Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_004405 Daucus carota HOM05D000123 ORTHO05D000064 1.4e-90 336.3 173 100.0
DCAR_000803 Daucus carota HOM05D000123 ORTHO05D000064 3.1e-37 159.1 173 53.2
DCAR_007733 Daucus carota HOM05D005314 ORTHO05D006522 6.7e-32 141.4 179 46.4
Potri.006G226800 Populus trichocarpa HOM05D000123 ORTHO05D000064 1.4e-29 133.7 192 44.3
Duzib187G0851 Durio zibethinus HOM05D000123 ORTHO05D000064 3.8e-27 125.6 186 41.4
Thecc.09G056300 Theobroma cacao HOM05D000123 ORTHO05D000064 8.5e-27 124.4 186 41.9
Sabra06G0175500 Salix brachista HOM05D000123 ORTHO05D000064 3.2e-26 122.5 192 41.7
COL.COLO4_21078 Corchorus olitorius HOM05D000123 ORTHO05D000064 5.5e-26 121.7 180 42.8
CAN.G20.1 Capsicum annuum HOM05D000123 ORTHO05D000064 1.6e-25 120.2 185 43.8
QL02p000947 Quercus lobata HOM05D000123 ORTHO05D000064 1.6e-25 120.2 185 44.9
Haze_18164 Corylus avellana HOM05D000123 ORTHO05D000064 8.0e-25 117.9 191 42.4
Gorai.013G220400 Gossypium raimondii HOM05D000123 ORTHO05D000064 1.8e-24 116.7 182 41.8
Duzib168G0691 Durio zibethinus HOM05D000123 ORTHO05D000064 2.3e-24 116.3 180 42.8
Gohir.D13G194400 Gossypium hirsutum HOM05D000123 ORTHO05D000064 3.0e-24 115.9 182 41.8
Gohir.A13G187500 Gossypium hirsutum HOM05D000123 ORTHO05D000064 4.0e-24 115.5 182 41.2
Cfa017967 Carpinus fangiana HOM05D000123 ORTHO05D000064 5.2e-24 115.2 189 43.4
Lj8P532T10 Lonicera japonica HOM05D000123 ORTHO05D000064 6.7e-24 114.8 190 39.5
Nitab4.5_0006852g0070 Nicotiana tabacum HOM05D000123 ORTHO05D000064 8.8e-24 114.4 184 41.8
Hma1.2p1_0544F.1_g175700 Hydrangea macrophylla HOM05D000123 ORTHO05D000064 1.5e-23 113.6 178 42.7
CSS0014079 Camellia sinensis var. sinensis HOM05D000123 ORTHO05D000064 2.0e-23 113.2 181 43.1
CiPaw.15G037500 Carya illinoinensis HOM05D000123 ORTHO05D000064 5.7e-23 111.7 171 40.9
vmacro00130 Vaccinium macrocarpon HOM05D000123 ORTHO05D000064 5.7e-23 111.7 182 42.9
Ciclev10008617m.g Citrus clementina HOM05D000123 ORTHO05D000064 9.7e-23 110.9 190 38.4
Lj8P531T41 Lonicera japonica HOM05D000123 ORTHO05D000064 1.7e-22 110.2 188 41.0
AUR62039129 Chenopodium quinoa HOM05D000123 ORTHO05D000064 2.2e-22 109.8 183 39.3
Lj8P532T11 Lonicera japonica HOM05D000123 ORTHO05D000064 4.8e-22 108.6 189 38.6
Rhsim11G0043100 Rhododendron simsii HOM05D000123 ORTHO05D000064 4.8e-22 108.6 184 41.3
AUR62009126 Chenopodium quinoa HOM05D000123 ORTHO05D000064 8.2e-22 107.8 183 39.3
Lj1g0019749 Lotus japonicus HOM05D000123 ORTHO05D000064 1.8e-21 106.7 193 39.9
Manes.03G049500 Manihot esculenta HOM05D000123 ORTHO05D000064 2.4e-21 106.3 193 39.9
Sopen08g018510 Solanum pennellii HOM05D000123 ORTHO05D000064 2.4e-21 106.3 175 40.0
MD08G1064100 Malus domestica HOM05D000123 ORTHO05D000064 7.0e-21 104.8 185 42.2
Prupe.1G410400 Prunus persica HOM05D000123 ORTHO05D000064 9.1e-21 104.4 187 41.2
Hma1.2p1_0544F.1_g175690 Hydrangea macrophylla HOM05D000123 ORTHO05D000064 1.2e-20 104.0 179 40.8
RcHm_v2.0_Chr6g0311151 Rosa chinensis HOM05D000123 ORTHO05D000064 1.2e-20 104.0 184 41.3
FvH4_2g31690 Fragaria vesca HOM05D000123 ORTHO05D000064 1.6e-20 103.6 181 39.8
PGSC0003DMG400008223 Solanum tuberosum HOM05D000123 ORTHO05D000064 1.6e-20 103.6 180 39.4
Peaxi162Scf00327g00413 Petunia axillaris HOM05D000123 ORTHO05D000064 2.0e-20 103.2 159 39.0
HanXRQChr13g0409921 Helianthus annuus HOM05D000123 ORTHO05D000064 3.5e-20 102.4 171 39.8
SGA_v2.0_scaffold169G38699 Striga asiatica HOM05D000123 ORTHO05D000064 7.7e-20 101.3 178 38.8
Lj8P532T12 Lonicera japonica HOM05D000123 ORTHO05D000064 1.0e-19 100.9 187 38.5
Lj8C533G1 Lonicera japonica HOM05D000123 ORTHO05D000064 1.3e-19 100.5 191 37.2
Ah.10g034180 Amaranthus hybridus HOM05D000123 ORTHO05D000064 1.7e-19 100.1 176 38.1
Lalb_Chr08g0245011 Lupinus albus HOM05D000123 ORTHO05D000064 2.2e-19 99.8 191 37.7
Oeu013997.1 Olea europaea HOM05D000123 ORTHO05D000064 2.2e-19 99.8 148 39.9
TAR383G0684 Trochodendron aralioides HOM05D000123 ORTHO05D000064 2.2e-19 99.8 191 39.3
Glyma.04G052000 Glycine max HOM05D000123 ORTHO05D000064 3.8e-19 99.0 183 38.3
FAN27G2195 Fragaria x ananassa HOM05D000123 ORTHO05D000064 8.5e-19 97.8 181 38.7
Solyc08g062960.4 Solanum lycopersicum HOM05D000123 ORTHO05D000064 8.5e-19 97.8 161 39.1
Eucgr.C00664 Eucalyptus grandis HOM05D000123 ORTHO05D000064 1.5e-18 97.1 162 38.3
Cpa.g.sc7.163 Carica papaya HOM05D000123 ORTHO05D000064 1.9e-18 96.7 178 36.0
FAN15G2073 Fragaria x ananassa HOM05D000123 ORTHO05D000064 1.9e-18 96.7 181 38.1
Eucgr.C03056 Eucalyptus grandis HOM05D000123 ORTHO05D000064 2.5e-18 96.3 179 39.1
Sc09g0009910 Simmondsia chinensis HOM05D000123 ORTHO05D000064 2.5e-18 96.3 160 38.8
Ca_15824_v3 Cicer arietinum L. HOM05D000123 ORTHO05D000064 3.2e-18 95.9 174 40.2
Ca_15858_v3 Cicer arietinum L. HOM05D000123 ORTHO05D000064 3.2e-18 95.9 174 40.2
arahy.Tifrunner.gnm1.ann1.ABBA5Z Arachis hypogaea HOM05D000123 ORTHO05D000064 4.2e-18 95.5 175 37.1
arahy.Tifrunner.gnm1.ann1.GW3WU5 Arachis hypogaea HOM05D000123 ORTHO05D000064 4.2e-18 95.5 186 36.6
Oeu036327.2 Olea europaea HOM05D000123 ORTHO05D000064 4.2e-18 95.5 165 37.6
arahy.Tifrunner.gnm1.ann1.5FT298 Arachis hypogaea HOM05D000123 ORTHO05D000064 5.5e-18 95.1 186 37.1
ECA240G4351 Erigeron canadensis HOM05D000123 ORTHO05D000064 7.2e-18 94.7 170 39.4
Glyma.14G096800 Glycine max HOM05D000123 ORTHO05D000064 9.4e-18 94.4 180 40.0
QL11p022570 Quercus lobata HOM05D000123 ORTHO05D000064 9.4e-18 94.4 173 40.5
Medtr3g104550 Medicago truncatula HOM05D000123 ORTHO05D000064 2.1e-17 93.2 187 38.5
ClCG08G017080 Citrullus lanatus HOM05D000123 ORTHO05D000064 3.6e-17 92.4 179 37.4
Glyma.17G227600 Glycine max HOM05D000123 ORTHO05D000064 4.7e-17 92.0 181 39.2
Lsat_1_v5_gn_5_48320 Lactuca sativa HOM05D000123 ORTHO05D000064 8.0e-17 91.3 170 38.2
Cc08_g10810 Coffea canephora HOM05D000123 ORTHO05D000064 1.4e-16 90.5 189 37.6
MD15G1057700 Malus domestica HOM05D000123 ORTHO05D000064 1.4e-16 90.5 184 40.2
Migut.E01778 Erythranthe guttata HOM05D000123 ORTHO05D000064 1.8e-16 90.1 170 39.4
TAR624G0010 Trochodendron aralioides HOM05D000123 ORTHO05D000064 3.0e-16 89.4 185 36.2
TPR.G3565 Trifolium pratense HOM05D000123 ORTHO05D000064 5.2e-16 88.6 187 37.4
TWI63G1398 Tripterygium wilfordii HOM05D000123 ORTHO05D000064 5.2e-16 88.6 169 37.9
MBI01_g20343_MAGBIO Magnolia biondii HOM05D000123 ORTHO05D000064 8.8e-16 87.8 191 35.6
Hund03328 Selenicereus undatus HOM05D000123 ORTHO05D000064 8.8e-16 87.8 179 35.8
Lalb_Chr23g0267811 Lupinus albus HOM05D000123 ORTHO05D000064 1.2e-15 87.4 188 34.6
GSVIVG01035385001 Vitis vinifera HOM05D000123 ORTHO05D000064 1.2e-15 87.4 176 34.7
Phvul.001G037000 Phaseolus vulgaris HOM05D000123 ORTHO05D000064 2.0e-15 86.7 185 36.2
Dinv22884 Davidia involucrata HOM05D000123 ORTHO05D000064 2.6e-15 86.3 171 38.0
CsaV3_2G025510 Cucumis sativus L. HOM05D000123 ORTHO05D000064 4.4e-15 85.5 178 35.4
Carub.0004s0601 Capsella rubella HOM05D000123 ORTHO05D000064 5.7e-15 85.1 176 35.8
VMungo1309G3165 Vigna mungo HOM05D000123 ORTHO05D000064 9.8e-15 84.3 181 37.6
EL10Ac2g03834 Beta vulgaris HOM05D000123 ORTHO05D000064 1.3e-14 84.0 142 40.8
BcaC01g04897 Brassica carinata HOM05D000123 ORTHO05D000064 1.7e-14 83.6 175 34.9
C03p32530 Brassica napus HOM05D000123 ORTHO05D000064 1.7e-14 83.6 175 34.9
TAR636G3522 Trochodendron aralioides HOM05D000123 ORTHO05D000064 2.2e-14 83.2 190 34.2
PGR044G1506 Punica granatum HOM05D000123 ORTHO05D000064 2.8e-14 82.8 183 35.0
Nn6g35512 Nelumbo nucifera HOM05D000123 ORTHO05D000064 4.8e-14 82.0 188 34.6
Sp4g06150 Schrenkiella parvula HOM05D000123 ORTHO05D000064 4.8e-14 82.0 176 36.4
Psat5g036400 Pisum sativum HOM05D000123 ORTHO05D000064 8.3e-14 81.3 183 36.1
BolC3t15592H Brassica oleracea HOM05D000123 ORTHO05D000064 1.1e-13 80.9 175 34.3
Phvul.009G078300 Phaseolus vulgaris HOM05D000123 ORTHO05D000064 1.1e-13 80.9 189 37.0
BcaB01g03014 Brassica carinata HOM05D000123 ORTHO05D000064 2.4e-13 79.7 177 35.0
Sed0025709 Sechium edule HOM05D000123 ORTHO05D000064 2.4e-13 79.7 184 32.1
MELO3C010748.2 Cucumis melo HOM05D000123 ORTHO05D000064 3.1e-13 79.3 179 33.0
QL04p071344 Quercus lobata HOM05D003037 ORTHO05D000064 3.1e-13 79.3 164 39.0
HanXRQChr03g0079851 Helianthus annuus HOM05D000123 ORTHO05D000064 7.0e-13 78.2 127 42.5
BraA03t11922Z Brassica rapa HOM05D000123 ORTHO05D000064 2.0e-12 76.6 175 33.7
arahy.Tifrunner.gnm1.ann1.FJH25Q Arachis hypogaea HOM05D000123 ORTHO05D000064 7.7e-12 74.7 175 32.6
A03p27090 Brassica napus HOM05D000123 ORTHO05D000064 1.0e-11 74.3 175 33.7
CARHR114930 Cardamine hirsuta HOM05D000123 ORTHO05D000064 1.0e-11 74.3 181 35.4
Hund19443 Selenicereus undatus HOM05D000123 ORTHO05D000064 3.8e-11 72.4 187 36.4
VMungo0647G1274 Vigna mungo HOM05D000123 ORTHO05D000064 3.8e-11 72.4 152 36.8
Oeu018633.1 Olea europaea HOM05D000123 ORTHO05D000064 8.5e-11 71.2 168 36.3
Aa31LG5G9630 Aethionema arabicum HOM05D000123 ORTHO05D000064 1.1e-10 70.9 160 34.4
HPP92_003979 Vanilla planifolia HOM05D000123 ORTHO05D000064 1.9e-10 70.1 174 31.0
Aqoxy7G04026 Aquilegia oxysepala HOM05D000123 ORTHO05D000064 3.2e-10 69.3 184 32.6
Thhalv10002333m.g Eutrema salsugineum HOM05D000123 ORTHO05D000064 5.5e-10 68.6 162 35.8
Aqoxy7G01183 Aquilegia oxysepala HOM05D000123 ORTHO05D000064 9.4e-10 67.8 175 33.1
AT2G26150 Arabidopsis thaliana HOM05D000123 ORTHO05D000064 2.7e-09 66.2 163 34.4
AL4G18400 Arabidopsis lyrata HOM05D000123 ORTHO05D000064 4.7e-09 65.5 162 34.0
ATR0789G011 Amborella trichopoda HOM05D000123 ORTHO05D000064 6.1e-09 65.1 191 31.9
PSO210G3934 Papaver somniferum HOM05D000123 ORTHO05D000064 1.4e-08 63.9 174 32.8
PSO210G3726 Papaver somniferum HOM05D000123 ORTHO05D000064 2.3e-08 63.2 174 31.0
CANSAT25G0252 Cannabis sativa HOM05D000123 ORTHO05D000064 1.2e-07 60.8 176 31.8
Manes.16G081500 Manihot esculenta HOM05D000123 ORTHO05D000064 2.6e-07 59.7 100 37.0
PSO832G3544 Papaver somniferum HOM05D000123 ORTHO05D000064 1.7e-06 57.0 189 27.0
Oeu014743.1 Olea europaea HOM05D000123 ORTHO05D000064 2.2e-06 56.6 175 30.9
Atru.chr7.1099 Acer truncatum HOM05D000123 ORTHO05D000064 3.7e-06 55.8 88 37.5
PGR031G0926 Punica granatum HOM05D000123 ORTHO05D000064 4.9e-06 55.5 178 29.2
CDE05G2270 Ceratophyllum demersum HOM05D000123 ORTHO05D000064 6.3e-06 55.1 129 32.6
Lj7C265T7 Lonicera japonica HOM05D000123 ORTHO05D000064 8.3e-06 54.7 115 38.3
Nitab4.5_0002782g0100 Nicotiana tabacum HOM05D000123 ORTHO05D000064 8.3e-06 54.7 133 32.3


User provided reference genes

Program Settings