Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_004048 Daucus carota HOM05D007160 ORTHO05D005331 1.9e-74 282.7 177 100.0
DCAR_008006 Daucus carota HOM05D007160 ORTHO05D005331 2.8e-41 172.6 174 58.0
Cfa000523 Carpinus fangiana HOM05D007160 ORTHO05D005331 2.5e-18 96.3 123 51.2
Cc02_g13790 Coffea canephora HOM05D007160 ORTHO05D005331 1.3e-17 94.0 123 51.2
Actinidia16571 Actinidia chinensis HOM05D007160 ORTHO05D005331 1.2e-15 87.4 176 39.8
Dinv17351 Davidia involucrata HOM05D007160 ORTHO05D005331 1.2e-15 87.4 159 42.8
Nitab4.5_0000516g0060 Nicotiana tabacum HOM05D007160 ORTHO05D005331 2.6e-15 86.3 114 48.2
Lj6g0014856 Lotus japonicus HOM05D007160 ORTHO05D005331 3.4e-15 85.9 135 47.4
Nitab4.5_0001375g0120 Nicotiana tabacum HOM05D007160 ORTHO05D005331 5.8e-15 85.1 125 44.8
Nitab4.5_0001375g0150 Nicotiana tabacum HOM05D007160 ORTHO05D005331 1.0e-14 84.3 114 47.4
Oeu014779.1 Olea europaea HOM05D007160 ORTHO05D005331 6.5e-14 81.6 138 40.6
SalBow8G4606 Salvia bowleyana HOM05D007160 ORTHO05D005331 2.5e-13 79.7 86 51.2
CiPaw.10G052400 Carya illinoinensis HOM05D007160 ORTHO05D005331 3.2e-13 79.3 128 40.6
Ca_18588_v3 Cicer arietinum L. HOM05D007160 ORTHO05D005331 3.2e-13 79.3 127 45.7
VMungo0540G2483 Vigna mungo HOM05D007160 ORTHO05D005331 3.2e-13 79.3 126 43.7
Nitab4.5_0000516g0070 Nicotiana tabacum HOM05D007160 ORTHO05D005331 4.2e-13 79.0 125 42.4
Sed0008189 Sechium edule HOM05D007160 ORTHO05D005331 5.5e-13 78.6 92 54.3
Glyma.15G077600 Glycine max HOM05D007160 ORTHO05D005331 7.2e-13 78.2 124 45.2
Medtr4g088385 Medicago truncatula HOM05D007160 ORTHO05D005331 7.2e-13 78.2 117 43.6
Nitab4.5_0000516g0090 Nicotiana tabacum HOM05D007160 ORTHO05D005331 7.2e-13 78.2 125 42.4
Nitab4.5_0001375g0140 Nicotiana tabacum HOM05D007160 ORTHO05D005331 9.3e-13 77.8 113 46.9
Prupe.4G052200 Prunus persica HOM05D007160 ORTHO05D005331 9.3e-13 77.8 98 54.1
QL05p042103 Quercus lobata HOM05D007160 ORTHO05D005331 1.6e-12 77.0 89 55.1
QL05p042154 Quercus lobata HOM05D007160 ORTHO05D005331 1.6e-12 77.0 89 55.1
Lsat_1_v5_gn_7_22701 Lactuca sativa HOM05D007160 ORTHO05D005331 6.1e-12 75.1 137 41.6
Hma1.2p1_0558F.1_g178530 Hydrangea macrophylla HOM05D007160 ORTHO05D005331 7.9e-12 74.7 103 48.5
SalBow8G5472 Salvia bowleyana HOM05D007160 ORTHO05D005331 7.9e-12 74.7 128 38.3
Medtr2g014400 Medicago truncatula HOM05D007160 ORTHO05D005331 1.0e-11 74.3 120 43.3
Sed0007130 Sechium edule HOM05D007160 ORTHO05D005331 1.0e-11 74.3 131 45.0
TAR624G0339 Trochodendron aralioides HOM05D007160 ORTHO05D005331 1.0e-11 74.3 182 33.5
SalBow8G2878 Salvia bowleyana HOM05D007160 ORTHO05D005331 1.3e-11 73.9 128 38.3
Lj4g0028244 Lotus japonicus HOM05D007160 ORTHO05D005331 1.8e-11 73.6 98 46.9
Psat1g203080 Pisum sativum HOM05D007160 ORTHO05D005331 1.8e-11 73.6 131 42.0
Gorai.011G030000 Gossypium raimondii HOM05D007160 ORTHO05D005331 2.3e-11 73.2 125 42.4
Potri.011G057500 Populus trichocarpa HOM05D007160 ORTHO05D005331 2.3e-11 73.2 110 43.6
Ca_00358_v3 Cicer arietinum L. HOM05D007160 ORTHO05D005331 3.0e-11 72.8 121 43.0
Ca_30973_v3 Cicer arietinum L. HOM05D007160 ORTHO05D005331 3.0e-11 72.8 121 43.0
CsaV3_6G050380 Cucumis sativus L. HOM05D007160 ORTHO05D005331 3.0e-11 72.8 104 50.0
Glyma.07G201100 Glycine max HOM05D007160 ORTHO05D005331 3.9e-11 72.4 124 41.9
Peaxi162Scf00031g00084 Petunia axillaris HOM05D007160 ORTHO05D005331 3.9e-11 72.4 110 41.8
PGR042G2677 Punica granatum HOM05D007160 ORTHO05D005331 5.1e-11 72.0 199 34.2
TAR627G1090 Trochodendron aralioides HOM05D018497 ORTHO05D005331 5.1e-11 72.0 139 41.7
Dinv40598 Davidia involucrata HOM05D007882 ORTHO05D009870 6.7e-11 71.6 116 43.1
Gohir.D10G028200 Gossypium hirsutum HOM05D007160 ORTHO05D005331 6.7e-11 71.6 137 40.1
MELO3C007263.2 Cucumis melo HOM05D007160 ORTHO05D005331 8.7e-11 71.2 104 49.0
Duzib235G1074 Durio zibethinus HOM05D007160 ORTHO05D005331 8.7e-11 71.2 140 42.9
Phvul.006G182700 Phaseolus vulgaris HOM05D007160 ORTHO05D005331 8.7e-11 71.2 115 42.6
MSTRG.15854 Avicennia marina HOM05D007160 ORTHO05D005331 1.1e-10 70.9 125 40.8
Potri.004G048301 Populus trichocarpa HOM05D007160 ORTHO05D005331 1.1e-10 70.9 117 42.7
Lalb_Chr20g0121591 Lupinus albus HOM05D007160 ORTHO05D005331 1.5e-10 70.5 120 40.8
VMungo0251G1795 Vigna mungo HOM05D007160 ORTHO05D005331 3.3e-10 69.3 119 42.9
CiPaw.09G063200 Carya illinoinensis HOM05D007160 ORTHO05D005331 4.3e-10 68.9 109 46.8
Sopen02g022600 Solanum pennellii HOM05D007160 ORTHO05D005331 4.3e-10 68.9 128 40.6
Haze_06386 Corylus avellana HOM05D007160 ORTHO05D005331 5.7e-10 68.6 117 43.6
Prupe.4G052000 Prunus persica HOM05D007160 ORTHO05D005331 5.7e-10 68.6 100 52.0
Gohir.A10G027800 Gossypium hirsutum HOM05D007160 ORTHO05D005331 9.7e-10 67.8 137 40.1
Peaxi162Scf00926g00031 Petunia axillaris HOM05D007160 ORTHO05D005331 1.3e-09 67.4 79 46.8
ClCG01G023230 Citrullus lanatus HOM05D007160 ORTHO05D005331 2.2e-09 66.6 146 40.4
Duzib192G1060 Durio zibethinus HOM05D007160 ORTHO05D005331 2.2e-09 66.6 158 40.5
Glyma.13G175300 Glycine max HOM05D007160 ORTHO05D005331 2.2e-09 66.6 86 48.8
Sabra04G0030300 Salix brachista HOM05D007160 ORTHO05D005331 2.2e-09 66.6 115 41.7
Solyc02g077710.1 Solanum lycopersicum HOM05D007160 ORTHO05D005331 2.2e-09 66.6 128 39.8
Rhsim02G0134300 Rhododendron simsii HOM05D007160 ORTHO05D005331 2.8e-09 66.2 182 35.7
CAN.G529.50 Capsicum annuum HOM05D007160 ORTHO05D005331 3.7e-09 65.9 110 40.0
arahy.Tifrunner.gnm1.ann1.704E4A Arachis hypogaea HOM05D007160 ORTHO05D005331 4.8e-09 65.5 125 40.8
Nitab4.5_0004359g0050 Nicotiana tabacum HOM05D007160 ORTHO05D005331 4.8e-09 65.5 133 36.8
Sabra11G0039600 Salix brachista HOM05D007160 ORTHO05D005331 4.8e-09 65.5 126 37.3
Cpa.g.sc27.8 Carica papaya HOM05D007160 ORTHO05D005331 6.3e-09 65.1 90 51.1
Phvul.002G232100 Phaseolus vulgaris HOM05D007160 ORTHO05D005331 8.2e-09 64.7 88 50.0
Duzib160G0215 Durio zibethinus HOM05D007160 ORTHO05D005331 1.1e-08 64.3 121 45.5
CANSAT35G1941 Cannabis sativa HOM05D007160 ORTHO05D005331 1.4e-08 63.9 109 43.1
FvH4_3g08671 Fragaria vesca HOM05D007160 ORTHO05D005331 1.4e-08 63.9 90 51.1
FAN11G0877 Fragaria x ananassa HOM05D007160 ORTHO05D005331 1.4e-08 63.9 90 51.1
Glyma.13G236100 Glycine max HOM05D007160 ORTHO05D005331 1.4e-08 63.9 91 44.0
MD05G1310400 Malus domestica HOM05D007160 ORTHO05D005331 1.4e-08 63.9 131 39.7
Nitab4.5_0001955g0170 Nicotiana tabacum HOM05D007160 ORTHO05D005331 1.8e-08 63.5 117 36.8
TAR629G2975 Trochodendron aralioides HOM05D018497 ORTHO05D021348 2.4e-08 63.2 119 41.2
Gorai.009G167000 Gossypium raimondii HOM05D007160 ORTHO05D005331 3.1e-08 62.8 187 33.7
FAN16G2322 Fragaria x ananassa HOM05D007160 ORTHO05D005331 4.1e-08 62.4 151 38.4
Peaxi162Scf01018g00012 Petunia axillaris HOM05D007160 ORTHO05D005331 4.1e-08 62.4 126 37.3
ECA236G4287 Erigeron canadensis HOM05D007160 ORTHO05D005331 6.9e-08 61.6 135 40.0
Nitab4.5_0003341g0030 Nicotiana tabacum HOM05D007160 ORTHO05D005331 6.9e-08 61.6 127 34.6
PGSC0003DMG400022807 Solanum tuberosum HOM05D007160 ORTHO05D005331 6.9e-08 61.6 130 34.6
MSTRG.13207 Avicennia marina HOM05D007160 ORTHO05D005331 9.0e-08 61.2 103 43.7
Gohir.D05G162000 Gossypium hirsutum HOM05D007160 ORTHO05D005331 9.0e-08 61.2 191 33.0
Manes.17G049000 Manihot esculenta HOM05D007160 ORTHO05D005331 9.0e-08 61.2 97 44.3
FAN21G2372 Fragaria x ananassa HOM05D007160 ORTHO05D005331 1.2e-07 60.8 109 45.9
PGSC0003DMG400031775 Solanum tuberosum HOM05D007160 ORTHO05D005331 1.2e-07 60.8 138 33.3
CSS0024231 Camellia sinensis var. sinensis HOM05D007160 ORTHO05D005331 2.0e-07 60.1 99 43.4
Migut.H01472 Erythranthe guttata HOM05D007160 ORTHO05D005331 2.0e-07 60.1 95 43.2
MD10G1289700 Malus domestica HOM05D007160 ORTHO05D005331 4.5e-07 58.9 113 40.7
Oeu001099.1 Olea europaea HOM05D007160 ORTHO05D005331 4.5e-07 58.9 107 39.3
TPR.G19911 Trifolium pratense HOM05D007160 ORTHO05D005331 4.5e-07 58.9 138 39.1
arahy.Tifrunner.gnm1.ann1.AUV6LD Arachis hypogaea HOM05D007160 ORTHO05D005331 5.9e-07 58.5 208 32.7
Nitab4.5_0006098g0020 Nicotiana tabacum HOM05D007160 ORTHO05D005331 7.7e-07 58.2 79 43.0
Ciclev10016200m.g Citrus clementina HOM05D007160 ORTHO05D005331 1.0e-06 57.8 106 38.7
Gohir.A05G159300 Gossypium hirsutum HOM05D007160 ORTHO05D005331 1.3e-06 57.4 147 38.1
Sc23g0001700 Simmondsia chinensis HOM05D028926 ORTHO05D005331 1.3e-06 57.4 144 34.7
TWI63G1823 Tripterygium wilfordii HOM05D007160 ORTHO05D005331 2.2e-06 56.6 86 45.3
PSO210G1528 Papaver somniferum HOM05D025247 ORTHO05D050219 3.8e-06 55.8 120 36.7
Thecc.06G181500 Theobroma cacao HOM05D007160 ORTHO05D005331 6.5e-06 55.1 151 34.4
EL10Ac8g20435 Beta vulgaris HOM05D007160 ORTHO05D005331 8.5e-06 54.7 97 39.2
PSO832G0372 Papaver somniferum HOM05D025247 ORTHO05D050219 8.5e-06 54.7 121 33.9


User provided reference genes

Program Settings