Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_003911 Daucus carota HOM05D007451 ORTHO05D009399 3.8e-84 315.1 193 100.0
Lj1C1189G10 Lonicera japonica HOM05D007451 ORTHO05D009399 1.1e-27 127.5 111 59.5
CSS0045800 Camellia sinensis var. sinensis HOM05D007451 ORTHO05D009399 5.6e-27 125.2 107 60.7
ECA246G3905 Erigeron canadensis HOM05D007451 ORTHO05D009399 7.3e-27 124.8 107 59.8
HanXRQChr04g0114281 Helianthus annuus HOM05D007451 ORTHO05D009399 2.1e-26 123.2 103 62.1
Oeu031273.1 Olea europaea HOM05D007451 ORTHO05D009399 6.1e-26 121.7 111 59.5
Lsat_1_v5_gn_7_28421 Lactuca sativa HOM05D007451 ORTHO05D009399 1.0e-25 120.9 110 62.7
Atru.chr10.1223 Acer truncatum HOM05D005618 ORTHO05D007278 2.6e-24 116.3 107 57.0
Cc10_g10170 Coffea canephora HOM05D007451 ORTHO05D009399 2.6e-24 116.3 111 55.9
AL4G30550 Arabidopsis lyrata HOM05D007451 ORTHO05D009399 2.2e-23 113.2 107 57.0
Sp4g16840 Schrenkiella parvula HOM05D007451 ORTHO05D009399 2.2e-23 113.2 107 57.9
Potri.004G132600 Populus trichocarpa HOM05D007451 ORTHO05D009399 2.9e-23 112.8 107 57.9
AT2G34580 Arabidopsis thaliana HOM05D007451 ORTHO05D009399 6.4e-23 111.7 107 55.1
Carub.0004s1625 Capsella rubella HOM05D007451 ORTHO05D009399 6.4e-23 111.7 107 56.1
Nitab4.5_0003044g0100 Nicotiana tabacum HOM05D007451 ORTHO05D009399 8.3e-23 111.3 107 55.1
Aqoxy1G01697 Aquilegia oxysepala HOM05D007451 ORTHO05D009399 1.9e-22 110.2 110 53.6
GSVIVG01021497001 Vitis vinifera HOM05D007451 ORTHO05D009399 1.9e-22 110.2 107 57.9
Thhalv10017344m.g Eutrema salsugineum HOM05D007451 ORTHO05D009399 3.2e-22 109.4 107 56.1
TWI73G0492 Tripterygium wilfordii HOM05D007451 ORTHO05D009399 3.2e-22 109.4 107 55.1
TAR624G0819 Trochodendron aralioides HOM05D007451 ORTHO05D009399 4.1e-22 109.0 107 56.1
BcaC02g11529 Brassica carinata HOM05D007451 ORTHO05D009399 7.0e-22 108.2 107 55.1
CiPaw.10G091600 Carya illinoinensis HOM05D007451 ORTHO05D009399 1.6e-21 107.1 107 56.1
BcaB02g09525 Brassica carinata HOM05D007451 ORTHO05D009399 4.6e-21 105.5 107 53.3
CAN.G65.121 Capsicum annuum HOM05D007451 ORTHO05D009399 4.6e-21 105.5 110 52.7
CARHR128670 Cardamine hirsuta HOM05D007451 ORTHO05D009399 7.8e-21 104.8 107 53.3
CANSAT35G1195 Cannabis sativa HOM05D007451 ORTHO05D009399 1.3e-20 104.0 106 52.8
Actinidia07699 Actinidia chinensis HOM05D007451 ORTHO05D009399 1.7e-20 103.6 107 54.2
PSO541G4911 Papaver somniferum HOM05D007451 ORTHO05D009399 3.0e-20 102.8 107 52.3
PSO675G9053 Papaver somniferum HOM05D007451 ORTHO05D009399 5.0e-20 102.1 107 51.4
Manes.17G070400 Manihot esculenta HOM05D007451 ORTHO05D009399 8.6e-20 101.3 107 52.3
Eucgr.E03355 Eucalyptus grandis HOM05D007451 ORTHO05D009399 1.5e-19 100.5 111 50.5
Rhsim02G0158600 Rhododendron simsii HOM05D007451 ORTHO05D009399 1.9e-19 100.1 128 45.3
arahy.Tifrunner.gnm1.ann1.Z8IVUX Arachis hypogaea HOM05D007451 ORTHO05D009399 2.5e-19 99.8 107 48.6
TPR.G38261 Trifolium pratense HOM05D007451 ORTHO05D009399 3.3e-19 99.4 107 48.6
arahy.Tifrunner.gnm1.ann1.ZU2BT9 Arachis hypogaea HOM05D007451 ORTHO05D009399 5.6e-19 98.6 107 48.6
Medtr4g084470 Medicago truncatula HOM05D007451 ORTHO05D009399 5.6e-19 98.6 105 50.5
Psat7g130000 Pisum sativum HOM05D007451 ORTHO05D009399 7.3e-19 98.2 105 51.4
Sc17g0004890 Simmondsia chinensis HOM05D007451 ORTHO05D009399 1.2e-18 97.4 110 50.0
Hma1.2p1_0286F.1_g114180 Hydrangea macrophylla HOM05D007451 ORTHO05D009399 2.8e-18 96.3 109 52.3
Thecc.06G150100 Theobroma cacao HOM05D007451 ORTHO05D009399 4.7e-18 95.5 111 50.5
FAN11G0575 Fragaria x ananassa HOM05D007451 ORTHO05D009399 6.2e-18 95.1 117 48.7
MBI07_g23439_MAGBIO Magnolia biondii HOM05D007451 ORTHO05D009399 6.2e-18 95.1 107 46.7
Sabra04G0085400 Salix brachista HOM05D007451 ORTHO05D009399 6.2e-18 95.1 133 44.4
Nitab4.5_0003838g0080 Nicotiana tabacum HOM05D007451 ORTHO05D009399 1.1e-17 94.4 93 53.8
Ciclev10018276m.g Citrus clementina HOM05D007451 ORTHO05D009399 1.8e-17 93.6 108 49.1
EL10Ac8g19670 Beta vulgaris HOM05D007451 ORTHO05D009399 3.1e-17 92.8 107 48.6
RcHm_v2.0_Chr5g0014241 Rosa chinensis HOM05D007451 ORTHO05D009399 4.0e-17 92.4 105 47.6
BraA05t20052Z Brassica rapa HOM05D007451 ORTHO05D009399 8.9e-17 91.3 135 42.2
EL10Ac8g19669 Beta vulgaris HOM05D007451 ORTHO05D009399 2.6e-16 89.7 107 46.7
Glyma.20G018400 Glycine max HOM05D007451 ORTHO05D009399 2.6e-16 89.7 107 45.8
FAN21G0862 Fragaria x ananassa HOM05D007451 ORTHO05D009399 3.4e-16 89.4 124 46.8
VMungo0251G0908 Vigna mungo HOM05D007451 ORTHO05D009399 4.4e-16 89.0 105 45.7
BolC4t27857H Brassica oleracea HOM05D007451 ORTHO05D009399 1.3e-15 87.4 97 50.5
Eucgr.B02066 Eucalyptus grandis HOM05D007451 ORTHO05D009399 2.2e-15 86.7 111 45.9
Phvul.002G096800 Phaseolus vulgaris HOM05D007451 ORTHO05D009399 4.9e-15 85.5 106 46.2
Nn4g26566 Nelumbo nucifera HOM05D007451 ORTHO05D009399 1.9e-14 83.6 110 44.5
BolC4t23021H Brassica oleracea HOM05D005261 ORTHO05D006180 2.7e-13 79.7 84 51.2
THA.LOC104814695 Tarenaya hassleriana HOM05D007451 ORTHO05D009399 3.5e-13 79.3 107 41.1
Dinv32247 Davidia involucrata HOM05D007451 ORTHO05D009399 1.0e-12 77.8 107 43.0
FAN25G1374 Fragaria x ananassa HOM05D005618 ORTHO05D007278 1.3e-12 77.4 88 50.0
Prupe.4G081100 Prunus persica HOM05D007451 ORTHO05D009399 1.3e-12 77.4 75 57.3
AUR62002741 Chenopodium quinoa HOM05D007451 ORTHO05D009399 2.3e-12 76.6 107 44.9
AUR62030193 Chenopodium quinoa HOM05D007451 ORTHO05D009399 3.9e-12 75.9 107 45.8
A05p11060 Brassica napus HOM05D005261 ORTHO05D006180 5.1e-12 75.5 83 48.2
MD05G1283500 Malus domestica HOM05D007451 ORTHO05D009399 5.1e-12 75.5 107 43.0
AUR62002733 Chenopodium quinoa HOM05D007451 ORTHO05D009399 1.1e-11 74.3 107 43.9
Duzib192G0695 Durio zibethinus HOM05D007451 ORTHO05D009399 1.5e-11 73.9 75 54.7
FvH4_3g05500 Fragaria vesca HOM05D007451 ORTHO05D009399 2.5e-11 73.2 74 54.1
Eucgr.I02284 Eucalyptus grandis HOM05D007451 ORTHO05D009399 7.3e-11 71.6 132 38.6
Eucgr.H02213 Eucalyptus grandis HOM05D007451 ORTHO05D009399 1.2e-10 70.9 83 47.0
CSS0015635 Camellia sinensis var. sinensis HOM05D007451 ORTHO05D009399 1.4e-09 67.4 96 43.8
arahy.Tifrunner.gnm1.ann1.WBAN0Y Arachis hypogaea HOM05D007451 ORTHO05D009399 2.3e-09 66.6 85 42.4
vmacro10959 Vaccinium macrocarpon HOM05D007451 ORTHO05D009399 4.0e-09 65.9 74 44.6
Cfa000938 Carpinus fangiana HOM05D007451 ORTHO05D009399 6.8e-09 65.1 107 41.1
Glyma.07G220100 Glycine max HOM05D007451 ORTHO05D009399 1.2e-08 64.3 63 55.6
Gohir.A10G041200 Gossypium hirsutum HOM05D007451 ORTHO05D009399 3.4e-08 62.8 110 38.2
Gohir.D10G042000 Gossypium hirsutum HOM05D007451 ORTHO05D009399 3.4e-08 62.8 110 38.2
Gorai.011G044600 Gossypium raimondii HOM05D007451 ORTHO05D009399 3.4e-08 62.8 110 38.2
Zm00001eb204550 Zea mays HOM05D007451 ORTHO05D009399 4.4e-08 62.4 107 36.4
Gorai.008G053800 Gossypium raimondii HOM05D007451 ORTHO05D009399 5.8e-08 62.0 96 41.7
QL05p057933 Quercus lobata HOM05D007451 ORTHO05D009399 7.6e-08 61.6 107 38.3
Lalb_Chr16g0385141 Lupinus albus HOM05D007451 ORTHO05D009399 2.2e-07 60.1 59 55.9
Eucgr.C02335 Eucalyptus grandis HOM05D007451 ORTHO05D009399 8.4e-07 58.2 64 45.3


User provided reference genes

Program Settings