Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_004297 Daucus carota HOM05D004742 ORTHO05D005677 9.0e-98 360.5 221 100.0
DCAR_008263 Daucus carota HOM05D004742 ORTHO05D005677 1.1e-39 167.5 240 47.1
Lsat_1_v5_gn_3_18001 Lactuca sativa HOM05D004742 ORTHO05D005677 1.4e-29 134.0 252 40.1
Manes.17G011300 Manihot esculenta HOM05D004742 ORTHO05D005677 3.7e-27 125.9 232 41.4
TPR.G1023 Trifolium pratense HOM05D004742 ORTHO05D005677 8.3e-27 124.8 232 38.8
Actinidia14802 Actinidia chinensis HOM05D004742 ORTHO05D005677 1.9e-26 123.6 231 38.1
FAN04G2756 Fragaria x ananassa HOM05D004742 ORTHO05D005677 4.1e-26 122.5 233 37.3
FAN08G0406 Fragaria x ananassa HOM05D004742 ORTHO05D005677 5.4e-26 122.1 230 38.7
FvH4_5g22200 Fragaria vesca HOM05D004742 ORTHO05D005677 9.2e-26 121.3 230 38.7
FAN13G2654 Fragaria x ananassa HOM05D004742 ORTHO05D005677 9.2e-26 121.3 233 37.3
Migut.E00942 Erythranthe guttata HOM05D004742 ORTHO05D005677 1.2e-25 120.9 219 38.8
VMungo1215G1913 Vigna mungo HOM05D004742 ORTHO05D005677 2.0e-25 120.2 231 35.9
Dinv25223 Davidia involucrata HOM05D004742 ORTHO05D005677 3.5e-25 119.4 233 37.8
Glyma.01G017800 Glycine max HOM05D004742 ORTHO05D005677 3.5e-25 119.4 243 35.8
Glyma.09G205100 Glycine max HOM05D004742 ORTHO05D005677 7.8e-25 118.2 244 37.7
arahy.Tifrunner.gnm1.ann1.EZQY9P Arachis hypogaea HOM05D004742 ORTHO05D005677 1.0e-24 117.9 228 36.8
arahy.Tifrunner.gnm1.ann1.RMRK9P Arachis hypogaea HOM05D004742 ORTHO05D005677 1.0e-24 117.9 228 36.8
Lalb_Chr09g0325611 Lupinus albus HOM05D004742 ORTHO05D005677 1.0e-24 117.9 234 34.6
CiPaw.12G064300 Carya illinoinensis HOM05D004742 ORTHO05D005677 2.3e-24 116.7 115 56.5
Phvul.002G140700 Phaseolus vulgaris HOM05D004742 ORTHO05D005677 6.6e-24 115.2 231 35.1
TWI60G1233 Tripterygium wilfordii HOM05D004742 ORTHO05D005677 6.6e-24 115.2 232 39.2
Ca_06086_v3 Cicer arietinum L. HOM05D004742 ORTHO05D005677 1.1e-23 114.4 227 37.9
Medtr5g030210 Medicago truncatula HOM05D004742 ORTHO05D005677 1.1e-23 114.4 233 38.6
Medtr5g430370 Medicago truncatula HOM05D004742 ORTHO05D005677 1.1e-23 114.4 233 38.6
CSS0042903 Camellia sinensis var. sinensis HOM05D004742 ORTHO05D005677 1.9e-23 113.6 117 53.8
FAN18G2180 Fragaria x ananassa HOM05D004742 ORTHO05D005677 1.9e-23 113.6 230 37.0
PGSC0003DMG400017538 Solanum tuberosum HOM05D004742 ORTHO05D005677 2.5e-23 113.2 257 34.2
Duzib205G0563 Durio zibethinus HOM05D004742 ORTHO05D005677 5.6e-23 112.1 240 34.2
Nitab4.5_0010403g0010 Nicotiana tabacum HOM05D004742 ORTHO05D005677 5.6e-23 112.1 248 33.5
Hma1.2p1_0303F.1_g119030 Hydrangea macrophylla HOM05D004742 ORTHO05D005677 7.3e-23 111.7 246 44.3
Lsat_1_v5_gn_6_421 Lactuca sativa HOM05D004742 ORTHO05D005677 7.3e-23 111.7 228 35.5
Psat2g136480 Pisum sativum HOM05D004742 ORTHO05D005677 7.3e-23 111.7 112 53.6
Nitab4.5_0000529g0010 Nicotiana tabacum HOM05D004742 ORTHO05D005677 9.5e-23 111.3 245 33.9
Thecc.03G226400 Theobroma cacao HOM05D004742 ORTHO05D005677 9.5e-23 111.3 239 34.7
Lalb_Chr16g0381321 Lupinus albus HOM05D004742 ORTHO05D005677 1.6e-22 110.5 103 53.4
Solyc08g076870.1 Solanum lycopersicum HOM05D004742 ORTHO05D005677 2.1e-22 110.2 264 33.3
Sopen08g025400 Solanum pennellii HOM05D004742 ORTHO05D005677 2.1e-22 110.2 262 33.2
MSTRG.12162 Avicennia marina HOM05D004742 ORTHO05D005677 3.6e-22 109.4 221 35.3
Manes.15G188900 Manihot esculenta HOM05D004742 ORTHO05D005677 3.6e-22 109.4 229 39.7
SGA_v2.0_scaffold6G03142 Striga asiatica HOM05D004742 ORTHO05D005677 3.6e-22 109.4 219 38.4
Sabra03G0062000 Salix brachista HOM05D004742 ORTHO05D001134 4.7e-22 109.0 226 38.5
HanXRQChr17g0536221 Helianthus annuus HOM05D004742 ORTHO05D005677 1.4e-21 107.5 233 37.8
Oeu006253.1 Olea europaea HOM05D004742 ORTHO05D005677 2.3e-21 106.7 236 35.2
SalBow6G3311 Salvia bowleyana HOM05D004742 ORTHO05D005677 3.1e-21 106.3 224 35.3
TAR636G0473 Trochodendron aralioides HOM05D004742 ORTHO05D005677 3.1e-21 106.3 227 38.8
RcHm_v2.0_Chr7g0209881 Rosa chinensis HOM05D004742 ORTHO05D005677 4.0e-21 105.9 236 34.7
Prupe.5G034500 Prunus persica HOM05D004742 ORTHO05D005677 5.2e-21 105.5 237 33.3
QL12p005003 Quercus lobata HOM05D004742 ORTHO05D005677 5.2e-21 105.5 233 36.1
CSS0044674 Camellia sinensis var. sinensis HOM05D004742 ORTHO05D005677 6.8e-21 105.1 120 49.2
CANSAT21G2184 Cannabis sativa HOM05D004742 ORTHO05D005677 6.8e-21 105.1 223 34.5
ClCG10G001520 Citrullus lanatus HOM05D004742 ORTHO05D005677 1.2e-20 104.4 235 34.9
Actinidia03372 Actinidia chinensis HOM05D004742 ORTHO05D005677 1.5e-20 104.0 259 35.1
Cfa012451 Carpinus fangiana HOM05D004742 ORTHO05D005677 1.5e-20 104.0 130 48.5
Gohir.A11G030800 Gossypium hirsutum HOM05D004742 ORTHO05D005677 2.0e-20 103.6 225 34.7
Rhsim11G0016100 Rhododendron simsii HOM05D004742 ORTHO05D005677 2.0e-20 103.6 114 50.0
HanXRQChr06g0167541 Helianthus annuus HOM05D004742 ORTHO05D005677 3.4e-20 102.8 221 37.6
Gohir.D08G176700 Gossypium hirsutum HOM05D004742 ORTHO05D005677 4.4e-20 102.4 107 50.5
Gorai.004G184600 Gossypium raimondii HOM05D004742 ORTHO05D005677 4.4e-20 102.4 107 50.5
Hma1.2p1_0574F.1_g181490 Hydrangea macrophylla HOM05D004742 ORTHO05D005677 4.4e-20 102.4 96 57.3
PGR031G2228 Punica granatum HOM05D004742 ORTHO05D005677 4.4e-20 102.4 251 34.3
CSS0004262 Camellia sinensis var. sinensis HOM05D004742 ORTHO05D005677 7.5e-20 101.7 243 34.2
Actinidia25968 Actinidia chinensis HOM05D004742 ORTHO05D005677 9.8e-20 101.3 245 35.9
Haze_08216 Corylus avellana HOM05D004742 ORTHO05D005677 1.3e-19 100.9 124 47.6
CsaV3_3G001600 Cucumis sativus L. HOM05D004742 ORTHO05D005677 1.3e-19 100.9 236 35.6
Gorai.007G032300 Gossypium raimondii HOM05D004742 ORTHO05D005677 1.3e-19 100.9 227 37.9
Potri.003G092700 Populus trichocarpa HOM05D004742 ORTHO05D005677 1.3e-19 100.9 220 38.6
COL.COLO4_17015 Corchorus olitorius HOM05D004742 ORTHO05D005677 2.2e-19 100.1 237 36.7
Duzib084G1225 Durio zibethinus HOM05D004742 ORTHO05D005677 3.7e-19 99.4 219 32.4
MD06G1035300 Malus domestica HOM05D004742 ORTHO05D005677 3.7e-19 99.4 99 52.5
Potri.001G141600 Populus trichocarpa HOM05D004742 ORTHO05D005677 3.7e-19 99.4 235 38.3
Gohir.A08G156100 Gossypium hirsutum HOM05D004742 ORTHO05D005677 4.9e-19 99.0 222 35.1
Nn1g00114 Nelumbo nucifera HOM05D004742 ORTHO05D005677 4.9e-19 99.0 239 32.2
SGA_v2.0_scaffold20G09271 Striga asiatica HOM05D004742 ORTHO05D005677 6.4e-19 98.6 220 35.9
Eucgr.D02205 Eucalyptus grandis HOM05D004742 ORTHO05D005677 8.3e-19 98.2 234 31.2
CiPaw.11G094200 Carya illinoinensis HOM05D004742 ORTHO05D005677 1.1e-18 97.8 112 48.2
Ah.12g055130 Amaranthus hybridus HOM05D004742 ORTHO05D005677 1.4e-18 97.4 226 33.2
CSS0028083 Camellia sinensis var. sinensis HOM05D004742 ORTHO05D005677 1.9e-18 97.1 243 33.3
Gohir.A09G199100 Gossypium hirsutum HOM05D004742 ORTHO05D005677 1.9e-18 97.1 231 33.3
DCAR_032208 Daucus carota HOM05D004742 ORTHO05D005677 3.2e-18 96.3 213 35.7
Duzib084G0476 Durio zibethinus HOM05D004742 ORTHO05D005677 5.4e-18 95.5 219 31.5
MELO3C027362.2 Cucumis melo HOM05D004742 ORTHO05D005677 7.1e-18 95.1 235 34.9
Gohir.D11G029500 Gossypium hirsutum HOM05D004742 ORTHO05D005677 7.1e-18 95.1 225 36.4
Rhsim07G0128300 Rhododendron simsii HOM05D004742 ORTHO05D005677 7.1e-18 95.1 227 36.6
Cc08_g02870 Coffea canephora HOM05D004742 ORTHO05D005677 9.2e-18 94.7 245 40.0
TAR629G2541 Trochodendron aralioides HOM05D004742 ORTHO05D005677 9.2e-18 94.7 123 46.3
Atru.chr6.1683 Acer truncatum HOM05D004742 ORTHO05D005677 1.2e-17 94.4 232 37.1
EL10Ac5g12097 Beta vulgaris HOM05D004742 ORTHO05D005677 1.2e-17 94.4 218 37.2
Ciclev10016629m.g Citrus clementina HOM05D004742 ORTHO05D005677 1.2e-17 94.4 237 37.6
Lj2g0023551 Lotus japonicus HOM05D004742 ORTHO05D005677 1.2e-17 94.4 218 35.8
Duzib068G0638 Durio zibethinus HOM05D004742 ORTHO05D005677 1.6e-17 94.0 238 31.1
EL10Ac5g12098 Beta vulgaris HOM05D004742 ORTHO05D005677 3.5e-17 92.8 213 32.9
MD16G1273500 Malus domestica HOM05D004742 ORTHO05D005677 3.5e-17 92.8 235 34.5
HanXRQChr12g0360911 Helianthus annuus HOM05D004742 ORTHO05D005677 6.6e-16 88.6 218 33.0
ECA233G6051 Erigeron canadensis HOM05D007880 ORTHO05D003386 1.1e-15 87.8 123 43.1
Nitab4.5_0008566g0010 Nicotiana tabacum HOM05D004742 ORTHO05D005677 1.1e-15 87.8 216 33.3
Lj3A410T15 Lonicera japonica HOM05D004742 ORTHO05D005677 3.3e-15 86.3 104 50.0
TAR374G0395 Trochodendron aralioides HOM05D004742 ORTHO05D005677 1.2e-14 84.3 108 46.3
Gorai.006G216900 Gossypium raimondii HOM05D004742 ORTHO05D005677 1.6e-14 84.0 232 30.6
Gohir.D09G193400 Gossypium hirsutum HOM05D004742 ORTHO05D005677 2.1e-14 83.6 232 31.0
Nitab4.5_0006434g0030 Nicotiana tabacum HOM05D004742 ORTHO05D005677 2.8e-14 83.2 119 42.0
PGSC0003DMG400017843 Solanum tuberosum HOM05D004742 ORTHO05D005677 6.2e-14 82.0 93 48.4
PSO210G7694 Papaver somniferum HOM05D004742 ORTHO05D005677 1.1e-13 81.3 103 48.5
Solyc08g005090.2 Solanum lycopersicum HOM05D004742 ORTHO05D005677 4.0e-13 79.3 93 47.3
Sopen08g001110 Solanum pennellii HOM05D004742 ORTHO05D005677 4.0e-13 79.3 93 47.3
THA.LOC104814447 Tarenaya hassleriana HOM05D004742 ORTHO05D005677 5.2e-13 79.0 243 28.8
Sed0001883 Sechium edule HOM05D004742 ORTHO05D005677 2.2e-11 73.6 239 32.2
Peaxi162Scf00045g00023 Petunia axillaris HOM05D004742 ORTHO05D005677 3.8e-11 72.8 94 43.6
AUR62018706 Chenopodium quinoa HOM05D004742 ORTHO05D005677 1.1e-10 71.2 89 44.9
Aa31LG9G15210 Aethionema arabicum HOM05D004742 ORTHO05D005677 3.5e-09 66.2 247 30.0
Aqoxy3G02336 Aquilegia oxysepala HOM05D004742 ORTHO05D005677 4.6e-09 65.9 240 30.4
BcaC01g01725 Brassica carinata HOM05D004742 ORTHO05D005677 6.0e-09 65.5 103 39.8
C03p72460 Brassica napus HOM05D004742 ORTHO05D005677 6.0e-09 65.5 103 39.8
Thhalv10017262m.g Eutrema salsugineum HOM05D004742 ORTHO05D005677 7.8e-09 65.1 214 28.0
MBI04_g46668_MAGBIO Magnolia biondii HOM05D004742 ORTHO05D005677 7.8e-09 65.1 85 45.9
THA.LOC104812742 Tarenaya hassleriana HOM05D004742 ORTHO05D005677 7.8e-09 65.1 238 26.9
Sp1g28270 Schrenkiella parvula HOM05D004742 ORTHO05D005677 1.0e-08 64.7 240 28.8
BolC3t19547H Brassica oleracea HOM05D004742 ORTHO05D005677 1.7e-08 63.9 103 38.8
HPP92_020967 Vanilla planifolia HOM05D004742 ORTHO05D005677 1.7e-08 63.9 105 41.0
BcaB03g13715 Brassica carinata HOM05D004742 ORTHO05D005677 2.3e-08 63.5 103 36.9
BcaC05g27832 Brassica carinata HOM05D004742 ORTHO05D005677 2.3e-08 63.5 103 39.8
C05p38300 Brassica napus HOM05D004742 ORTHO05D005677 2.3e-08 63.5 103 39.8
BolC5t32562H Brassica oleracea HOM05D004742 ORTHO05D005677 2.3e-08 63.5 103 39.8
Thhalv10008795m.g Eutrema salsugineum HOM05D004742 ORTHO05D005677 5.1e-08 62.4 240 29.6
Sp4g17420 Schrenkiella parvula HOM05D004742 ORTHO05D005677 2.5e-07 60.1 105 37.1
BcaC02g11593 Brassica carinata HOM05D004742 ORTHO05D005677 3.6e-06 56.2 189 30.2
CARHR032080 Cardamine hirsuta HOM05D004742 ORTHO05D005677 4.7e-06 55.8 240 27.9
C04p13600 Brassica napus HOM05D004742 ORTHO05D005677 8.1e-06 55.1 190 30.0
BolC4t22951H Brassica oleracea HOM05D004742 ORTHO05D005677 8.1e-06 55.1 190 30.0


User provided reference genes

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