Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_004357 Daucus carota HOM05D005477 ORTHO05D006721 5.6e-142 507.7 271 100.0
DCAR_016636 Daucus carota HOM05D005477 ORTHO05D177708 4.3e-41 172.6 95 90.5
DCAR_016635 Daucus carota HOM05D005477 ORTHO05D006721 3.9e-34 149.4 76 97.4
DCAR_001258 Daucus carota HOM05D005477 ORTHO05D006721 7.3e-33 145.2 76 89.5
MBI18_g35539_MAGBIO Magnolia biondii HOM05D005477 ORTHO05D006721 8.9e-31 138.3 77 83.1
Dinv17881 Davidia involucrata HOM05D005477 ORTHO05D006721 1.2e-30 137.9 77 84.4
vmacro03568 Vaccinium macrocarpon HOM05D005477 ORTHO05D006721 1.2e-30 137.9 78 84.6
Dinv01135 Davidia involucrata HOM05D005477 ORTHO05D006721 2.0e-30 137.1 77 83.1
HanXRQChr09g0257861 Helianthus annuus HOM05D005477 ORTHO05D006721 3.4e-30 136.3 77 81.8
CSS0024293 Camellia sinensis var. sinensis HOM05D005477 ORTHO05D006721 4.4e-30 136.0 77 81.8
TAR624G0209 Trochodendron aralioides HOM05D005477 ORTHO05D006721 4.4e-30 136.0 77 80.5
Aqoxy1G01389 Aquilegia oxysepala HOM05D005477 ORTHO05D006721 7.5e-30 135.2 77 80.5
HanXRQChr14g0439061 Helianthus annuus HOM05D005477 ORTHO05D006721 7.5e-30 135.2 77 81.8
Cpa.g.sc2054.1 Carica papaya HOM05D005477 ORTHO05D006721 9.9e-30 134.8 81 79.0
MBI18_g18219_MAGBIO Magnolia biondii HOM05D005477 ORTHO05D006721 9.9e-30 134.8 76 81.6
Lsat_1_v5_gn_2_59701 Lactuca sativa HOM05D005477 ORTHO05D006721 1.7e-29 134.0 78 80.8
Nn7g38416 Nelumbo nucifera HOM05D005477 ORTHO05D006721 1.7e-29 134.0 77 81.8
MBI18_g21701_MAGBIO Magnolia biondii HOM05D005477 ORTHO05D006721 2.2e-29 133.7 76 81.6
CARHR226980 Cardamine hirsuta HOM05D005477 ORTHO05D006721 2.9e-29 133.3 77 79.2
Os07g0498300 Oryza sativa ssp. japonica HOM05D005477 ORTHO05D006721 2.9e-29 133.3 77 80.5
Manes.03G072100 Manihot esculenta HOM05D005477 ORTHO05D006721 4.9e-29 132.5 77 80.5
CsaV3_6G053130 Cucumis sativus L. HOM05D005477 ORTHO05D006721 6.4e-29 132.1 79 77.2
PSO675G9273 Papaver somniferum HOM05D005477 ORTHO05D006721 6.4e-29 132.1 77 77.9
Hund08547 Selenicereus undatus HOM05D005477 ORTHO05D006721 6.4e-29 132.1 77 81.8
CAN.G105.21 Capsicum annuum HOM05D005477 ORTHO05D006721 8.3e-29 131.7 76 77.6
FvH4_3g13280 Fragaria vesca HOM05D005477 ORTHO05D006721 8.3e-29 131.7 77 79.2
FAN11G1325 Fragaria x ananassa HOM05D005477 ORTHO05D006721 8.3e-29 131.7 77 79.2
FAN16G3377 Fragaria x ananassa HOM05D005477 ORTHO05D006721 8.3e-29 131.7 77 79.2
FAN21G3865 Fragaria x ananassa HOM05D005477 ORTHO05D006721 8.3e-29 131.7 77 79.2
HPP92_026455 Vanilla planifolia HOM05D005477 ORTHO05D006721 8.3e-29 131.7 76 80.3
Nitab4.5_0001299g0020 Nicotiana tabacum HOM05D005477 ORTHO05D006721 1.1e-28 131.3 77 76.6
THA.LOC104811905 Tarenaya hassleriana HOM05D005477 ORTHO05D006721 1.1e-28 131.3 77 77.9
THA.LOC104812922 Tarenaya hassleriana HOM05D005477 ORTHO05D006721 1.4e-28 131.0 77 79.2
Peaxi162Scf00203g01320 Petunia axillaris HOM05D005477 ORTHO05D006721 1.9e-28 130.6 77 76.6
Ah.15g091860 Amaranthus hybridus HOM05D005477 ORTHO05D006721 2.4e-28 130.2 77 80.5
Cc09_g04680 Coffea canephora HOM05D005477 ORTHO05D006721 2.4e-28 130.2 77 75.3
Thhalv10026700m.g Eutrema salsugineum HOM05D005477 ORTHO05D006721 2.4e-28 130.2 77 76.6
Ah.08g212300 Amaranthus hybridus HOM05D003310 ORTHO05D006721 3.2e-28 129.8 77 79.2
CANSAT35G0922 Cannabis sativa HOM05D005477 ORTHO05D006721 3.2e-28 129.8 77 80.5
MELO3C006999.2 Cucumis melo HOM05D005477 ORTHO05D006721 3.2e-28 129.8 77 77.9
FAN25G0727 Fragaria x ananassa HOM05D005477 ORTHO05D006721 3.2e-28 129.8 77 77.9
CiPaw.09G140100 Carya illinoinensis HOM05D005477 ORTHO05D006721 4.1e-28 129.4 77 77.9
Ciclev10017510m.g Citrus clementina HOM05D005477 ORTHO05D006721 4.1e-28 129.4 77 77.9
Nitab4.5_0004786g0020 Nicotiana tabacum HOM05D005477 ORTHO05D006721 4.1e-28 129.4 78 74.4
PGR042G1348 Punica granatum HOM05D005477 ORTHO05D006721 4.1e-28 129.4 77 77.9
Sp7g18580 Schrenkiella parvula HOM05D005477 ORTHO05D006721 4.1e-28 129.4 77 76.6
AL7G33670 Arabidopsis lyrata HOM05D005477 ORTHO05D006721 5.4e-28 129.0 77 76.6
AT4G20150 Arabidopsis thaliana HOM05D005477 ORTHO05D006721 5.4e-28 129.0 77 76.6
Carub.0007s2098 Capsella rubella HOM05D005477 ORTHO05D006721 5.4e-28 129.0 77 76.6
ECA238G4156 Erigeron canadensis HOM05D005477 ORTHO05D006721 5.4e-28 129.0 77 76.6
MD05G1243500 Malus domestica HOM05D005477 ORTHO05D006721 5.4e-28 129.0 77 76.6
Prupe.4G120200 Prunus persica HOM05D005477 ORTHO05D006721 5.4e-28 129.0 77 77.9
RcHm_v2.0_Chr5g0021751 Rosa chinensis HOM05D005477 ORTHO05D006721 5.4e-28 129.0 77 77.9
BcaB03g11659 Brassica carinata HOM05D005477 ORTHO05D006721 7.1e-28 128.6 77 75.3
BcaC01g00657 Brassica carinata HOM05D005477 ORTHO05D006721 7.1e-28 128.6 77 75.3
BcaC06g30645 Brassica carinata HOM05D005477 ORTHO05D006721 7.1e-28 128.6 77 75.3
ClCG01G025920 Citrullus lanatus HOM05D005477 ORTHO05D006721 7.1e-28 128.6 78 78.2
Sed0007385 Sechium edule HOM05D005477 ORTHO05D006721 7.1e-28 128.6 77 77.9
Atru.chr10.245 Acer truncatum HOM05D005477 ORTHO05D006721 9.2e-28 128.3 77 77.9
MD10G1225400 Malus domestica HOM05D005477 ORTHO05D006721 9.2e-28 128.3 77 76.6
Sopen10g001220 Solanum pennellii HOM05D005477 ORTHO05D006721 9.2e-28 128.3 77 74.0
Aa31LG6G2560 Aethionema arabicum HOM05D005477 ORTHO05D006721 1.2e-27 127.9 76 76.3
BcaNung03709 Brassica carinata HOM05D005477 ORTHO05D006721 1.2e-27 127.9 77 75.3
COL.COLO4_25033 Corchorus olitorius HOM05D005477 ORTHO05D006721 1.6e-27 127.5 77 76.6
Eucgr.E04324 Eucalyptus grandis HOM05D005477 ORTHO05D006721 1.6e-27 127.5 77 76.6
Thecc.02G001600 Theobroma cacao HOM05D005477 ORTHO05D006721 1.6e-27 127.5 77 76.6
ATR0763G104 Amborella trichopoda HOM05D005477 ORTHO05D006721 2.1e-27 127.1 75 77.3
Cfa001157 Carpinus fangiana HOM05D005477 ORTHO05D006721 2.1e-27 127.1 78 78.2
Haze_05194 Corylus avellana HOM05D005477 ORTHO05D006721 2.1e-27 127.1 78 78.2
QL11p010970 Quercus lobata HOM05D005477 ORTHO05D006721 2.1e-27 127.1 78 78.2
Sabra01G0054000 Salix brachista HOM05D005477 ORTHO05D006721 2.1e-27 127.1 77 75.3
GSVIVG01010508001 Vitis vinifera HOM05D005477 ORTHO05D006721 2.7e-27 126.7 77 75.3
A03p52320 Brassica napus HOM05D005477 ORTHO05D006721 3.5e-27 126.3 76 75.0
A08p14650 Brassica napus HOM05D005477 ORTHO05D006721 3.5e-27 126.3 76 75.0
C03p82800 Brassica napus HOM05D005477 ORTHO05D006721 3.5e-27 126.3 76 75.0
BolC3t20562H Brassica oleracea HOM05D005477 ORTHO05D006721 3.5e-27 126.3 76 75.0
BolC7t45576H Brassica oleracea HOM05D005477 ORTHO05D006721 3.5e-27 126.3 76 75.0
BraA03t14308Z Brassica rapa HOM05D005477 ORTHO05D006721 3.5e-27 126.3 76 75.0
BraA08t33453Z Brassica rapa HOM05D005477 ORTHO05D006721 3.5e-27 126.3 76 75.0
Psat7g087320 Pisum sativum HOM05D005477 ORTHO05D006721 3.5e-27 126.3 74 79.7
Sc24g0002840 Simmondsia chinensis HOM05D005477 ORTHO05D006721 3.5e-27 126.3 78 75.6
arahy.Tifrunner.gnm1.ann1.3VSL80 Arachis hypogaea HOM05D005477 ORTHO05D006721 4.6e-27 125.9 77 75.3
arahy.Tifrunner.gnm1.ann1.Z3SLP7 Arachis hypogaea HOM05D005477 ORTHO05D006721 4.6e-27 125.9 77 75.3
CiPaw.10G107900 Carya illinoinensis HOM05D005477 ORTHO05D006721 4.6e-27 125.9 76 77.6
Ca_18217_v3 Cicer arietinum L. HOM05D005477 ORTHO05D006721 4.6e-27 125.9 77 76.6
Medtr4g094792 Medicago truncatula HOM05D005477 ORTHO05D006721 4.6e-27 125.9 75 78.7
Sabra03G0113300 Salix brachista HOM05D005477 ORTHO05D006721 4.6e-27 125.9 77 75.3
BcaNung03492 Brassica carinata HOM05D005477 ORTHO05D006721 6.0e-27 125.6 77 74.0
A01p11900 Brassica napus HOM05D005477 ORTHO05D006721 6.0e-27 125.6 76 75.0
BraA01t01132Z Brassica rapa HOM05D005477 ORTHO05D006721 6.0e-27 125.6 76 75.0
Gohir.A12G050600 Gossypium hirsutum HOM05D005477 ORTHO05D006721 6.0e-27 125.6 77 75.3
Gohir.A12G050700 Gossypium hirsutum HOM05D005477 ORTHO05D006721 6.0e-27 125.6 77 75.3
Gohir.D12G048900 Gossypium hirsutum HOM05D005477 ORTHO05D006721 6.0e-27 125.6 77 75.3
Gohir.D12G049000 Gossypium hirsutum HOM05D005477 ORTHO05D006721 6.0e-27 125.6 77 75.3
Gorai.008G051800 Gossypium raimondii HOM05D005477 ORTHO05D006721 6.0e-27 125.6 77 75.3
Oeu005613.1 Olea europaea HOM05D005477 ORTHO05D006721 6.0e-27 125.6 76 75.0
MSTRG.16378 Avicennia marina HOM05D005477 ORTHO05D006721 7.8e-27 125.2 77 74.0
Glyma.05G134900 Glycine max HOM05D005477 ORTHO05D006721 7.8e-27 125.2 74 77.0
Glyma.08G090100 Glycine max HOM05D005477 ORTHO05D006721 7.8e-27 125.2 74 77.0
Gorai.008G051900 Gossypium raimondii HOM05D005477 ORTHO05D006721 7.8e-27 125.2 77 75.3
Potri.001G074901 Populus trichocarpa HOM05D005477 ORTHO05D006721 7.8e-27 125.2 77 74.0
PGSC0003DMG400011262 Solanum tuberosum HOM05D005477 ORTHO05D006721 7.8e-27 125.2 77 71.4
Zm00001eb105410 Zea mays HOM05D005477 ORTHO05D006721 1.0e-26 124.8 81 72.8
AUR62040995 Chenopodium quinoa HOM05D005477 ORTHO05D006721 1.3e-26 124.4 77 76.6
Oeu046914.1 Olea europaea HOM05D005477 ORTHO05D006721 1.7e-26 124.0 76 73.7
Peaxi162Scf00700g00728 Petunia axillaris HOM05D005477 ORTHO05D006721 1.7e-26 124.0 77 72.7
Potri.003G156301 Populus trichocarpa HOM05D005477 ORTHO05D006721 1.7e-26 124.0 77 75.3
EL10Ac7g17253 Beta vulgaris HOM05D005477 ORTHO05D006721 2.3e-26 123.6 75 80.0
AUR62042809 Chenopodium quinoa HOM05D005477 ORTHO05D006721 2.3e-26 123.6 75 78.7
C07p50750 Brassica napus HOM05D005477 ORTHO05D006721 3.0e-26 123.2 76 73.7
Lj4g0025411 Lotus japonicus HOM05D005477 ORTHO05D006721 6.6e-26 122.1 77 75.3
Zm00001eb321910 Zea mays HOM05D005477 ORTHO05D006721 6.6e-26 122.1 75 76.0
TPR.G27391 Trifolium pratense HOM05D005477 ORTHO05D006721 1.1e-25 121.3 77 72.7
Lalb_Chr07g0188151 Lupinus albus HOM05D005477 ORTHO05D006721 1.5e-25 120.9 77 74.0
Lalb_Chr13g0293041 Lupinus albus HOM05D005477 ORTHO05D006721 1.5e-25 120.9 77 70.1
unitig_748.g7487 Utricularia gibba HOM05D005477 ORTHO05D006721 1.5e-25 120.9 77 70.1
Phvul.002G187200 Phaseolus vulgaris HOM05D005477 ORTHO05D006721 2.5e-25 120.2 74 75.7
Solyc10g005230.3 Solanum lycopersicum HOM05D005477 ORTHO05D006721 2.5e-25 120.2 71 74.6
CDE12G0557 Ceratophyllum demersum HOM05D005477 ORTHO05D006721 5.6e-25 119.0 77 71.4
CiPaw.06G130100 Carya illinoinensis HOM05D005477 ORTHO05D006721 2.1e-24 117.1 76 72.4
Duzib132G0617 Durio zibethinus HOM05D005477 ORTHO05D006721 3.6e-24 116.3 77 67.5
Migut.M02030 Erythranthe guttata HOM05D005477 ORTHO05D006721 8.1e-24 115.2 74 73.0
PSO675G4749 Papaver somniferum HOM05D005477 ORTHO05D006721 2.4e-23 113.6 77 70.1
SHI16868 Sapria himalayana HOM05D005477 ORTHO05D006721 6.8e-23 112.1 72 70.8
TWI38G0021 Tripterygium wilfordii HOM05D005477 ORTHO05D006721 2.0e-22 110.5 77 63.6
Lalb_Chr07g0188141 Lupinus albus HOM05D005477 ORTHO05D006721 1.9e-20 104.0 100 52.0
Pp3c14_13800 Physcomitrium patens HOM05D005477 ORTHO05D006721 7.1e-20 102.1 75 60.0
Pp3c1_24730 Physcomitrium patens HOM05D005477 ORTHO05D006721 1.2e-19 101.3 75 58.7
TWI15G0858 Tripterygium wilfordii HOM05D005477 ORTHO05D006721 1.2e-19 101.3 77 54.5
Mapoly0053s0096 Marchantia polymorpha HOM05D005477 ORTHO05D006721 8.7e-18 95.1 75 58.7
AagrBONN_evm.TU.Sc2ySwM_362.2068 Anthoceros agrestis HOM05D005477 ORTHO05D006721 1.2e-16 91.3 78 52.6
CBR_g39209 Chara braunii HOM05D005477 ORTHO05D006721 2.8e-16 90.1 75 53.3
SMO134G0137 Selaginella moellendorffii HOM05D005477 ORTHO05D006721 1.5e-14 84.3 74 51.4
MBI15_g47666_MAGBIO Magnolia biondii HOM05D005477 ORTHO05D006721 7.6e-14 82.0 69 63.8
Oeu039133.1 Olea europaea HOM05D005477 ORTHO05D006721 2.9e-13 80.1 50 64.0
MCO10G264 Micromonas commoda HOM05D005477 ORTHO05D006721 4.9e-13 79.3 68 51.5
DCAR_001260 Daucus carota HOM05D005477 ORTHO05D175317 6.4e-13 79.0 101 49.5
GSVIVG01010076001 Vitis vinifera HOM05D005477 ORTHO05D006721 1.6e-11 74.3 51 68.6
MBI15_g35018_MAGBIO Magnolia biondii HOM05D005477 ORTHO05D006721 1.3e-08 64.7 51 62.7
Aa31LG9G8470 Aethionema arabicum HOM05D005477 ORTHO05D006721 4.0e-07 59.7 40 67.5
Nitab4.5_0000217g0090 Nicotiana tabacum HOM05D005477 ORTHO05D006721 1.2e-06 58.2 40 62.5


User provided reference genes

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