Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_004257 Daucus carota HOM05D000013 ORTHO05D025245 3.8e-108 394.8 195 100.0
Migut.A00581 Erythranthe guttata HOM05D000013 ORTHO05D000011 5.4e-30 135.2 189 39.2
DCAR_008195 Daucus carota HOM05D000013 ORTHO05D000011 1.0e-28 131.0 144 47.2
Oeu031074.1 Olea europaea HOM05D000013 ORTHO05D000011 4.3e-27 125.6 186 37.6
CSS0047657 Camellia sinensis var. sinensis HOM05D000013 ORTHO05D000011 2.8e-26 122.9 139 45.3
SGA_v2.0_scaffold89G27422 Striga asiatica HOM05D000013 ORTHO05D000011 2.0e-24 116.7 187 36.9
Migut.A00580 Erythranthe guttata HOM05D000013 ORTHO05D000011 6.4e-23 111.7 132 40.9
Oeu010659.1 Olea europaea HOM05D000013 ORTHO05D025245 1.1e-22 110.9 155 38.1
Oeu039519.1 Olea europaea HOM05D000013 ORTHO05D000011 9.3e-22 107.8 145 40.0
Oeu016912.1 Olea europaea HOM05D000013 ORTHO05D000011 1.6e-21 107.1 138 42.8
Oeu039524.1 Olea europaea HOM05D000013 ORTHO05D000011 4.6e-21 105.5 184 38.0
Sabra16G0298300 Salix brachista HOM05D000013 ORTHO05D000011 1.0e-20 104.4 184 34.2
Sabra16G0300300 Salix brachista HOM05D000013 ORTHO05D000011 1.0e-20 104.4 184 34.2
Migut.A00582 Erythranthe guttata HOM05D000013 ORTHO05D000011 3.9e-20 102.4 145 41.4
Potri.001G441400 Populus trichocarpa HOM05D000013 ORTHO05D000011 8.7e-20 101.3 179 33.5
Oeu039516.1 Olea europaea HOM05D000013 ORTHO05D025245 1.3e-18 97.4 81 51.9
Sabra16G0300400 Salix brachista HOM05D000013 ORTHO05D000011 3.7e-18 95.9 178 31.5
Sabra16G0298500 Salix brachista HOM05D000013 ORTHO05D000011 1.1e-17 94.4 184 32.1
Prupe.4G135100 Prunus persica HOM05D000013 ORTHO05D000011 1.8e-17 93.6 122 41.8
RcHm_v2.0_Chr5g0024901 Rosa chinensis HOM05D000013 ORTHO05D000011 1.8e-17 93.6 143 41.3
RcHm_v2.0_Chr5g0024871 Rosa chinensis HOM05D000013 ORTHO05D000011 2.4e-17 93.2 145 41.4
RcHm_v2.0_Chr5g0024921 Rosa chinensis HOM05D000013 ORTHO05D000011 2.4e-17 93.2 124 41.9
RcHm_v2.0_Chr5g0024951 Rosa chinensis HOM05D000013 ORTHO05D000011 2.4e-17 93.2 143 40.6
Sabra16G0300600 Salix brachista HOM05D000013 ORTHO05D000011 2.4e-17 93.2 184 31.5
FAN21G4017 Fragaria x ananassa HOM05D000013 ORTHO05D000011 1.5e-16 90.5 122 43.4
CSS0010090 Camellia sinensis var. sinensis HOM05D000013 ORTHO05D000011 2.0e-16 90.1 146 35.6
FAN16G1341 Fragaria x ananassa HOM05D000013 ORTHO05D000011 2.6e-16 89.7 122 42.6
FvH4_3g15080 Fragaria vesca HOM05D000013 ORTHO05D000011 3.4e-16 89.4 145 40.0
RcHm_v2.0_Chr4g0410521 Rosa chinensis HOM05D000013 ORTHO05D000011 3.4e-16 89.4 119 41.2
MD10G1207500 Malus domestica HOM05D000013 ORTHO05D000011 4.5e-16 89.0 158 36.1
FvH4_3g15091 Fragaria vesca HOM05D000013 ORTHO05D015669 7.6e-16 88.2 110 43.6
FAN11G1270 Fragaria x ananassa HOM05D000013 ORTHO05D000011 7.6e-16 88.2 122 42.6
RcHm_v2.0_Chr5g0025051 Rosa chinensis HOM05D000013 ORTHO05D000011 7.6e-16 88.2 118 39.8
Potri.001G441180 Populus trichocarpa HOM05D000013 ORTHO05D000011 1.7e-15 87.0 173 32.4
Oeu001877.3 Olea europaea HOM05D000013 ORTHO05D000011 2.9e-15 86.3 179 31.8
RcHm_v2.0_Chr5g0024831 Rosa chinensis HOM05D000013 ORTHO05D000011 8.4e-15 84.7 125 43.2
RcHm_v2.0_Chr5g0024971 Rosa chinensis HOM05D000013 ORTHO05D000011 8.4e-15 84.7 125 40.8
Manes.06G101050 Manihot esculenta HOM05D000013 ORTHO05D000011 1.1e-14 84.3 126 38.1
FAN11G3251 Fragaria x ananassa HOM05D000013 ORTHO05D000011 1.4e-14 84.0 125 41.6
Lalb_Chr19g0133251 Lupinus albus HOM05D000013 ORTHO05D000011 2.4e-14 83.2 116 37.9
RcHm_v2.0_Chr5g0025201 Rosa chinensis HOM05D000013 ORTHO05D000011 4.2e-14 82.4 121 38.0
FAN25G0249 Fragaria x ananassa HOM05D000013 ORTHO05D000011 5.5e-14 82.0 134 35.1
QL04p083101 Quercus lobata HOM05D000013 ORTHO05D000011 7.1e-14 81.6 128 34.4
RcHm_v2.0_Chr5g0025031 Rosa chinensis HOM05D000013 ORTHO05D000011 7.1e-14 81.6 147 35.4
FAN16G3392 Fragaria x ananassa HOM05D000013 ORTHO05D000011 9.3e-14 81.3 125 40.8
Lalb_Chr03g0031821 Lupinus albus HOM05D000013 ORTHO05D000011 9.3e-14 81.3 116 37.9
Oeu039518.1 Olea europaea HOM05D000013 ORTHO05D000011 9.3e-14 81.3 120 35.8
Phvul.011G176700 Phaseolus vulgaris HOM05D000013 ORTHO05D000011 2.1e-13 80.1 140 34.3
Psat5g260440 Pisum sativum HOM05D000013 ORTHO05D000011 2.1e-13 80.1 147 33.3
QL03p072076 Quercus lobata HOM05D000013 ORTHO05D000011 2.1e-13 80.1 146 32.9
FAN11G0510 Fragaria x ananassa HOM05D000013 ORTHO05D000011 2.7e-13 79.7 134 34.3
QL04p081038 Quercus lobata HOM05D000013 ORTHO05D000011 3.5e-13 79.3 121 35.5
ECA240G4080 Erigeron canadensis HOM05D000013 ORTHO05D000011 4.6e-13 79.0 168 29.8
Medtr8g052120 Medicago truncatula HOM05D000013 ORTHO05D000011 4.6e-13 79.0 111 35.1
FvH4_3g15090 Fragaria vesca HOM05D000013 ORTHO05D000011 6.0e-13 78.6 113 37.2
Medtr8g052190 Medicago truncatula HOM05D000013 ORTHO05D000011 6.0e-13 78.6 139 32.4
Potri.001G437875 Populus trichocarpa HOM05D000013 ORTHO05D000011 7.9e-13 78.2 113 35.4
MD10G1207800 Malus domestica HOM05D000013 ORTHO05D000011 1.0e-12 77.8 136 39.0
Medtr8g051600 Medicago truncatula HOM05D000013 ORTHO05D000011 1.0e-12 77.8 133 34.6
Hma1.2p1_1923F.1_g307670 Hydrangea macrophylla HOM05D000013 ORTHO05D000011 1.3e-12 77.4 93 44.1
MD10G1208000 Malus domestica HOM05D000013 ORTHO05D000011 1.8e-12 77.0 113 38.9
FAN21G3779 Fragaria x ananassa HOM05D000013 ORTHO05D000011 5.1e-12 75.5 110 37.3
Glyma.08G125800 Glycine max HOM05D000013 ORTHO05D000011 5.1e-12 75.5 117 36.8
QL06p010235 Quercus lobata HOM05D000013 ORTHO05D000011 8.7e-12 74.7 146 32.9
Lj3g0026218 Lotus japonicus HOM05D000013 ORTHO05D000011 1.1e-11 74.3 101 40.6
Lj3g0023687 Lotus japonicus HOM05D000013 ORTHO05D000011 1.5e-11 73.9 120 35.8
Medtr8g052420 Medicago truncatula HOM05D000013 ORTHO05D000011 1.5e-11 73.9 135 31.1
Prupe.4G134900 Prunus persica HOM05D000013 ORTHO05D000011 1.5e-11 73.9 118 34.7
Lj7C129T1 Lonicera japonica HOM05D000013 ORTHO05D000011 1.9e-11 73.6 112 34.8
Medtr1g081665 Medicago truncatula HOM05D000013 ORTHO05D000011 1.9e-11 73.6 133 34.6
QL04p082208 Quercus lobata HOM05D000013 ORTHO05D000011 1.9e-11 73.6 114 37.7
QL04p082006 Quercus lobata HOM05D000013 ORTHO05D000011 3.3e-11 72.8 133 31.6
Medtr8g051540 Medicago truncatula HOM05D000013 ORTHO05D000011 4.3e-11 72.4 142 31.7
Medtr8g051640 Medicago truncatula HOM05D000013 ORTHO05D000011 5.6e-11 72.0 146 33.6
QL06p010242 Quercus lobata HOM05D000013 ORTHO05D000011 7.4e-11 71.6 135 33.3
RcHm_v2.0_Chr5g0025041 Rosa chinensis HOM05D000013 ORTHO05D000011 7.4e-11 71.6 143 34.3
GSVIVG01038343001 Vitis vinifera HOM05D000013 ORTHO05D000011 7.4e-11 71.6 167 28.1
Dinv15832 Davidia involucrata HOM05D000013 ORTHO05D000011 1.6e-10 70.5 137 32.8
VMungo1127G1843 Vigna mungo HOM05D000013 ORTHO05D000011 2.1e-10 70.1 110 36.4
ECA240G3682 Erigeron canadensis HOM05D000013 ORTHO05D000011 2.8e-10 69.7 137 34.3
Medtr8g052200 Medicago truncatula HOM05D000013 ORTHO05D000011 2.8e-10 69.7 117 31.6
Medtr8g442370 Medicago truncatula HOM05D000013 ORTHO05D000011 3.7e-10 69.3 133 32.3
ECA240G2929 Erigeron canadensis HOM05D000321 ORTHO05D000204 4.8e-10 68.9 111 38.7
Medtr8g052060 Medicago truncatula HOM05D000013 ORTHO05D000011 4.8e-10 68.9 127 29.1
Medtr8g442290 Medicago truncatula HOM05D000013 ORTHO05D000011 4.8e-10 68.9 141 31.9
ECA240G1121 Erigeron canadensis HOM05D000013 ORTHO05D000011 6.2e-10 68.6 112 33.0
Medtr8g052600 Medicago truncatula HOM05D000013 ORTHO05D000011 6.2e-10 68.6 117 31.6
HanXRQChr03g0081601 Helianthus annuus HOM05D000013 ORTHO05D000011 8.2e-10 68.2 114 33.3
HanXRQChr13g0414041 Helianthus annuus HOM05D000013 ORTHO05D000011 8.2e-10 68.2 138 33.3
Medtr8g442340 Medicago truncatula HOM05D000013 ORTHO05D000011 1.1e-09 67.8 135 32.6
RcHm_v2.0_Chr5g0025211 Rosa chinensis HOM05D000013 ORTHO05D000011 1.1e-09 67.8 90 41.1
Medtr8g052513 Medicago truncatula HOM05D000013 ORTHO05D000011 1.4e-09 67.4 115 31.3
Lsat_1_v5_gn_6_73741 Lactuca sativa HOM05D000013 ORTHO05D000011 1.8e-09 67.0 112 34.8
Lj7A128T15 Lonicera japonica HOM05D000013 ORTHO05D000011 1.8e-09 67.0 129 32.6
Lj7A128T16 Lonicera japonica HOM05D000013 ORTHO05D000011 1.8e-09 67.0 129 32.6
Peaxi162Scf00408g00242 Petunia axillaris HOM05D000013 ORTHO05D000011 1.8e-09 67.0 118 33.1
Dinv06886 Davidia involucrata HOM05D000013 ORTHO05D000011 2.4e-09 66.6 133 36.1
Glyma.08G236900 Glycine max HOM05D000013 ORTHO05D000011 2.4e-09 66.6 130 32.3
Medtr8g052320 Medicago truncatula HOM05D000013 ORTHO05D000011 3.1e-09 66.2 108 33.3
ECA247G1082 Erigeron canadensis HOM05D000102 ORTHO05D000011 4.0e-09 65.9 127 33.9
HanXRQChr13g0404661 Helianthus annuus HOM05D000013 ORTHO05D000011 4.0e-09 65.9 113 36.3
Medtr8g052520 Medicago truncatula HOM05D000013 ORTHO05D000011 6.9e-09 65.1 120 30.8
Dinv06897 Davidia involucrata HOM05D000013 ORTHO05D000011 9.0e-09 64.7 141 33.3
HanXRQChr03g0081591 Helianthus annuus HOM05D000013 ORTHO05D000011 9.0e-09 64.7 134 32.8
HanXRQChr03g0081681 Helianthus annuus HOM05D000013 ORTHO05D000011 9.0e-09 64.7 113 32.7
HanXRQChr13g0412621 Helianthus annuus HOM05D000013 ORTHO05D000011 9.0e-09 64.7 136 33.8
Rhsim07G0135900 Rhododendron simsii HOM05D000013 ORTHO05D000011 9.0e-09 64.7 135 34.8
Psat4g119920 Pisum sativum HOM05D000013 ORTHO05D000011 1.2e-08 64.3 112 33.9
QL03p072489 Quercus lobata HOM05D000013 ORTHO05D000011 1.2e-08 64.3 149 28.9
VMungo1127G2128 Vigna mungo HOM05D000013 ORTHO05D000011 1.2e-08 64.3 136 29.4
GSVIVG01038347001 Vitis vinifera HOM05D000013 ORTHO05D000011 1.2e-08 64.3 129 29.5
Atru.chr2.1297 Acer truncatum HOM05D000013 ORTHO05D000011 1.5e-08 63.9 96 31.2
Medtr8g442270 Medicago truncatula HOM05D000013 ORTHO05D000011 1.5e-08 63.9 114 35.1
QL03p072090 Quercus lobata HOM05D000013 ORTHO05D000011 1.5e-08 63.9 149 28.9
ECA233G3943 Erigeron canadensis HOM05D002883 ORTHO05D003116 2.0e-08 63.5 91 42.9
ECA240G4640 Erigeron canadensis HOM05D000013 ORTHO05D000011 2.0e-08 63.5 133 33.1
ECA246G5062 Erigeron canadensis HOM05D000013 ORTHO05D000011 2.0e-08 63.5 138 28.3
Lsat_1_v5_gn_6_73701 Lactuca sativa HOM05D000013 ORTHO05D000011 2.0e-08 63.5 112 33.9
QL03p072466 Quercus lobata HOM05D000013 ORTHO05D000011 2.0e-08 63.5 149 28.9
Lsat_1_v5_gn_5_63420 Lactuca sativa HOM05D000013 ORTHO05D000011 2.6e-08 63.2 119 32.8
Lsat_1_v5_gn_5_63520 Lactuca sativa HOM05D000013 ORTHO05D000011 2.6e-08 63.2 112 32.1
CSS0002709 Camellia sinensis var. sinensis HOM05D000013 ORTHO05D000011 5.8e-08 62.0 127 33.1
Medtr8g442310 Medicago truncatula HOM05D000013 ORTHO05D000011 5.8e-08 62.0 118 30.5
TAR624G0775 Trochodendron aralioides HOM05D000013 ORTHO05D000011 5.8e-08 62.0 133 32.3
Glyma.15G213600 Glycine max HOM05D000013 ORTHO05D000011 1.0e-07 61.2 111 34.2
Lsat_1_v5_gn_6_73500 Lactuca sativa HOM05D000013 ORTHO05D000011 1.0e-07 61.2 121 33.1
Cc08_g04060 Coffea canephora HOM05D000013 ORTHO05D000011 1.3e-07 60.8 110 33.6
Dinv06894 Davidia involucrata HOM05D000013 ORTHO05D000011 1.7e-07 60.5 114 32.5
GSVIVG01038348001 Vitis vinifera HOM05D000013 ORTHO05D015669 1.7e-07 60.5 128 29.7
Lsat_1_v5_gn_5_63541 Lactuca sativa HOM05D000013 ORTHO05D000011 2.9e-07 59.7 144 30.6
Medtr8g052080 Medicago truncatula HOM05D000013 ORTHO05D000011 4.9e-07 58.9 125 28.0
Atru.chr2.1440 Acer truncatum HOM05D000013 ORTHO05D000011 6.5e-07 58.5 121 29.8
Lsat_1_v5_gn_5_63500 Lactuca sativa HOM05D000013 ORTHO05D000011 6.5e-07 58.5 112 31.2
RcHm_v2.0_Chr5g0024981 Rosa chinensis HOM05D000013 ORTHO05D000011 6.5e-07 58.5 124 29.8
Lj8A323T48 Lonicera japonica HOM05D000013 ORTHO05D015669 1.9e-06 57.0 174 28.7
Medtr8g052160 Medicago truncatula HOM05D000013 ORTHO05D000011 1.9e-06 57.0 112 33.0
Prupe.4G135400 Prunus persica HOM05D000013 ORTHO05D000011 1.9e-06 57.0 151 29.1
Lsat_1_v5_gn_6_73661 Lactuca sativa HOM05D000013 ORTHO05D010607 3.2e-06 56.2 70 40.0
ECA240G2521 Erigeron canadensis HOM05D000013 ORTHO05D000011 4.2e-06 55.8 65 40.0
HanXRQChr13g0411601 Helianthus annuus HOM05D000013 ORTHO05D000011 4.2e-06 55.8 138 28.3
Dinv06887 Davidia involucrata HOM05D000013 ORTHO05D000011 5.5e-06 55.5 95 33.7
Medtr8g052050 Medicago truncatula HOM05D000013 ORTHO05D000011 5.5e-06 55.5 129 28.7
ECA238G0167 Erigeron canadensis HOM05D000013 ORTHO05D000011 7.1e-06 55.1 104 32.7
HanXRQChr03g0081621 Helianthus annuus HOM05D000102 ORTHO05D000011 9.3e-06 54.7 97 30.9
Prupe.4G135500 Prunus persica HOM05D000013 ORTHO05D000011 9.3e-06 54.7 148 30.4


User provided reference genes

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