Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_004211 Daucus carota HOM05D007895 ORTHO05D010017 0.0e+00 1329.7 633 100.0
Dinv13880 Davidia involucrata HOM05D007895 ORTHO05D010017 2.8e-285 984.9 609 74.7
Hma1.2p1_0057F.1_g031900 Hydrangea macrophylla HOM05D007895 ORTHO05D010017 1.9e-281 972.2 636 70.0
Duzib235G1140 Durio zibethinus HOM05D007895 ORTHO05D010017 2.4e-281 971.8 634 70.2
TAR627G0668 Trochodendron aralioides HOM05D007895 ORTHO05D010017 7.1e-281 970.3 634 70.7
Potri.011G001800 Populus trichocarpa HOM05D007895 ORTHO05D010017 4.6e-280 967.6 634 70.5
Thecc.06G218400 Theobroma cacao HOM05D007895 ORTHO05D010017 2.3e-279 965.3 634 69.9
Gorai.009G177700 Gossypium raimondii HOM05D007895 ORTHO05D010017 6.7e-279 963.8 634 69.4
Gohir.D05G172500 Gossypium hirsutum HOM05D007895 ORTHO05D010017 2.5e-278 961.8 634 69.2
Gohir.A05G169300 Gossypium hirsutum HOM05D007895 ORTHO05D010017 1.8e-276 955.7 634 68.9
Cfa000239 Carpinus fangiana HOM05D007895 ORTHO05D010017 5.3e-276 954.1 633 69.4
Sabra11G0000700 Salix brachista HOM05D007895 ORTHO05D010017 9.0e-276 953.4 634 69.6
Oeu033195.1 Olea europaea HOM05D007895 ORTHO05D010017 4.5e-275 951.0 642 68.1
Prupe.4G023000 Prunus persica HOM05D007895 ORTHO05D010017 1.0e-274 949.9 634 68.6
MD10G1319500 Malus domestica HOM05D007895 ORTHO05D010017 7.1e-273 943.7 634 67.8
QL05p073549 Quercus lobata HOM05D007895 ORTHO05D010017 3.0e-271 938.3 633 68.2
QL05p073789 Quercus lobata HOM05D007895 ORTHO05D010017 3.0e-271 938.3 633 68.2
TWI63G1238 Tripterygium wilfordii HOM05D007895 ORTHO05D010017 6.7e-271 937.2 634 68.6
MD05G1343800 Malus domestica HOM05D007895 ORTHO05D010017 1.1e-270 936.4 634 67.5
Glyma.13G205700 Glycine max HOM05D007895 ORTHO05D010017 1.9e-270 935.6 635 67.9
Glyma.15G106800 Glycine max HOM05D007895 ORTHO05D010017 9.6e-270 933.3 635 67.6
VMungo0540G0331 Vigna mungo HOM05D007895 ORTHO05D010017 3.7e-269 931.4 635 67.6
Medtr2g022910 Medicago truncatula HOM05D007895 ORTHO05D010017 5.3e-268 927.5 641 66.0
TPR.G7647 Trifolium pratense HOM05D007895 ORTHO05D010017 1.0e-266 923.3 635 66.3
EL10Ac8g20029 Beta vulgaris HOM05D007895 ORTHO05D010017 1.3e-266 922.9 634 67.5
FvH4_3g02321 Fragaria vesca HOM05D007895 ORTHO05D010017 1.3e-266 922.9 637 66.9
Phvul.006G150500 Phaseolus vulgaris HOM05D007895 ORTHO05D010017 1.3e-266 922.9 635 67.4
Rhsim13G0155200 Rhododendron simsii HOM05D007895 ORTHO05D010017 1.3e-266 922.9 635 67.7
CSS0036667 Camellia sinensis var. sinensis HOM05D007895 ORTHO05D010017 8.4e-266 920.2 633 67.9
Nitab4.5_0003254g0060 Nicotiana tabacum HOM05D007895 ORTHO05D010017 8.4e-266 920.2 634 66.9
Nitab4.5_0007482g0010 Nicotiana tabacum HOM05D007895 ORTHO05D010017 8.4e-266 920.2 634 66.7
PGR004G2409 Punica granatum HOM05D007895 ORTHO05D010017 2.5e-265 918.7 633 66.0
Manes.17G037900 Manihot esculenta HOM05D007895 ORTHO05D010017 3.2e-265 918.3 634 66.9
Psat1g181720 Pisum sativum HOM05D007895 ORTHO05D010017 2.7e-264 915.2 636 66.4
CAN.G569.16 Capsicum annuum HOM05D007895 ORTHO05D010017 3.0e-263 911.8 634 67.0
Lalb_Chr18g0056281 Lupinus albus HOM05D007895 ORTHO05D010017 6.7e-263 910.6 635 67.1
RcHm_v2.0_Chr5g0003541 Rosa chinensis HOM05D007895 ORTHO05D010017 6.7e-263 910.6 637 66.2
Cc09_g01830 Coffea canephora HOM05D007895 ORTHO05D010017 5.3e-260 901.0 633 65.7
COL.COLO4_31754 Corchorus olitorius HOM05D007895 ORTHO05D010017 6.9e-260 900.6 592 69.6
Ciclev10017921m.g Citrus clementina HOM05D007895 ORTHO05D010017 5.0e-258 894.4 634 65.5
MBI18_g12452_MAGBIO Magnolia biondii HOM05D007895 ORTHO05D010017 2.5e-254 882.1 637 65.5
Lj6g0014344 Lotus japonicus HOM05D007895 ORTHO05D010017 3.4e-251 871.7 605 66.3
Ah.09g235010 Amaranthus hybridus HOM05D007895 ORTHO05D010017 7.7e-243 844.0 623 62.6
Lsat_1_v5_gn_7_17681 Lactuca sativa HOM05D007895 ORTHO05D010017 2.4e-236 822.4 638 59.9
THA.LOC104806298 Tarenaya hassleriana HOM05D007895 ORTHO05D010017 1.1e-228 797.0 637 57.3
ATR0752G052 Amborella trichopoda HOM05D007895 ORTHO05D010017 1.0e-226 790.4 647 58.4
BcaNung02255 Brassica carinata HOM05D007895 ORTHO05D010017 1.8e-223 779.6 644 57.6
BraA01t01263Z Brassica rapa HOM05D007895 ORTHO05D010017 1.8e-223 779.6 638 57.5
BolC1t01543H Brassica oleracea HOM05D007895 ORTHO05D010017 7.5e-222 774.2 638 56.7
BcaC09g51191 Brassica carinata HOM05D007895 ORTHO05D010017 9.8e-222 773.9 635 57.0
C01p15890 Brassica napus HOM05D007895 ORTHO05D010017 9.8e-222 773.9 635 57.0
CDE02G0632 Ceratophyllum demersum HOM05D007895 ORTHO05D010017 4.2e-217 758.4 635 56.1
Carub.0007s1948 Capsella rubella HOM05D007895 ORTHO05D010017 1.4e-215 753.4 640 55.9
Aqoxy1G03251 Aquilegia oxysepala HOM05D007895 ORTHO05D010017 2.0e-211 739.6 534 64.4
A01p13190 Brassica napus HOM05D007895 ORTHO05D010017 7.3e-209 731.1 638 55.2
Sp7g20040 Schrenkiella parvula HOM05D007895 ORTHO05D010017 5.2e-207 724.9 639 54.0
CDE05G3159 Ceratophyllum demersum HOM05D007895 ORTHO05D010017 7.3e-201 704.5 545 59.3
Mapoly0063s0045 Marchantia polymorpha HOM05D007895 ORTHO05D010017 4.4e-174 615.5 641 48.2
AagrBONN_evm.TU.Sc2ySwM_117.3222 Anthoceros agrestis HOM05D007895 ORTHO05D010017 8.7e-170 601.3 640 47.2
SMO351G0184 Selaginella moellendorffii HOM05D007895 ORTHO05D010017 9.3e-164 581.3 642 45.8
GSVIVG01002953001 Vitis vinifera HOM05D007895 ORTHO05D010017 5.1e-154 548.9 382 68.1
Mapoly0021s0002 Marchantia polymorpha HOM05D007895 ORTHO05D010017 1.1e-127 461.5 740 35.8
CiPaw.09G090200 Carya illinoinensis HOM05D007895 ORTHO05D010017 5.5e-116 422.5 304 64.8
CANSAT56G1122 Cannabis sativa HOM05D007895 ORTHO05D010017 1.0e-106 391.7 271 66.8
MSTRG.7225 Avicennia marina HOM05D007895 ORTHO05D010017 4.0e-106 389.8 272 68.4
Cc00_g03030 Coffea canephora HOM05D007895 ORTHO05D010017 7.7e-102 375.6 274 66.1
Cpa.g.sc189.18 Carica papaya HOM05D007895 ORTHO05D010017 7.3e-100 369.0 245 69.4
AUR62021973 Chenopodium quinoa HOM05D007895 ORTHO05D010017 3.2e-95 353.6 270 61.1
AUR62012684 Chenopodium quinoa HOM05D007895 ORTHO05D010017 5.4e-95 352.8 270 60.7
Thhalv10026963m.g Eutrema salsugineum HOM05D007895 ORTHO05D010017 2.7e-94 350.5 257 63.0
AT4G21890 Arabidopsis thaliana HOM05D007895 ORTHO05D010017 2.8e-91 340.5 253 63.2
CARHR228650 Cardamine hirsuta HOM05D007895 ORTHO05D010017 4.7e-91 339.7 257 61.5
Lalb_Chr15g0087511 Lupinus albus HOM05D007895 ORTHO05D010017 1.2e-89 335.1 241 62.2
Lalb_Chr15g0087521 Lupinus albus HOM05D007895 ORTHO05D010017 1.3e-88 331.6 224 69.2
Aa31LG6G3880 Aethionema arabicum HOM05D007895 ORTHO05D010017 3.1e-82 310.5 255 55.3
Sc05g0009090 Simmondsia chinensis HOM05D007895 ORTHO05D010017 2.7e-78 297.4 252 54.4
Duzib160G0114 Durio zibethinus HOM05D007895 ORTHO05D010017 6.2e-59 233.0 257 48.6
SalBow8G0130 Salvia bowleyana HOM05D007895 ORTHO05D010017 2.8e-51 207.6 170 57.6
Lalb_Chr15g0087501 Lupinus albus HOM05D007895 ORTHO05D010017 2.3e-45 188.0 130 66.9
Eucgr.B02570 Eucalyptus grandis HOM05D001404 ORTHO05D009009 8.4e-40 169.5 381 33.6
BraA07t31231Z Brassica rapa HOM05D001404 ORTHO05D009009 4.2e-39 167.2 375 30.4
A07p36630 Brassica napus HOM05D001404 ORTHO05D009009 5.5e-39 166.8 375 30.4
CARHR063240 Cardamine hirsuta HOM05D001404 ORTHO05D002309 5.5e-39 166.8 373 30.3
CiPaw.05G145400 Carya illinoinensis HOM05D001404 ORTHO05D009009 1.6e-38 165.2 370 30.3
PGR119G0405 Punica granatum HOM05D001404 ORTHO05D009009 2.7e-38 164.5 373 31.4
arahy.Tifrunner.gnm1.ann1.2TJ8DU Arachis hypogaea HOM05D001404 ORTHO05D009009 1.0e-37 162.5 387 31.3
Mapoly0056s0134 Marchantia polymorpha HOM05D001404 ORTHO05D009009 1.8e-37 161.8 372 31.7
Hund25295 Selenicereus undatus HOM05D001404 ORTHO05D009009 1.8e-37 161.8 361 31.6
Sp5g25260 Schrenkiella parvula HOM05D001404 ORTHO05D009009 2.3e-37 161.4 374 29.9
QL03p067270 Quercus lobata HOM05D001404 ORTHO05D009009 3.9e-37 160.6 373 31.4
RcHm_v2.0_Chr4g0444821 Rosa chinensis HOM05D001404 ORTHO05D009009 5.1e-37 160.2 369 30.9
SMO091G0008 Selaginella moellendorffii HOM05D001404 ORTHO05D009009 5.1e-37 160.2 358 29.6
C06p44030 Brassica napus HOM05D001404 ORTHO05D009009 1.5e-36 158.7 374 30.5
BolC6t39476H Brassica oleracea HOM05D001404 ORTHO05D009009 1.5e-36 158.7 374 30.5
Ciclev10031837m.g Citrus clementina HOM05D001404 ORTHO05D009009 1.5e-36 158.7 371 29.4
Thhalv10018717m.g Eutrema salsugineum HOM05D001404 ORTHO05D009009 1.5e-36 158.7 375 29.3
FAN12G1952 Fragaria x ananassa HOM05D001404 ORTHO05D009009 1.5e-36 158.7 371 30.5
CANSAT01G0136 Cannabis sativa HOM05D001404 ORTHO05D009009 1.9e-36 158.3 368 30.7
Lj2g0007192 Lotus japonicus HOM05D001404 ORTHO05D009009 1.9e-36 158.3 386 30.6
THA.LOC104822951 Tarenaya hassleriana HOM05D001404 ORTHO05D009009 1.9e-36 158.3 363 32.0
AL2G29430 Arabidopsis lyrata HOM05D001404 ORTHO05D009009 2.5e-36 157.9 373 29.5
Potri.010G037600 Populus trichocarpa HOM05D001404 ORTHO05D009009 2.5e-36 157.9 376 31.9
AT1G70150 Arabidopsis thaliana HOM05D001404 ORTHO05D009009 5.7e-36 156.8 375 29.9
MD16G1084700 Malus domestica HOM05D001404 ORTHO05D009009 5.7e-36 156.8 373 30.8
FvH4_4g35220 Fragaria vesca HOM05D001404 ORTHO05D009009 7.4e-36 156.4 377 30.0
HanXRQChr17g0570291 Helianthus annuus HOM05D001404 ORTHO05D009009 7.4e-36 156.4 371 30.7
Manes.01G195300 Manihot esculenta HOM05D001404 ORTHO05D009009 7.4e-36 156.4 367 31.1
AagrBONN_evm.TU.Sc2ySwM_368.625 Anthoceros agrestis HOM05D001404 ORTHO05D009009 1.6e-35 155.2 396 30.8
Lsat_1_v5_gn_4_6141 Lactuca sativa HOM05D001404 ORTHO05D009009 1.6e-35 155.2 373 31.4
Sc14g0008480 Simmondsia chinensis HOM05D001355 ORTHO05D003368 1.6e-35 155.2 365 30.4
Medtr5g036470 Medicago truncatula HOM05D001404 ORTHO05D009009 3.7e-35 154.1 365 30.4
Os07g0481000 Oryza sativa ssp. japonica HOM05D001404 ORTHO05D009009 6.3e-35 153.3 373 30.0
Prupe.1G261400 Prunus persica HOM05D001404 ORTHO05D009009 8.2e-35 152.9 373 30.8
GSVIVG01020147001 Vitis vinifera HOM05D001404 ORTHO05D009009 1.1e-34 152.5 371 31.0
CSS0043132 Camellia sinensis var. sinensis HOM05D001404 ORTHO05D002309 1.4e-34 152.1 371 30.5
Carub.0002s1684 Capsella rubella HOM05D001404 ORTHO05D009009 1.4e-34 152.1 372 27.4
Glyma.01G037400 Glycine max HOM05D001404 ORTHO05D009009 2.4e-34 151.4 384 30.2
Duzib268G0371 Durio zibethinus HOM05D001404 ORTHO05D009009 3.1e-34 151.0 371 30.5
Aa31LG4G10750 Aethionema arabicum HOM05D001404 ORTHO05D009009 4.1e-34 150.6 383 27.9
FAN07G0845 Fragaria x ananassa HOM05D001404 ORTHO05D009009 5.3e-34 150.2 372 30.9
Ca_24163_v3 Cicer arietinum L. HOM05D001404 ORTHO05D002309 6.9e-34 149.8 369 30.1
Thecc.02G239700 Theobroma cacao HOM05D001404 ORTHO05D009009 9.0e-34 149.4 371 29.6
Gohir.A03G143500 Gossypium hirsutum HOM05D001404 ORTHO05D009009 1.5e-33 148.7 371 29.1
SHI05275 Sapria himalayana HOM05D001404 ORTHO05D009009 1.5e-33 148.7 376 30.1
TAR374G0908 Trochodendron aralioides HOM05D001404 ORTHO05D009009 1.5e-33 148.7 376 29.0
VMungo1215G3058 Vigna mungo HOM05D001404 ORTHO05D009009 2.6e-33 147.9 371 31.0
Actinidia08188 Actinidia chinensis HOM05D001404 ORTHO05D009009 3.4e-33 147.5 371 30.5
Gorai.005G187100 Gossypium raimondii HOM05D001404 ORTHO05D009009 3.4e-33 147.5 371 29.6
Sed0021588 Sechium edule HOM05D001404 ORTHO05D009009 3.4e-33 147.5 398 28.6
Lalb_Chr05g0217271 Lupinus albus HOM05D001404 ORTHO05D009009 4.5e-33 147.1 371 29.9
Migut.L01385 Erythranthe guttata HOM05D001404 ORTHO05D009009 5.9e-33 146.7 367 30.8
TWI36G0457 Tripterygium wilfordii HOM05D001404 ORTHO05D009009 1.3e-32 145.6 398 29.1
Aqoxy3G00874 Aquilegia oxysepala HOM05D001404 ORTHO05D009009 1.7e-32 145.2 371 30.2
PGSC0003DMG401022613 Solanum tuberosum HOM05D001404 ORTHO05D009009 2.2e-32 144.8 372 29.8
CDE10G0936 Ceratophyllum demersum HOM05D001404 ORTHO05D009009 3.8e-32 144.1 373 30.8
Psat2g112600 Pisum sativum HOM05D001404 ORTHO05D009009 3.8e-32 144.1 371 29.6
MSTRG.7858 Avicennia marina HOM05D001404 ORTHO05D009009 5.0e-32 143.7 368 31.2
Rhsim13G0155300 Rhododendron simsii HOM05D007895 ORTHO05D013379 6.5e-32 143.3 191 42.4
ECA234G1431 Erigeron canadensis HOM05D001404 ORTHO05D002309 8.5e-32 142.9 374 31.0
ClCG05G024960 Citrullus lanatus HOM05D001404 ORTHO05D009009 1.4e-31 142.1 361 29.9
BcaC08g46464 Brassica carinata HOM05D001404 ORTHO05D009009 2.5e-31 141.4 374 29.4
Solyc05g006410.3 Solanum lycopersicum HOM05D001404 ORTHO05D009009 2.5e-31 141.4 371 29.4
Oeu028546.1 Olea europaea HOM05D001404 ORTHO05D009009 1.2e-30 139.0 371 28.6
Peaxi162Scf00828g00020 Petunia axillaris HOM05D001404 ORTHO05D009009 1.2e-30 139.0 363 28.9
EL10Ac6g13111 Beta vulgaris HOM05D001404 ORTHO05D009009 2.1e-30 138.3 367 27.8
Cc11_g14260 Coffea canephora HOM05D001404 ORTHO05D009009 2.1e-30 138.3 373 30.6
Pp3c9_21180 Physcomitrium patens HOM05D001404 ORTHO05D009009 2.1e-30 138.3 378 27.5
Sopen05g002340 Solanum pennellii HOM05D001404 ORTHO05D009009 2.1e-30 138.3 371 28.6
FAN22G1682 Fragaria x ananassa HOM05D001404 ORTHO05D009009 2.7e-30 137.9 372 29.8
COL.COLO4_36283 Corchorus olitorius HOM05D001404 ORTHO05D002309 2.3e-29 134.8 354 29.7
Cpa.g.sc1960.1 Carica papaya HOM05D001404 ORTHO05D009009 3.0e-29 134.4 343 29.7
CAN.G159.8 Capsicum annuum HOM05D001404 ORTHO05D009009 3.9e-29 134.0 375 29.1
HPP92_001781 Vanilla planifolia HOM05D007895 ORTHO05D010017 4.3e-28 130.6 129 51.9
Gohir.D02G166800 Gossypium hirsutum HOM05D001404 ORTHO05D009009 5.7e-28 130.2 312 28.8
Haze_12124 Corylus avellana HOM05D001404 ORTHO05D002309 9.7e-28 129.4 323 29.7
SalBow2G3155 Salvia bowleyana HOM05D001404 ORTHO05D009009 1.3e-27 129.0 368 29.3
SalBow2G3257 Salvia bowleyana HOM05D001404 ORTHO05D009009 1.6e-27 128.6 356 30.6
Nitab4.5_0002312g0090 Nicotiana tabacum HOM05D001404 ORTHO05D009009 2.8e-27 127.9 319 30.4
HPP92_002468 Vanilla planifolia HOM05D001404 ORTHO05D009009 1.4e-26 125.6 304 29.6
Zm00001eb321400 Zea mays HOM05D001404 ORTHO05D009009 1.4e-26 125.6 353 29.2
PSO161G0115 Papaver somniferum HOM05D001404 ORTHO05D009009 1.8e-26 125.2 374 28.1
SMO238G0008 Selaginella moellendorffii HOM05D001404 ORTHO05D009009 1.8e-26 125.2 338 27.5
Nitab4.5_0003602g0020 Nicotiana tabacum HOM05D001404 ORTHO05D009009 6.9e-26 123.2 415 28.0
FAN17G2278 Fragaria x ananassa HOM05D001404 ORTHO05D009009 9.1e-26 122.9 240 32.1
SGA_v2.0_scaffold8G04270 Striga asiatica HOM05D001404 ORTHO05D009009 9.1e-26 122.9 396 28.0
vmacro01204 Vaccinium macrocarpon HOM05D001404 ORTHO05D009009 9.1e-26 122.9 401 26.7
Nn4g22934 Nelumbo nucifera HOM05D001404 ORTHO05D009009 1.2e-25 122.5 360 28.1
TPR.G17319 Trifolium pratense HOM05D001404 ORTHO05D009009 1.7e-24 118.6 332 28.6
arahy.Tifrunner.gnm1.ann1.VUK41S Arachis hypogaea HOM05D001404 ORTHO05D009009 3.8e-24 117.5 265 30.6
Sabra10G0028400 Salix brachista HOM05D001404 ORTHO05D009009 1.9e-23 115.2 313 29.7
CAN.G328.16 Capsicum annuum HOM05D007895 ORTHO05D010017 9.4e-23 112.8 154 41.6
CsaV3_5G031930 Cucumis sativus L. HOM05D001404 ORTHO05D009009 2.8e-19 101.3 313 28.1
Glyma.02G027500 Glycine max HOM05D001404 ORTHO05D009009 2.8e-19 101.3 243 30.5
Dinv24916 Davidia involucrata HOM05D001404 ORTHO05D009009 6.3e-19 100.1 225 31.1
CBR_g72156 Chara braunii HOM05D001404 ORTHO05D009009 1.1e-18 99.4 268 27.6
Phvul.002G076800 Phaseolus vulgaris HOM05D001404 ORTHO05D009009 1.8e-18 98.6 227 33.0
AagrBONN_evm.TU.Sc2ySwM_117.3431 Anthoceros agrestis HOM05D001404 ORTHO05D009009 1.3e-16 92.4 158 36.1
MCO10G058 Micromonas commoda HOM05D001404 ORTHO05D009009 1.3e-16 92.4 431 25.5
unitig_749.g13260 Utricularia gibba HOM05D001404 ORTHO05D009009 6.1e-14 83.6 187 29.9
AUR62026309 Chenopodium quinoa HOM05D001404 ORTHO05D009009 1.4e-13 82.4 380 23.9
ATR0712G045 Amborella trichopoda HOM05D001404 ORTHO05D009009 3.0e-13 81.3 193 28.0
Atru.chr11.1937 Acer truncatum HOM05D001404 ORTHO05D002309 7.0e-10 70.1 92 35.9
Lj4g0012021 Lotus japonicus HOM05D001404 ORTHO05D009009 3.6e-06 57.8 151 30.5
MD13G1085400 Malus domestica HOM05D001404 ORTHO05D009009 6.1e-06 57.0 86 36.0


User provided reference genes

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