Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_004388 Daucus carota HOM05D004557 ORTHO05D005258 7.4e-187 657.1 352 100.0
DCAR_004389 Daucus carota HOM05D004557 ORTHO05D005258 4.8e-53 212.6 283 42.0
Actinidia25701 Actinidia chinensis HOM05D004557 ORTHO05D005258 2.3e-34 150.6 188 43.6
Dinv29489 Davidia involucrata HOM05D004557 ORTHO05D005258 6.6e-34 149.1 185 42.2
Dinv06254 Davidia involucrata HOM05D004557 ORTHO05D005258 8.6e-34 148.7 166 46.4
Dinv15528 Davidia involucrata HOM05D004557 ORTHO05D005258 8.6e-34 148.7 166 46.4
Hma1.2p1_0231F.1_g097480 Hydrangea macrophylla HOM05D004557 ORTHO05D005258 2.5e-33 147.1 204 42.6
CSS0012791 Camellia sinensis var. sinensis HOM05D004557 ORTHO05D005258 7.3e-33 145.6 166 45.8
Rhsim01G0109000 Rhododendron simsii HOM05D004557 ORTHO05D005258 3.6e-32 143.3 172 44.2
Thecc.03G250200 Theobroma cacao HOM05D004557 ORTHO05D005258 1.5e-30 137.9 195 40.0
MD08G1069500 Malus domestica HOM05D004557 ORTHO05D005258 4.4e-30 136.3 180 39.4
HanXRQChr09g0248091 Helianthus annuus HOM05D004557 ORTHO05D005258 3.7e-29 133.3 145 44.1
Lj7A235T21 Lonicera japonica HOM05D004557 ORTHO05D005258 6.4e-29 132.5 125 48.0
Manes.03G052300 Manihot esculenta HOM05D004557 ORTHO05D005258 2.4e-28 130.6 112 49.1
SGA_v2.0_scaffold64G21858 Striga asiatica HOM05D000448 ORTHO05D000291 2.4e-28 130.6 112 45.5
TAR383G0817 Trochodendron aralioides HOM05D004557 ORTHO05D005258 9.2e-28 128.6 163 39.9
Sabra06G0172400 Salix brachista HOM05D004557 ORTHO05D005258 1.6e-27 127.9 159 40.9
SGA_v2.0_scaffold20G09180 Striga asiatica HOM05D004557 ORTHO05D005258 2.0e-27 127.5 156 41.0
Lsat_1_v5_gn_7_60080 Lactuca sativa HOM05D004557 ORTHO05D005258 3.5e-27 126.7 157 38.2
MD15G1052600 Malus domestica HOM05D004557 ORTHO05D005258 7.8e-27 125.6 189 37.6
CiPaw.15G089600 Carya illinoinensis HOM05D004557 ORTHO05D005258 1.7e-26 124.4 159 40.9
CiPaw.15G089700 Carya illinoinensis HOM05D004557 ORTHO05D005258 1.7e-26 124.4 159 40.9
CiPaw.15G090600 Carya illinoinensis HOM05D004557 ORTHO05D005258 1.7e-26 124.4 159 40.9
Gohir.D08G188200 Gossypium hirsutum HOM05D004557 ORTHO05D005258 1.7e-26 124.4 183 37.7
Atru.chr7.1871 Acer truncatum HOM05D004557 ORTHO05D005258 3.0e-26 123.6 135 42.2
DCAR_000813 Daucus carota HOM05D004557 ORTHO05D005258 3.9e-26 123.2 171 38.6
Rhsim09G0050500 Rhododendron simsii HOM05D004557 ORTHO05D005258 8.6e-26 122.1 177 40.1
MELO3C011480.2 Cucumis melo HOM05D004557 ORTHO05D005258 1.1e-25 121.7 192 37.5
CsaV3_6G032010 Cucumis sativus L. HOM05D004557 ORTHO05D005258 1.5e-25 121.3 204 36.8
CiPaw.09G214400 Carya illinoinensis HOM05D004557 ORTHO05D005258 1.9e-25 120.9 153 41.2
CiPaw.15G090500 Carya illinoinensis HOM05D004557 ORTHO05D005258 1.9e-25 120.9 141 42.6
Gorai.004G198100 Gossypium raimondii HOM05D004557 ORTHO05D005258 2.5e-25 120.6 192 37.5
Nn5g28590 Nelumbo nucifera HOM05D004557 ORTHO05D005258 2.5e-25 120.6 157 38.9
QL02p000341 Quercus lobata HOM05D004557 ORTHO05D005258 5.6e-25 119.4 142 39.4
TPR.G3531 Trifolium pratense HOM05D004557 ORTHO05D005258 5.6e-25 119.4 175 33.1
Cfa018005 Carpinus fangiana HOM05D004557 ORTHO05D005258 7.3e-25 119.0 184 38.0
Aqoxy7G01097 Aquilegia oxysepala HOM05D004557 ORTHO05D005258 9.5e-25 118.6 157 35.0
ClCG08G009910 Citrullus lanatus HOM05D004557 ORTHO05D005258 9.5e-25 118.6 179 38.5
Potri.006G223100 Populus trichocarpa HOM05D004557 ORTHO05D005258 1.2e-24 118.2 117 43.6
Sed0027657 Sechium edule HOM05D004557 ORTHO05D005258 1.6e-24 117.9 132 46.2
Prupe.1G406500 Prunus persica HOM05D004557 ORTHO05D005258 2.8e-24 117.1 192 37.0
ECA240G2282 Erigeron canadensis HOM05D004557 ORTHO05D005258 3.6e-24 116.7 118 44.1
TWI34G1499 Tripterygium wilfordii HOM05D004557 ORTHO05D005258 6.2e-24 115.9 163 41.1
Cpa.g.sc126.43 Carica papaya HOM05D004557 ORTHO05D005258 8.0e-24 115.5 146 37.7
Cc08_g01350 Coffea canephora HOM05D004557 ORTHO05D005258 1.0e-23 115.2 141 44.0
CANSAT21G2041 Cannabis sativa HOM05D004557 ORTHO05D005258 5.2e-23 112.8 158 38.6
COL.COLO4_37167 Corchorus olitorius HOM05D004557 ORTHO05D005258 5.2e-23 112.8 109 46.8
Ca_15841_v3 Cicer arietinum L. HOM05D002542 ORTHO05D010145 8.9e-23 112.1 146 37.0
arahy.Tifrunner.gnm1.ann1.50HX4L Arachis hypogaea HOM05D004557 ORTHO05D005258 3.4e-22 110.2 139 38.1
Nn6g35588 Nelumbo nucifera HOM05D004557 ORTHO05D005258 3.4e-22 110.2 126 36.5
Psat7g051600 Pisum sativum HOM05D004557 ORTHO05D005258 4.4e-22 109.8 131 38.9
arahy.Tifrunner.gnm1.ann1.R4HSFZ Arachis hypogaea HOM05D004557 ORTHO05D005258 7.5e-22 109.0 136 39.0
Medtr3g104830 Medicago truncatula HOM05D004557 ORTHO05D005258 1.3e-21 108.2 166 34.3
Lalb_Chr19g0132651 Lupinus albus HOM05D004557 ORTHO05D005258 2.2e-21 107.5 160 36.2
Oeu037989.1 Olea europaea HOM05D004557 ORTHO05D005258 2.2e-21 107.5 143 40.6
PSO210G7071 Papaver somniferum HOM05D004557 ORTHO05D005258 2.9e-21 107.1 126 40.5
Lalb_Chr08g0244871 Lupinus albus HOM05D004557 ORTHO05D005258 1.4e-20 104.8 186 33.3
Psat5g030600 Pisum sativum HOM05D004557 ORTHO05D005258 2.4e-20 104.0 191 31.9
Phvul.009G080800 Phaseolus vulgaris HOM05D004557 ORTHO05D005258 4.1e-20 103.2 149 36.2
Migut.B01423 Erythranthe guttata HOM05D004557 ORTHO05D005258 7.0e-20 102.4 155 34.2
SGA_v2.0_scaffold98G29377 Striga asiatica HOM05D004557 ORTHO05D005258 2.0e-19 100.9 169 37.9
RcHm_v2.0_Chr7g0228051 Rosa chinensis HOM05D004557 ORTHO05D005258 3.5e-19 100.1 125 39.2
PSO388G0001 Papaver somniferum HOM05D004557 ORTHO05D005258 4.6e-19 99.8 156 32.7
Glyma.20G016400 Glycine max HOM05D004557 ORTHO05D005258 1.3e-18 98.2 163 33.1
Glyma.06G198300 Glycine max HOM05D004557 ORTHO05D005258 2.3e-18 97.4 160 33.1
Glyma.20G016500 Glycine max HOM05D004557 ORTHO05D005258 5.0e-18 96.3 112 36.6
unitig_26.g8849 Utricularia gibba HOM05D004557 ORTHO05D005258 1.5e-17 94.7 162 35.8
THA.LOC104827156 Tarenaya hassleriana HOM05D004557 ORTHO05D005258 5.6e-17 92.8 99 41.4
Glyma.04G054800 Glycine max HOM05D004557 ORTHO05D005258 1.6e-16 91.3 129 36.4
Nitab4.5_0004953g0040 Nicotiana tabacum HOM05D002542 ORTHO05D010145 4.7e-16 89.7 159 36.5
Glyma.20G016100 Glycine max HOM05D004557 ORTHO05D005258 6.2e-16 89.4 179 32.4
SalBow5G2684 Salvia bowleyana HOM05D004557 ORTHO05D005258 6.2e-16 89.4 163 35.0
VMungo1309G1176 Vigna mungo HOM05D004557 ORTHO05D005258 6.2e-16 89.4 142 33.1
Lj1g0020695 Lotus japonicus HOM05D004557 ORTHO05D005258 1.1e-15 88.6 119 34.5
Gohir.D08G268633 Gossypium hirsutum HOM05D004557 ORTHO05D005258 1.4e-15 88.2 101 36.6
Sed0013662 Sechium edule HOM05D004557 ORTHO05D005258 4.0e-15 86.7 107 36.4
Duzib084G1100 Durio zibethinus HOM05D006762 ORTHO05D003505 8.9e-15 85.5 82 43.9
FAN13G2684 Fragaria x ananassa HOM05D004557 ORTHO05D005258 2.0e-14 84.3 101 40.6
ClCG05G018170 Citrullus lanatus HOM05D004557 ORTHO05D005258 2.6e-14 84.0 129 31.8
FAN08G0395 Fragaria x ananassa HOM05D004557 ORTHO05D005258 3.4e-14 83.6 101 39.6
FAN06G3367 Fragaria x ananassa HOM05D004557 ORTHO05D005258 4.4e-14 83.2 183 32.2
CAN.G1245.2 Capsicum annuum HOM05D004557 ORTHO05D005258 7.5e-14 82.4 147 34.7
vmacro20759 Vaccinium macrocarpon HOM05D004557 ORTHO05D005258 9.8e-14 82.0 171 30.4
Eucgr.I02597 Eucalyptus grandis HOM05D004557 ORTHO05D005258 1.3e-13 81.6 83 43.4
VMungo1309G0311 Vigna mungo HOM05D004557 ORTHO05D005258 2.2e-13 80.9 108 35.2
Peaxi162Scf00809g00213 Petunia axillaris HOM05D002542 ORTHO05D010145 8.3e-13 79.0 200 30.0
FAN04G2671 Fragaria x ananassa HOM05D004557 ORTHO05D005258 1.1e-12 78.6 101 38.6
Carub.0008s1244 Capsella rubella HOM05D004557 ORTHO05D005258 4.1e-12 76.6 119 28.6
AT5G16100 Arabidopsis thaliana HOM05D004557 ORTHO05D005258 7.1e-12 75.9 125 30.4
Medtr3g465110 Medicago truncatula HOM05D004557 ORTHO05D005258 1.2e-11 75.1 156 28.8
Carub.0006s1429 Capsella rubella HOM05D004557 ORTHO05D005258 1.6e-11 74.7 137 32.8
Carub.0055s0004 Capsella rubella HOM05D004557 ORTHO05D005258 6.0e-11 72.8 137 32.1
Aa31LG11G13510 Aethionema arabicum HOM05D004557 ORTHO05D005258 1.0e-10 72.0 121 31.4
Sp6g28040 Schrenkiella parvula HOM05D004557 ORTHO05D005258 1.0e-10 72.0 121 29.8
Carub.0002s0764 Capsella rubella HOM05D004557 ORTHO05D005258 1.3e-10 71.6 137 32.1
Solyc08g062200.3 Solanum lycopersicum HOM05D002542 ORTHO05D010145 1.7e-10 71.2 157 36.3
Actinidia29314 Actinidia chinensis HOM05D004557 ORTHO05D005258 3.0e-10 70.5 82 46.3
Eucgr.J00345 Eucalyptus grandis HOM05D004557 ORTHO05D005258 3.9e-10 70.1 74 41.9
Eucgr.L01064 Eucalyptus grandis HOM05D004557 ORTHO05D005258 3.9e-10 70.1 74 41.9
Nitab4.5_0007748g0010 Nicotiana tabacum HOM05D002542 ORTHO05D010145 3.9e-10 70.1 130 37.7
Thhalv10013525m.g Eutrema salsugineum HOM05D004557 ORTHO05D005258 5.1e-10 69.7 100 31.0
A10p22940 Brassica napus HOM05D004557 ORTHO05D005258 3.3e-09 67.0 118 31.4
BraA10t44362Z Brassica rapa HOM05D004557 ORTHO05D005258 3.3e-09 67.0 118 31.4
Sopen08g017790 Solanum pennellii HOM05D004557 ORTHO05D005258 3.3e-09 67.0 131 36.6
C09p60890 Brassica napus HOM05D004557 ORTHO05D005258 5.6e-09 66.2 100 33.0
BolC9t58932H Brassica oleracea HOM05D004557 ORTHO05D005258 5.6e-09 66.2 100 33.0
Haze_18125 Corylus avellana HOM05D004557 ORTHO05D005258 7.3e-09 65.9 83 41.0
CARHR197200 Cardamine hirsuta HOM05D004557 ORTHO05D005258 1.6e-08 64.7 107 32.7
AL6G26980 Arabidopsis lyrata HOM05D004557 ORTHO05D005258 4.7e-08 63.2 177 24.9
HPP92_024782 Vanilla planifolia HOM05D004557 ORTHO05D005258 6.8e-07 59.3 111 26.1
Glyma.06G054951 Glycine max HOM05D004557 ORTHO05D005258 1.2e-06 58.5 45 46.7
BraA02t05309Z Brassica rapa HOM05D004557 ORTHO05D005258 1.5e-06 58.2 108 24.1
BcaC03g18467 Brassica carinata HOM05D004557 ORTHO05D005258 2.6e-06 57.4 108 24.1
C02p08140 Brassica napus HOM05D004557 ORTHO05D005258 2.6e-06 57.4 108 24.1
CsaV3_4G035940 Cucumis sativus L. HOM05D004557 ORTHO05D005258 2.6e-06 57.4 40 60.0
AUR62009097 Chenopodium quinoa HOM05D004557 ORTHO05D005258 9.9e-06 55.5 80 32.5


User provided reference genes

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