Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_004065 Daucus carota HOM05D007285 ORTHO05D009224 1.7e-33 145.6 84 100.0
DCAR_008032 Daucus carota HOM05D007285 ORTHO05D009224 8.1e-23 110.2 83 79.5
Rhsim02G0132100 Rhododendron simsii HOM05D007285 ORTHO05D009224 5.2e-22 107.5 83 77.1
vmacro15913 Vaccinium macrocarpon HOM05D007285 ORTHO05D009224 2.0e-21 105.5 83 72.3
ECA234G4273 Erigeron canadensis HOM05D007285 ORTHO05D009224 7.5e-21 103.6 83 71.1
CSS0032734 Camellia sinensis var. sinensis HOM05D007285 ORTHO05D009224 1.7e-20 102.4 83 74.7
Hma1.2p1_0208F.1_g088230 Hydrangea macrophylla HOM05D007285 ORTHO05D009224 1.7e-20 102.4 83 73.5
Actinidia07587 Actinidia chinensis HOM05D007285 ORTHO05D009224 2.2e-20 102.1 76 77.6
Dinv40575 Davidia involucrata HOM05D007285 ORTHO05D009224 6.4e-20 100.5 83 71.1
Lsat_1_v5_gn_4_52261 Lactuca sativa HOM05D007285 ORTHO05D009224 4.1e-19 97.8 80 67.5
Peaxi162Scf00623g00519 Petunia axillaris HOM05D007285 ORTHO05D009224 4.1e-19 97.8 85 69.4
Nitab4.5_0005745g0020 Nicotiana tabacum HOM05D007285 ORTHO05D009224 7.1e-19 97.1 83 68.7
SalBow8G5072 Salvia bowleyana HOM05D007285 ORTHO05D009224 7.1e-19 97.1 78 74.4
MSTRG.7339 Avicennia marina HOM05D007285 ORTHO05D009224 2.1e-18 95.5 71 76.1
Haze_06424 Corylus avellana HOM05D007285 ORTHO05D009224 2.1e-18 95.5 83 71.1
Ca_18554_v3 Cicer arietinum L. HOM05D007285 ORTHO05D009224 4.6e-18 94.4 81 71.6
Migut.M01131 Erythranthe guttata HOM05D007285 ORTHO05D009224 4.6e-18 94.4 75 69.3
COL.COLO4_31450 Corchorus olitorius HOM05D007285 ORTHO05D009224 6.0e-18 94.0 83 69.9
HanXRQChr14g0435131 Helianthus annuus HOM05D007285 ORTHO05D009224 6.0e-18 94.0 83 67.5
SGA_v2.0_scaffold100G29692 Striga asiatica HOM05D007285 ORTHO05D009224 7.8e-18 93.6 71 74.6
Sabra04G0028300 Salix brachista HOM05D007285 ORTHO05D009224 1.0e-17 93.2 74 70.3
CAN.G529.14 Capsicum annuum HOM05D007285 ORTHO05D009224 1.3e-17 92.8 77 67.5
Potri.004G045400 Populus trichocarpa HOM05D007285 ORTHO05D009224 1.3e-17 92.8 77 68.8
Sopen02g022850 Solanum pennellii HOM05D007285 ORTHO05D009224 1.3e-17 92.8 83 66.3
CsaV3_1G012400 Cucumis sativus L. HOM05D007285 ORTHO05D009224 1.7e-17 92.4 75 72.0
Psat7g114520 Pisum sativum HOM05D007285 ORTHO05D009224 1.7e-17 92.4 73 72.6
Solyc02g078010.4 Solanum lycopersicum HOM05D007285 ORTHO05D009224 1.7e-17 92.4 83 66.3
Thecc.06G185100 Theobroma cacao HOM05D007285 ORTHO05D009224 1.7e-17 92.4 83 68.7
CiPaw.09G061300 Carya illinoinensis HOM05D007285 ORTHO05D009224 3.0e-17 91.7 83 66.3
Medtr4g088680 Medicago truncatula HOM05D007285 ORTHO05D009224 3.0e-17 91.7 81 65.4
Nn1g04136 Nelumbo nucifera HOM05D007285 ORTHO05D009224 3.0e-17 91.7 72 70.8
Actinidia26129 Actinidia chinensis HOM05D007285 ORTHO05D009224 5.1e-17 90.9 83 69.9
QL05p041285 Quercus lobata HOM05D007285 ORTHO05D009224 5.1e-17 90.9 80 68.8
Cc02_g13540 Coffea canephora HOM05D007285 ORTHO05D009224 6.6e-17 90.5 83 63.9
Glyma.07G198400 Glycine max HOM05D007285 ORTHO05D009224 6.6e-17 90.5 84 69.0
Gorai.010G155100 Gossypium raimondii HOM05D007285 ORTHO05D009224 1.1e-16 89.7 80 66.2
Manes.17G046800 Manihot esculenta HOM05D007285 ORTHO05D009224 1.5e-16 89.4 72 73.6
SalBow8G3155 Salvia bowleyana HOM05D007285 ORTHO05D009224 1.5e-16 89.4 66 78.8
TWI38G2229 Tripterygium wilfordii HOM05D007285 ORTHO05D009224 1.5e-16 89.4 83 63.9
ClCG03G008150 Citrullus lanatus HOM05D007285 ORTHO05D009224 1.9e-16 89.0 75 69.3
TPR.G16329 Trifolium pratense HOM05D007285 ORTHO05D009224 1.9e-16 89.0 79 67.1
Sed0001788 Sechium edule HOM05D007285 ORTHO05D009224 2.5e-16 88.6 75 69.3
PGSC0003DMG401029703 Solanum tuberosum HOM05D007285 ORTHO05D009224 2.5e-16 88.6 83 65.1
VMungo0251G0987 Vigna mungo HOM05D007285 ORTHO05D009224 2.5e-16 88.6 84 66.7
Dinv17325 Davidia involucrata HOM05D007285 ORTHO05D009224 4.3e-16 87.8 83 66.3
Gohir.D06G133300 Gossypium hirsutum HOM05D007285 ORTHO05D009224 4.3e-16 87.8 80 65.0
Gohir.A06G129300 Gossypium hirsutum HOM05D007285 ORTHO05D009224 7.3e-16 87.0 80 63.8
Prupe.4G049200 Prunus persica HOM05D007285 ORTHO05D009224 9.5e-16 86.7 83 63.9
Atru.chr10.1858 Acer truncatum HOM05D007285 ORTHO05D009224 1.2e-15 86.3 83 65.1
Glyma.13G178000 Glycine max HOM05D007285 ORTHO05D009224 1.2e-15 86.3 84 65.5
Sed0014393 Sechium edule HOM05D007285 ORTHO05D009224 1.2e-15 86.3 75 65.3
unitig_27.g24965 Utricularia gibba HOM05D007285 ORTHO05D009224 1.2e-15 86.3 84 60.7
PGR042G2867 Punica granatum HOM05D007285 ORTHO05D009224 1.6e-15 85.9 83 65.1
TWI63G1057 Tripterygium wilfordii HOM05D007285 ORTHO05D009224 1.6e-15 85.9 83 65.1
Ciclev10017252m.g Citrus clementina HOM05D007285 ORTHO05D009224 2.1e-15 85.5 83 63.9
MD00G1116000 Malus domestica HOM05D007285 ORTHO05D009224 2.1e-15 85.5 83 61.4
MELO3C002614.2 Cucumis melo HOM05D007285 ORTHO05D009224 3.6e-15 84.7 62 75.8
RcHm_v2.0_Chr5g0008721 Rosa chinensis HOM05D007285 ORTHO05D009224 3.6e-15 84.7 83 59.0
TAR626G1757 Trochodendron aralioides HOM05D007285 ORTHO05D009224 3.6e-15 84.7 78 61.5
arahy.Tifrunner.gnm1.ann1.J7N80D Arachis hypogaea HOM05D007285 ORTHO05D009224 4.7e-15 84.3 78 62.8
arahy.Tifrunner.gnm1.ann1.VSLT1W Arachis hypogaea HOM05D007285 ORTHO05D009224 4.7e-15 84.3 78 62.8
FvH4_3g08990 Fragaria vesca HOM05D007285 ORTHO05D009224 4.7e-15 84.3 72 65.3
FAN16G1611 Fragaria x ananassa HOM05D007285 ORTHO05D009224 4.7e-15 84.3 72 65.3
FAN21G1653 Fragaria x ananassa HOM05D007285 ORTHO05D009224 4.7e-15 84.3 84 59.5
FAN25G3510 Fragaria x ananassa HOM05D007285 ORTHO05D009224 4.7e-15 84.3 72 65.3
MD10G1292600 Malus domestica HOM05D007285 ORTHO05D009224 4.7e-15 84.3 72 65.3
Eucgr.E03264 Eucalyptus grandis HOM05D007285 ORTHO05D009224 6.2e-15 84.0 83 62.7
Hund23773 Selenicereus undatus HOM05D007285 ORTHO05D009224 6.2e-15 84.0 83 62.7
Carub.0001s2669 Capsella rubella HOM05D007285 ORTHO05D009224 1.1e-14 83.2 80 57.5
PSO541G0778 Papaver somniferum HOM05D007285 ORTHO05D009224 1.4e-14 82.8 83 60.2
Sc05g0007570 Simmondsia chinensis HOM05D007285 ORTHO05D009224 1.4e-14 82.8 83 61.4
THA.LOC104820545 Tarenaya hassleriana HOM05D007285 ORTHO05D009224 2.4e-14 82.0 83 60.2
Phvul.002G229600 Phaseolus vulgaris HOM05D007285 ORTHO05D009224 3.1e-14 81.6 84 63.1
Aa31LG6G10160 Aethionema arabicum HOM05D007285 ORTHO05D009224 4.0e-14 81.3 74 59.5
BcaB03g12118 Brassica carinata HOM05D007285 ORTHO05D009224 4.0e-14 81.3 83 57.8
AT1G28250 Arabidopsis thaliana HOM05D007285 ORTHO05D009224 5.2e-14 80.9 77 57.1
BolC3t19748H Brassica oleracea HOM05D007285 ORTHO05D009224 5.2e-14 80.9 83 57.8
Lalb_Chr15g0089751 Lupinus albus HOM05D007285 ORTHO05D009224 5.2e-14 80.9 83 62.7
AL1G41800 Arabidopsis lyrata HOM05D007285 ORTHO05D009224 6.8e-14 80.5 83 55.4
EL10Ac8g20395 Beta vulgaris HOM05D007285 ORTHO05D009224 6.8e-14 80.5 83 60.2
AUR62017028 Chenopodium quinoa HOM05D007285 ORTHO05D009224 2.6e-13 78.6 83 60.2
Thhalv10009792m.g Eutrema salsugineum HOM05D007285 ORTHO05D009224 9.9e-13 76.6 84 54.8
Lj4g0016922 Lotus japonicus HOM05D007285 ORTHO05D009224 9.9e-13 76.6 81 63.0
BcaB07g32433 Brassica carinata HOM05D007285 ORTHO05D009224 1.3e-12 76.3 83 53.0
BolC5t31425H Brassica oleracea HOM05D007285 ORTHO05D009224 1.3e-12 76.3 74 56.8
CANSAT35G0751 Cannabis sativa HOM05D007285 ORTHO05D009224 1.3e-12 76.3 83 56.6
A09p37820 Brassica napus HOM05D007285 ORTHO05D009224 1.7e-12 75.9 74 56.8
BraA09t39294Z Brassica rapa HOM05D007285 ORTHO05D009224 1.7e-12 75.9 74 56.8
CARHR027740 Cardamine hirsuta HOM05D007285 ORTHO05D009224 2.9e-12 75.1 75 53.3
BcaC05g26830 Brassica carinata HOM05D007285 ORTHO05D009224 3.8e-12 74.7 74 55.4
HPP92_007016 Vanilla planifolia HOM05D007285 ORTHO05D009224 4.9e-12 74.3 74 59.5
C05p27060 Brassica napus HOM05D007285 ORTHO05D009224 1.1e-11 73.2 73 54.8
Zm00001eb305570 Zea mays HOM05D007285 ORTHO05D009224 3.2e-11 71.6 74 55.4
CDE01G0551 Ceratophyllum demersum HOM05D007285 ORTHO05D009224 5.4e-11 70.9 77 54.5
Ah.09g237440 Amaranthus hybridus HOM05D007285 ORTHO05D009224 4.6e-10 67.8 83 50.6
C03p74970 Brassica napus HOM05D007285 ORTHO05D009224 4.6e-10 67.8 109 44.0
BcaC01g00030 Brassica carinata HOM05D007285 ORTHO05D009224 1.0e-09 66.6 109 44.0
ATR0763G085 Amborella trichopoda HOM05D007285 ORTHO05D009224 6.6e-09 63.9 79 50.6
SEGI_38595 Sequoiadendron giganteum HOM05D007285 ORTHO05D009224 6.2e-07 57.4 81 45.7


User provided reference genes

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