3e-83 313.2 249 61.0
Duzib187G1160 Durio zibethinus HOM05D005447 ORTHO05D006730 3.0e-83 312.8 253 63.6
Hma1.2p1_0482F.1_g162683 Hydrangea macrophylla HOM05D005447 ORTHO05D006730 3.0e-83 312.8 238 64.7
Lalb_Chr08g0245101 Lupinus albus HOM05D005447 ORTHO05D006730 3.9e-83 312.4 250 60.4
PSO832G2924 Papaver somniferum HOM05D005447 ORTHO05D006730 5.1e-83 312.0 245 62.9
Duzib168G1543 Durio zibethinus HOM05D005447 ORTHO05D006730 8.6e-83 311.2 249 65.1
Ca_15869_v3 Cicer arietinum L. HOM05D005447 ORTHO05D006730 1.9e-82 310.1 252 59.9
Hund03355 Selenicereus undatus HOM05D005447 ORTHO05D006730 2.5e-82 309.7 241 59.3
Gorai.009G046500 Gossypium raimondii HOM05D005447 ORTHO05D006730 3.3e-82 309.3 243 64.6
QL02p001555 Quercus lobata HOM05D005447 ORTHO05D006730 3.3e-82 309.3 248 60.9
Thecc.09G051400 Theobroma cacao HOM05D005447 ORTHO05D006730 3.3e-82 309.3 233 66.5
Gohir.D05G045300 Gossypium hirsutum HOM05D005447 ORTHO05D006730 7.3e-82 308.1 243 64.2
C07p59440 Brassica napus HOM05D005447 ORTHO05D006730 9.6e-82 307.8 242 60.3
BolC7t46387H Brassica oleracea HOM05D005447 ORTHO05D006730 9.6e-82 307.8 242 60.3
Gohir.A05G043700 Gossypium hirsutum HOM05D005447 ORTHO05D006730 9.6e-82 307.8 243 64.2
HPP92_026778 Vanilla planifolia HOM05D005447 ORTHO05D006730 9.6e-82 307.8 228 63.2
Aqoxy6G02809 Aquilegia oxysepala HOM05D005447 ORTHO05D006730 1.2e-81 307.4 250 61.2
Sabra18G0050000 Salix brachista HOM05D005447 ORTHO05D006730 1.2e-81 307.4 247 63.2
Psat5g036560 Pisum sativum HOM05D005447 ORTHO05D006730 1.6e-81 307.0 253 58.5
Sc06g0000920 Simmondsia chinensis HOM05D005447 ORTHO05D006730 2.1e-81 306.6 233 63.5
arahy.Tifrunner.gnm1.ann1.H6GXLW Arachis hypogaea HOM05D005447 ORTHO05D006730 4.7e-81 305.4 246 59.8
Aa31sc248G10 Aethionema arabicum HOM05D005447 ORTHO05D006730 6.2e-81 305.1 234 62.4
Aqoxy7G03929 Aquilegia oxysepala HOM05D005447 ORTHO05D006730 1.1e-80 304.3 250 60.8
Potri.018G061800 Populus trichocarpa HOM05D005447 ORTHO05D006730 1.4e-80 303.9 247 62.3
AUR62022047 Chenopodium quinoa HOM05D005447 ORTHO05D006730 1.8e-80 303.5 245 60.4
Prupe.6G150100 Prunus persica HOM05D005447 ORTHO05D006730 3.1e-80 302.8 251 59.4
BraA03t15210Z Brassica rapa HOM05D005447 ORTHO05D006730 4.0e-80 302.4 242 59.9
Glyma.06G051000 Glycine max HOM05D005447 ORTHO05D006730 4.0e-80 302.4 258 58.1
Medtr3g081440 Medicago truncatula HOM05D005447 ORTHO05D006730 4.0e-80 302.4 253 57.3
A03p61720 Brassica napus HOM05D005447 ORTHO05D006730 5.2e-80 302.0 242 59.5
arahy.Tifrunner.gnm1.ann1.PT16FZ Arachis hypogaea HOM05D005447 ORTHO05D006730 6.9e-80 301.6 246 58.5
Thhalv10025994m.g Eutrema salsugineum HOM05D005447 ORTHO05D006730 6.9e-80 301.6 257 56.8
THA.LOC104803734 Tarenaya hassleriana HOM05D005447 ORTHO05D006730 6.9e-80 301.6 230 62.6
unitig_748.g8015 Utricularia gibba HOM05D005447 ORTHO05D006730 1.2e-79 300.8 230 61.3
Sp7g30740 Schrenkiella parvula HOM05D005447 ORTHO05D006730 2.0e-79 300.1 253 58.1
MELO3C016858.2 Cucumis melo HOM05D005447 ORTHO05D006730 5.8e-79 298.5 252 56.7
ATR0789G081 Amborella trichopoda HOM05D005447 ORTHO05D006730 7.6e-79 298.1 246 61.0
BcaNung02148 Brassica carinata HOM05D005447 ORTHO05D006730 7.6e-79 298.1 242 58.7
CARHR240980 Cardamine hirsuta HOM05D005447 ORTHO05D006730 1.3e-78 297.4 246 59.8
FvH4_2g32160 Fragaria vesca HOM05D005447 ORTHO05D006730 1.3e-78 297.4 245 58.4
Sed0025565 Sechium edule HOM05D005447 ORTHO05D006730 1.7e-78 297.0 257 56.8
VMungo1309G1567 Vigna mungo HOM05D005447 ORTHO05D006730 2.2e-78 296.6 252 56.3
AL7G18730 Arabidopsis lyrata HOM05D005447 ORTHO05D006730 3.8e-78 295.8 232 60.8
PGR044G0161 Punica granatum HOM05D005447 ORTHO05D006730 4.9e-78 295.4 259 58.7
AT4G32960 Arabidopsis thaliana HOM05D005447 ORTHO05D006730 8.4e-78 294.7 232 60.8
Phvul.009G076500 Phaseolus vulgaris HOM05D005447 ORTHO05D006730 8.4e-78 294.7 252 56.7
CsaV3_4G035510 Cucumis sativus L. HOM05D005447 ORTHO05D006730 1.1e-77 294.3 252 56.0
FAN27G1388 Fragaria x ananassa HOM05D005447 ORTHO05D006730 1.1e-77 294.3 245 57.6
Carub.0007s0752 Capsella rubella HOM05D005447 ORTHO05D006730 1.4e-77 293.9 245 58.0
Psat5g106840 Pisum sativum HOM05D005447 ORTHO05D006730 1.3e-75 287.3 252 55.6
Lj7C280G4 Lonicera japonica HOM05D005447 ORTHO05D006730 8.7e-75 284.6 276 54.3
COL.COLO4_21030 Corchorus olitorius HOM05D005447 ORTHO05D006730 6.9e-72 275.0 249 58.2
AUR62009180 Chenopodium quinoa HOM05D005447 ORTHO05D006730 9.3e-69 264.6 220 59.1
THA.LOC104818575 Tarenaya hassleriana HOM05D005447 ORTHO05D006730 3.9e-67 259.2 225 56.4
CARHR240970 Cardamine hirsuta HOM05D005447 ORTHO05D006730 5.6e-66 255.4 252 53.2
Os06g0150100 Oryza sativa ssp. japonica HOM05D005447 ORTHO05D006730 5.6e-66 255.4 274 48.2
AT4G32970 Arabidopsis thaliana HOM05D005447 ORTHO05D006730 7.4e-66 255.0 250 53.2
Carub.0007s0751 Capsella rubella HOM05D005447 ORTHO05D006730 1.3e-65 254.2 234 54.7
AL7G18720 Arabidopsis lyrata HOM05D005447 ORTHO05D006730 3.7e-65 252.7 220 58.2
Nitab4.5_0001179g0010 Nicotiana tabacum HOM05D005447 ORTHO05D006730 6.9e-64 248.4 195 63.6
Pp3c6_24590 Physcomitrium patens HOM05D005447 ORTHO05D006730 5.8e-63 245.4 265 49.1
SEGI_08476 Sequoiadendron giganteum HOM05D005447 ORTHO05D006730 5.8e-63 245.4 208 56.2
AUR62022045 Chenopodium quinoa HOM05D005447 ORTHO05D006730 1.1e-61 241.1 173 64.7
Zm00001eb270840 Zea mays HOM05D005447 ORTHO05D006730 1.1e-61 241.1 275 45.1
Haze_18213 Corylus avellana HOM05D005447 ORTHO05D006730 4.2e-61 239.2 171 66.7
Oeu057690.3 Olea europaea HOM05D005447 ORTHO05D006730 1.0e-59 234.6 171 66.1
Ah.11g044670 Amaranthus hybridus HOM05D005447 ORTHO05D006730 1.3e-59 234.2 245 48.6
CDE04G0748 Ceratophyllum demersum HOM05D005447 ORTHO05D006730 1.9e-58 230.3 176 64.2
Mapoly0129s0035 Marchantia polymorpha HOM05D005447 ORTHO05D006730 1.7e-54 217.2 220 49.1
ClCG05G017740 Citrullus lanatus HOM05D005447 ORTHO05D006730 6.0e-52 208.8 171 57.9
CBR_g6395 Chara braunii HOM05D005447 ORTHO05D006730 2.4e-48 196.8 230 44.8
FAN15G0839 Fragaria x ananassa HOM05D005447 ORTHO05D006730 3.1e-48 196.4 149 61.7
Nitab4.5_0000359g0050 Nicotiana tabacum HOM05D006502 ORTHO05D006730 3.2e-45 186.4 118 71.2
SMO367G0921 Selaginella moellendorffii HOM05D005447 ORTHO05D006730 2.1e-44 183.7 217 42.9
AagrBONN_evm.TU.Sc2ySwM_344.4531 Anthoceros agrestis HOM05D005447 ORTHO05D006730 1.5e-39 167.5 187 44.4
Eucgr.C03947 Eucalyptus grandis HOM05D005447 ORTHO05D006730 6.5e-38 162.2 137 60.6
MSTRG.25940 Avicennia marina HOM05D005447 ORTHO05D006730 1.8e-35 154.1 108 63.9
AUR62009181 Chenopodium quinoa HOM05D005447 ORTHO05D006730 1.8e-35 154.1 128 59.4
FAN24G0255 Fragaria x ananassa HOM05D005447 ORTHO05D006730 6.3e-33 145.6 128 57.0
Oeu036349.1 Olea europaea HOM05D005447 ORTHO05D006730 1.4e-32 144.4 128 60.9
FAN20G2744 Fragaria x ananassa HOM05D005447 ORTHO05D006730 5.3e-32 142.5 128 56.2
SEGI_23140 Sequoiadendron giganteum HOM05D005447 ORTHO05D006730 5.3e-24 115.9 132 47.7
VMungo0251G2120 Vigna mungo HOM05D005447 ORTHO05D006730 7.0e-24 115.5 137 43.8
C01p05700 Brassica napus HOM05D005447 ORTHO05D006730 1.6e-23 114.4 98 62.2
BolC1t00551H Brassica oleracea HOM05D005447 ORTHO05D006730 1.6e-23 114.4 98 62.2
GSVIVG01035346001 Vitis vinifera HOM05D005447 ORTHO05D006730 3.5e-23 113.2 91 61.5
Actinidia01202 Actinidia chinensis HOM05D005447 ORTHO05D006730 1.5e-21 107.8 81 64.2
VMungo0540G0355 Vigna mungo HOM05D005447 ORTHO05D006730 1.8e-19 100.9 107 46.7
AUR62025497 Chenopodium quinoa HOM05D005447 ORTHO05D006730 7.5e-18 95.5 75 61.3
TPR.G36227 Trifolium pratense HOM05D005447 ORTHO05D006730 1.7e-14 84.3 76 52.6
AUR62022046 Chenopodium quinoa HOM05D005447 ORTHO05D006730 8.5e-14 82.0 66 57.6
Cre13.g604850 Chlamydomonas reinhardtii HOM05D005447 ORTHO05D006730 2.5e-13 80.5 267 27.0
SHI18783 Sapria himalayana HOM05D005447 ORTHO05D006730 2.5e-13 80.5 75 48.0


User provided reference genes

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