Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_004037 Daucus carota HOM05D009288 ORTHO05D011444 1.2e-219 766.1 373 100.0
MSTRG.7368 Avicennia marina HOM05D009288 ORTHO05D011444 2.4e-90 336.7 378 49.7
Oeu012164.1 Olea europaea HOM05D009288 ORTHO05D011444 2.0e-89 333.6 387 49.4
PGSC0003DMG400031772 Solanum tuberosum HOM05D009288 ORTHO05D011444 2.0e-89 333.6 427 47.3
MSTRG.15840 Avicennia marina HOM05D009288 ORTHO05D011444 4.4e-89 332.4 371 49.6
DCAR_028039 Daucus carota HOM05D009288 ORTHO05D011444 1.3e-88 330.9 376 51.1
Oeu001096.1 Olea europaea HOM05D009288 ORTHO05D011444 6.4e-88 328.6 386 51.8
Nitab4.5_0005016g0020 Nicotiana tabacum HOM05D009288 ORTHO05D000173 1.1e-87 327.8 436 45.9
Sopen02g022400 Solanum pennellii HOM05D009288 ORTHO05D011444 9.2e-87 324.7 424 46.5
Peaxi162Scf00697g00054 Petunia axillaris HOM05D009288 ORTHO05D011444 2.1e-86 323.6 445 44.3
CAN.G79.87 Capsicum annuum HOM05D009288 ORTHO05D011444 1.0e-85 321.2 428 44.6
Migut.H01464 Erythranthe guttata HOM05D009288 ORTHO05D011444 4.3e-84 315.8 379 49.9
Nitab4.5_0002114g0180 Nicotiana tabacum HOM05D009288 ORTHO05D011444 5.6e-84 315.5 435 45.5
Migut.M01095 Erythranthe guttata HOM05D009288 ORTHO05D011444 2.1e-83 313.5 382 48.2
Solyc10g008920.1 Solanum lycopersicum HOM05D009288 ORTHO05D011444 4.7e-83 312.4 438 45.9
Cc02_g14100 Coffea canephora HOM05D009288 ORTHO05D011444 1.1e-82 311.2 399 46.6
Sopen10g004710 Solanum pennellii HOM05D009288 ORTHO05D011444 1.1e-82 311.2 438 44.3
Peaxi162Scf00490g00074 Petunia axillaris HOM05D009288 ORTHO05D011444 4.0e-82 309.3 437 45.3
PGSC0003DMG400022835 Solanum tuberosum HOM05D009288 ORTHO05D011444 1.5e-81 307.4 430 45.8
Nitab4.5_0005043g0050 Nicotiana tabacum HOM05D009288 ORTHO05D011444 8.4e-80 301.6 437 43.7
SGA_v2.0_scaffold16G07649 Striga asiatica HOM05D009288 ORTHO05D011444 1.0e-77 294.7 386 46.6
Rhsim13G0181100 Rhododendron simsii HOM05D009288 ORTHO05D011444 2.3e-77 293.5 369 48.0
CSS0036897 Camellia sinensis var. sinensis HOM05D009288 ORTHO05D011444 3.9e-77 292.7 373 46.4
CAN.G1876.1 Capsicum annuum HOM05D009288 ORTHO05D011444 4.3e-76 289.3 434 43.3
SalBow8G2277 Salvia bowleyana HOM05D009288 ORTHO05D011444 1.4e-74 284.3 386 44.0
SGA_v2.0_scaffold309G48159 Striga asiatica HOM05D009288 ORTHO05D011444 9.0e-74 281.6 379 45.6
SalBow7G2427 Salvia bowleyana HOM05D009288 ORTHO05D011444 2.2e-72 276.9 366 45.9
Actinidia16578 Actinidia chinensis HOM05D001211 ORTHO05D001084 5.4e-71 272.3 207 61.8
SalBow7G0267 Salvia bowleyana HOM05D009288 ORTHO05D011444 5.4e-71 272.3 369 45.3
vmacro03898 Vaccinium macrocarpon HOM05D000288 ORTHO05D011444 3.0e-69 266.5 366 44.5
Dinv17366 Davidia involucrata HOM05D009288 ORTHO05D011444 9.0e-66 255.0 188 64.4
Hma1.2p1_0608F.1_g188330 Hydrangea macrophylla HOM05D009288 ORTHO05D011444 9.0e-66 255.0 377 42.7
Solyc02g077490.3 Solanum lycopersicum HOM05D009288 ORTHO05D011444 9.0e-66 255.0 168 69.0
Nitab4.5_0008221g0030 Nicotiana tabacum HOM05D000288 ORTHO05D011444 2.6e-65 253.4 430 39.3
Hma1.2p1_1465F.1_g285290 Hydrangea macrophylla HOM05D009288 ORTHO05D011444 2.6e-41 173.7 315 39.7
Actinidia05663 Actinidia chinensis HOM05D000288 ORTHO05D000173 1.2e-20 105.1 74 63.5
QL03p014248 Quercus lobata HOM05D008582 ORTHO05D010200 1.8e-10 71.2 198 26.3
Solyc08g078620.1 Solanum lycopersicum HOM05D000886 ORTHO05D000525 4.2e-07 60.1 199 26.1
Sopen08g027100 Solanum pennellii HOM05D000886 ORTHO05D000525 5.5e-07 59.7 199 26.1
Peaxi162Scf00174g00122 Petunia axillaris HOM05D000886 ORTHO05D000525 2.1e-06 57.8 153 31.4
CiPaw.07G030600 Carya illinoinensis HOM05D008582 ORTHO05D010200 6.1e-06 56.2 155 29.0


User provided reference genes

Program Settings