Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_004289 Daucus carota HOM05D006023 ORTHO05D007377 1.7e-106 389.4 202 100.0
Dinv28972 Davidia involucrata HOM05D006023 ORTHO05D007377 1.5e-62 243.4 209 65.1
Hma1.2p1_1379F.1_g279210 Hydrangea macrophylla HOM05D006023 ORTHO05D007377 3.3e-62 242.3 212 63.7
Actinidia14795 Actinidia chinensis HOM05D006023 ORTHO05D007377 7.3e-62 241.1 198 64.6
CSS0050040 Camellia sinensis var. sinensis HOM05D006023 ORTHO05D007377 9.5e-62 240.7 198 66.2
Lj2A236G57 Lonicera japonica HOM05D006023 ORTHO05D007377 8.0e-61 237.7 209 64.1
Nn5g27684 Nelumbo nucifera HOM05D006023 ORTHO05D007377 1.8e-60 236.5 203 62.6
Sc01g0007360 Simmondsia chinensis HOM05D006023 ORTHO05D007377 1.5e-59 233.4 220 62.3
Oeu006244.1 Olea europaea HOM05D006023 ORTHO05D007377 2.0e-59 233.0 198 65.2
Manes.02G087300 Manihot esculenta HOM05D006023 ORTHO05D007377 3.4e-59 232.3 197 64.5
TWI81G0073 Tripterygium wilfordii HOM05D006023 ORTHO05D007377 9.8e-59 230.7 199 64.8
TAR375G0242 Trochodendron aralioides HOM05D006023 ORTHO05D007377 1.3e-58 230.3 199 63.8
arahy.Tifrunner.gnm1.ann1.NMD1RU Arachis hypogaea HOM05D006023 ORTHO05D007377 2.2e-58 229.6 207 61.8
CiPaw.12G065700 Carya illinoinensis HOM05D006023 ORTHO05D007377 2.9e-58 229.2 197 65.0
Peaxi162Scf00184g00013 Petunia axillaris HOM05D006023 ORTHO05D007377 3.7e-58 228.8 210 61.9
Migut.F00744 Erythranthe guttata HOM05D006023 ORTHO05D007377 6.4e-58 228.0 214 62.1
Eucgr.D02210 Eucalyptus grandis HOM05D006023 ORTHO05D007377 6.4e-58 228.0 205 62.4
Hma1.2p1_0303F.1_g118960 Hydrangea macrophylla HOM05D006023 ORTHO05D007377 6.4e-58 228.0 198 62.1
Lsat_1_v5_gn_6_80341 Lactuca sativa HOM05D006023 ORTHO05D007377 6.4e-58 228.0 199 63.8
arahy.Tifrunner.gnm1.ann1.T01SKW Arachis hypogaea HOM05D006023 ORTHO05D007377 8.3e-58 227.6 207 61.4
SGA_v2.0_scaffold6G03147 Striga asiatica HOM05D006023 ORTHO05D007377 8.3e-58 227.6 213 62.0
GSVIVG01013134001 Vitis vinifera HOM05D006023 ORTHO05D007377 8.3e-58 227.6 203 61.1
ECA240G0359 Erigeron canadensis HOM05D006023 ORTHO05D007377 1.4e-57 226.9 199 61.8
PGSC0003DMG400027709 Solanum tuberosum HOM05D006023 ORTHO05D007377 1.4e-57 226.9 204 61.3
arahy.Tifrunner.gnm1.ann1.7BP5M1 Arachis hypogaea HOM05D006023 ORTHO05D007377 1.9e-57 226.5 207 61.4
Lalb_Chr17g0341511 Lupinus albus HOM05D006023 ORTHO05D007377 1.9e-57 226.5 206 61.7
Hund11133 Selenicereus undatus HOM05D006023 ORTHO05D007377 1.9e-57 226.5 203 62.6
RcHm_v2.0_Chr7g0210231 Rosa chinensis HOM05D006023 ORTHO05D007377 2.4e-57 226.1 207 60.4
Glyma.10G212800 Glycine max HOM05D006023 ORTHO05D007377 3.2e-57 225.7 208 60.6
Actinidia09185 Actinidia chinensis HOM05D006023 ORTHO05D007377 5.4e-57 224.9 198 64.1
Cfa012466 Carpinus fangiana HOM05D006023 ORTHO05D007377 5.4e-57 224.9 197 61.9
Potri.003G093800 Populus trichocarpa HOM05D006023 ORTHO05D007377 5.4e-57 224.9 199 63.3
FAN08G2226 Fragaria x ananassa HOM05D006023 ORTHO05D007377 9.2e-57 224.2 207 60.4
Prupe.5G032500 Prunus persica HOM05D006023 ORTHO05D007377 1.2e-56 223.8 205 59.5
FvH4_5g22440 Fragaria vesca HOM05D006023 ORTHO05D007377 3.5e-56 222.2 207 59.9
Rhsim07G0128700 Rhododendron simsii HOM05D006023 ORTHO05D007377 3.5e-56 222.2 234 56.4
Glyma.20G178200 Glycine max HOM05D006023 ORTHO05D007377 4.6e-56 221.9 208 59.6
CsaV3_6G000520 Cucumis sativus L. HOM05D006023 ORTHO05D007377 6.0e-56 221.5 198 62.1
Lj5g0000896 Lotus japonicus HOM05D006023 ORTHO05D007377 6.0e-56 221.5 217 57.6
FAN04G1629 Fragaria x ananassa HOM05D006023 ORTHO05D007377 7.8e-56 221.1 201 59.2
Ca_10583_v3 Cicer arietinum L. HOM05D006023 ORTHO05D007377 1.0e-55 220.7 207 59.4
Cc08_g03000 Coffea canephora HOM05D006023 ORTHO05D007377 1.0e-55 220.7 197 62.9
FAN18G1789 Fragaria x ananassa HOM05D006023 ORTHO05D007377 1.0e-55 220.7 207 59.4
Nitab4.5_0004555g0010 Nicotiana tabacum HOM05D006023 ORTHO05D007377 1.0e-55 220.7 201 61.7
Medtr1g095620 Medicago truncatula HOM05D006023 ORTHO05D007377 1.3e-55 220.3 206 59.7
TPR.G1759 Trifolium pratense HOM05D006023 ORTHO05D007377 1.3e-55 220.3 213 56.8
FAN13G0319 Fragaria x ananassa HOM05D006023 ORTHO05D007377 1.7e-55 219.9 207 59.4
RcHm_v2.0_Chr7g0210201 Rosa chinensis HOM05D006023 ORTHO05D007377 1.7e-55 219.9 197 61.4
BcaB05g21996 Brassica carinata HOM05D006023 ORTHO05D007377 2.3e-55 219.5 212 58.0
MELO3C021213.2 Cucumis melo HOM05D006023 ORTHO05D007377 2.3e-55 219.5 197 61.4
Nitab4.5_0002808g0010 Nicotiana tabacum HOM05D006023 ORTHO05D007377 3.0e-55 219.2 186 64.0
Sopen08g025290 Solanum pennellii HOM05D006023 ORTHO05D007377 3.9e-55 218.8 200 60.0
Carub.0008s1318 Capsella rubella HOM05D006023 ORTHO05D007377 5.1e-55 218.4 215 57.7
VMungo0720G0064 Vigna mungo HOM05D005934 ORTHO05D005165 6.6e-55 218.0 209 59.8
BraA02t06203Z Brassica rapa HOM05D006023 ORTHO05D007377 8.6e-55 217.6 209 58.9
Thhalv10014686m.g Eutrema salsugineum HOM05D006023 ORTHO05D007377 8.6e-55 217.6 209 58.9
Sp6g15140 Schrenkiella parvula HOM05D006023 ORTHO05D007377 8.6e-55 217.6 208 59.6
AL8G27520 Arabidopsis lyrata HOM05D006023 ORTHO05D007377 1.1e-54 217.2 213 59.6
Ah.07g200580 Amaranthus hybridus HOM05D006023 ORTHO05D007377 1.5e-54 216.9 198 60.6
A02p11390 Brassica napus HOM05D006023 ORTHO05D007377 1.5e-54 216.9 211 57.8
Sopen10g027320 Solanum pennellii HOM05D006023 ORTHO05D007377 1.5e-54 216.9 201 59.7
C02p18900 Brassica napus HOM05D006023 ORTHO05D007377 2.5e-54 216.1 212 57.5
C09p42690 Brassica napus HOM05D006023 ORTHO05D007377 2.5e-54 216.1 186 62.4
BolC2t08031H Brassica oleracea HOM05D006023 ORTHO05D007377 2.5e-54 216.1 212 57.5
BolC9t57145H Brassica oleracea HOM05D006023 ORTHO05D007377 2.5e-54 216.1 186 62.4
A10p10460 Brassica napus HOM05D006023 ORTHO05D007377 3.3e-54 215.7 211 57.8
Aqoxy4G02643 Aquilegia oxysepala HOM05D006023 ORTHO05D007377 7.3e-54 214.5 197 58.9
AT5G52980 Arabidopsis thaliana HOM05D006023 ORTHO05D007377 1.2e-53 213.8 186 63.4
BraA10t43129Z Brassica rapa HOM05D006023 ORTHO05D007377 1.2e-53 213.8 186 61.8
Sed0006289 Sechium edule HOM05D006023 ORTHO05D007377 1.2e-53 213.8 201 60.2
Phvul.007G092700 Phaseolus vulgaris HOM05D006023 ORTHO05D007377 1.6e-53 213.4 207 58.5
AL8G27580 Arabidopsis lyrata HOM05D006023 ORTHO05D007377 6.2e-53 211.5 210 57.6
Gohir.D08G176200 Gossypium hirsutum HOM05D006023 ORTHO05D007377 6.2e-53 211.5 205 58.0
Gorai.004G184000 Gossypium raimondii HOM05D006023 ORTHO05D007377 6.2e-53 211.5 205 58.0
EL10Ac5g12082 Beta vulgaris HOM05D006023 ORTHO05D007377 8.1e-53 211.1 201 61.2
CANSAT21G1027 Cannabis sativa HOM05D006023 ORTHO05D007377 8.1e-53 211.1 197 58.4
CARHR265970 Cardamine hirsuta HOM05D006023 ORTHO05D007377 1.4e-52 210.3 208 57.7
Gohir.A06G181300 Gossypium hirsutum HOM05D006023 ORTHO05D007377 1.4e-52 210.3 205 56.6
Gohir.A08G155600 Gossypium hirsutum HOM05D006023 ORTHO05D007377 1.8e-52 209.9 205 57.1
Gohir.D06G188100 Gossypium hirsutum HOM05D006023 ORTHO05D007377 1.8e-52 209.9 200 59.0
BcaC03g14468 Brassica carinata HOM05D006023 ORTHO05D007377 4.0e-52 208.8 211 56.9
Psat6g182880 Pisum sativum HOM05D006023 ORTHO05D007377 4.0e-52 208.8 161 66.5
Gorai.010G220500 Gossypium raimondii HOM05D006023 ORTHO05D007377 5.2e-52 208.4 201 58.7
THA.LOC104806716 Tarenaya hassleriana HOM05D006023 ORTHO05D007377 5.2e-52 208.4 199 56.3
Aa31LG3G9490 Aethionema arabicum HOM05D006023 ORTHO05D007377 1.2e-51 207.2 197 58.9
Thecc.08G177100 Theobroma cacao HOM05D006023 ORTHO05D007377 2.6e-51 206.1 203 56.7
SGA_v2.0_scaffold196G40921 Striga asiatica HOM05D006023 ORTHO05D007377 3.4e-51 205.7 192 61.5
Atru.chr6.1650 Acer truncatum HOM05D006023 ORTHO05D007377 5.8e-51 204.9 205 57.1
unitig_21.g20896 Utricularia gibba HOM05D006023 ORTHO05D007377 5.8e-51 204.9 216 52.8
Cpa.g.c32853 Carica papaya HOM05D006023 ORTHO05D007377 9.9e-51 204.1 197 59.9
COL.COLO4_16998 Corchorus olitorius HOM05D006023 ORTHO05D007377 1.7e-50 203.4 198 60.6
MBI04_g41609_MAGBIO Magnolia biondii HOM05D006023 ORTHO05D007377 1.9e-49 199.9 198 56.6
PGR031G2123 Punica granatum HOM05D006023 ORTHO05D007377 4.1e-49 198.7 197 57.4
CAN.G298.27 Capsicum annuum HOM05D006023 ORTHO05D007377 1.2e-48 197.2 142 74.6
PSO782G2387 Papaver somniferum HOM05D006023 ORTHO05D007377 2.7e-48 196.1 195 55.4
Hma1.2p1_0574F.1_g181560 Hydrangea macrophylla HOM05D006023 ORTHO05D007377 4.6e-48 195.3 169 63.9
Hma1.2p1_1379F.1_g279205 Hydrangea macrophylla HOM05D006023 ORTHO05D007377 4.6e-48 195.3 169 63.9
MD06G1036800 Malus domestica HOM05D006023 ORTHO05D007377 4.6e-48 195.3 197 57.9
PSO675G2981 Papaver somniferum HOM05D006023 ORTHO05D007377 1.7e-47 193.4 188 54.8
AL4G21070 Arabidopsis lyrata HOM05D006023 ORTHO05D007377 6.6e-47 191.4 192 57.3
HPP92_020908 Vanilla planifolia HOM05D006023 ORTHO05D007377 6.6e-47 191.4 198 53.5
ATR0665G562 Amborella trichopoda HOM05D006023 ORTHO05D007377 1.5e-46 190.3 160 63.8
PSO541G2859 Papaver somniferum HOM05D006023 ORTHO05D007377 1.4e-44 183.7 172 56.4
vmacro14181 Vaccinium macrocarpon HOM05D006023 ORTHO05D007377 1.8e-44 183.3 361 37.7
HanXRQChr13g0414191 Helianthus annuus HOM05D006023 ORTHO05D007377 1.4e-41 173.7 155 59.4
Ciclev10022247m.g Citrus clementina HOM05D006023 ORTHO05D007377 4.3e-38 162.2 157 56.7
CDE06G2650 Ceratophyllum demersum HOM05D006023 ORTHO05D007377 7.3e-38 161.4 150 60.7
MSTRG.15799 Avicennia marina HOM05D006023 ORTHO05D007377 1.3e-37 160.6 118 71.2
AUR62018698 Chenopodium quinoa HOM05D006023 ORTHO05D007377 2.4e-36 156.4 123 70.7
Mapoly0102s0011 Marchantia polymorpha HOM05D006023 ORTHO05D007377 7.6e-35 151.4 179 49.2
Zm00001eb024850 Zea mays HOM05D006023 ORTHO05D007377 1.7e-34 150.2 161 52.2
Duzib068G1405 Durio zibethinus HOM05D006023 ORTHO05D007377 5.4e-33 145.2 121 63.6
Pp3c18_16040 Physcomitrium patens HOM05D006023 ORTHO05D007377 5.1e-31 138.7 185 44.9
Solyc08g076770.4 Solanum lycopersicum HOM05D006023 ORTHO05D007377 5.1e-31 138.7 129 57.4
PGSC0003DMG400017522 Solanum tuberosum HOM05D006023 ORTHO05D007377 1.5e-30 137.1 129 57.4
CBR_g88177 Chara braunii HOM05D006023 ORTHO05D007377 3.3e-30 136.0 120 58.3
PSO063G6826 Papaver somniferum HOM05D006023 ORTHO05D007377 5.6e-30 135.2 109 64.2
AagrBONN_evm.TU.Sc2ySwM_228.1949 Anthoceros agrestis HOM05D006023 ORTHO05D007377 9.3e-25 117.9 136 48.5
SMO143G0066 Selaginella moellendorffii HOM05D006023 ORTHO05D007377 1.6e-21 107.1 150 39.3
FAN18G1032 Fragaria x ananassa HOM05D006023 ORTHO05D007377 1.8e-20 103.6 135 45.9
Dinv25231 Davidia involucrata HOM05D006023 ORTHO05D007377 4.0e-20 102.4 68 77.9
FAN18G2414 Fragaria x ananassa HOM05D006023 ORTHO05D007377 4.0e-20 102.4 74 74.3
ClCG06G003760 Citrullus lanatus HOM05D006023 ORTHO05D007377 9.0e-20 101.3 109 53.2
SEGI_27853 Sequoiadendron giganteum HOM05D006023 ORTHO05D007377 2.6e-19 99.8 133 44.4
AUR62007305 Chenopodium quinoa HOM05D006023 ORTHO05D007377 1.0e-15 87.8 75 64.0
Solyc08g076740.4 Solanum lycopersicum HOM05D006023 ORTHO05D007377 1.3e-15 87.4 73 64.4
MD16G1272600 Malus domestica HOM05D006023 ORTHO05D007377 4.3e-14 82.4 48 85.4
SEGI_36898 Sequoiadendron giganteum HOM05D006023 ORTHO05D007377 3.7e-13 79.3 59 69.5
Cre10.g438750 Chlamydomonas reinhardtii HOM05D006023 ORTHO05D007377 2.4e-12 76.6 183 32.2
Solyc10g074822.1 Solanum lycopersicum HOM05D006023 ORTHO05D007377 2.6e-11 73.2 47 78.7
BcaNung06895 Brassica carinata HOM05D006023 ORTHO05D007377 1.6e-08 63.9 97 39.2


User provided reference genes

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