Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_003900 Daucus carota HOM05D007074 ORTHO05D008542 4.2e-119 431.4 222 100.0
Hma1.2p1_0020F.1_g014170 Hydrangea macrophylla HOM05D007074 ORTHO05D008542 1.2e-17 94.4 219 34.7
Oeu034132.1 Olea europaea HOM05D007074 ORTHO05D008542 2.8e-14 83.2 243 31.7
Prupe.4G082900 Prunus persica HOM05D007074 ORTHO05D008542 8.1e-14 81.6 231 35.5
Gohir.A05G147500 Gossypium hirsutum HOM05D007074 ORTHO05D008542 1.1e-13 81.3 254 33.5
Gohir.D05G150000 Gossypium hirsutum HOM05D007074 ORTHO05D008542 1.8e-13 80.5 254 32.7
Gorai.009G154100 Gossypium raimondii HOM05D007074 ORTHO05D008542 1.8e-13 80.5 254 32.7
Thecc.06G148300 Theobroma cacao HOM05D007074 ORTHO05D008542 1.8e-13 80.5 234 32.1
Ciclev10017572m.g Citrus clementina HOM05D007074 ORTHO05D008542 3.1e-13 79.7 232 30.6
CiPaw.10G090600 Carya illinoinensis HOM05D007074 ORTHO05D008542 6.9e-13 78.6 231 33.3
Cfa000927 Carpinus fangiana HOM05D007074 ORTHO05D008542 9.0e-13 78.2 220 35.5
COL.COLO4_31042 Corchorus olitorius HOM05D007074 ORTHO05D008542 9.0e-13 78.2 233 33.5
MD05G1281700 Malus domestica HOM05D007074 ORTHO05D008542 1.2e-12 77.8 233 35.6
MD10G1260500 Malus domestica HOM05D007074 ORTHO05D008542 7.6e-12 75.1 230 32.6
QL05p057294 Quercus lobata HOM05D007074 ORTHO05D008542 9.9e-12 74.7 226 31.9
Manes.17G071900 Manihot esculenta HOM05D007074 ORTHO05D008542 1.3e-11 74.3 226 32.3
CiPaw.09G122000 Carya illinoinensis HOM05D007074 ORTHO05D008542 1.7e-11 73.9 233 30.0
Psat1g191080 Pisum sativum HOM05D007074 ORTHO05D008542 2.9e-11 73.2 241 29.5
Psat1g191160 Pisum sativum HOM05D007074 ORTHO05D008542 2.9e-11 73.2 245 29.4
BcaB06g28786 Brassica carinata HOM05D007074 ORTHO05D008542 1.1e-10 71.2 242 31.0
Manes.15G123200 Manihot esculenta HOM05D007074 ORTHO05D008542 1.1e-10 71.2 225 30.7
TWI53G1156 Tripterygium wilfordii HOM05D007074 ORTHO05D008542 1.1e-10 71.2 219 31.5
Migut.M00897 Erythranthe guttata HOM05D007074 ORTHO05D008542 2.4e-10 70.1 219 28.8
SGA_v2.0_scaffold1478G53958 Striga asiatica HOM05D007074 ORTHO05D008542 5.4e-10 68.9 220 31.8
SGA_v2.0_scaffold1G00191 Striga asiatica HOM05D007074 ORTHO05D008542 5.4e-10 68.9 220 31.8
Medtr2g019160 Medicago truncatula HOM05D007074 ORTHO05D008542 7.1e-10 68.6 241 29.9
Nn3g20397 Nelumbo nucifera HOM05D007074 ORTHO05D008542 9.3e-10 68.2 242 29.3
Duzib235G1065 Durio zibethinus HOM05D007074 ORTHO05D008542 1.2e-09 67.8 252 31.3
FAN21G0051 Fragaria x ananassa HOM05D007074 ORTHO05D008542 1.6e-09 67.4 221 31.2
Phvul.006G166000 Phaseolus vulgaris HOM05D007074 ORTHO05D008542 1.6e-09 67.4 226 32.3
BcaB07g32617 Brassica carinata HOM05D007074 ORTHO05D008542 6.0e-09 65.5 253 29.6
TWI73G0984 Tripterygium wilfordii HOM05D007074 ORTHO05D008542 6.0e-09 65.5 218 28.4
FAN16G0984 Fragaria x ananassa HOM05D007074 ORTHO05D008542 7.9e-09 65.1 223 30.0
FAN25G3808 Fragaria x ananassa HOM05D007074 ORTHO05D008542 7.9e-09 65.1 223 29.6
CARHR029240 Cardamine hirsuta HOM05D007074 ORTHO05D008542 1.0e-08 64.7 239 31.4
TPR.G26250 Trifolium pratense HOM05D007074 ORTHO05D008542 1.0e-08 64.7 248 29.0
Eucgr.E02421 Eucalyptus grandis HOM05D007074 ORTHO05D008542 1.3e-08 64.3 230 29.6
Gohir.A06G138601 Gossypium hirsutum HOM05D007074 ORTHO05D008542 1.8e-08 63.9 219 34.7
MELO3C002739.2 Cucumis melo HOM05D007074 ORTHO05D008542 3.0e-08 63.2 224 31.2
Thhalv10017803m.g Eutrema salsugineum HOM05D007074 ORTHO05D008542 3.9e-08 62.8 253 29.6
MBI02_g24299_MAGBIO Magnolia biondii HOM05D007074 ORTHO05D008542 3.9e-08 62.8 225 32.0
Sp1g26010 Schrenkiella parvula HOM05D007074 ORTHO05D008542 3.9e-08 62.8 246 30.1
Carub.0001s2842 Capsella rubella HOM05D007074 ORTHO05D008542 5.1e-08 62.4 250 28.0
MELO3C002749.2 Cucumis melo HOM05D035155 ORTHO05D008542 8.7e-08 61.6 202 30.2
PGSC0003DMG400021166 Solanum tuberosum HOM05D007074 ORTHO05D008542 8.7e-08 61.6 230 29.6
CsaV3_1G032390 Cucumis sativus L. HOM05D007074 ORTHO05D008542 1.1e-07 61.2 218 29.8
Nn4g26598 Nelumbo nucifera HOM05D007074 ORTHO05D008542 1.1e-07 61.2 235 31.1
BcaB03g13841 Brassica carinata HOM05D007074 ORTHO05D008542 1.5e-07 60.8 246 29.7
A05p11040 Brassica napus HOM05D007074 ORTHO05D008542 1.9e-07 60.5 245 28.2
Thhalv10008361m.g Eutrema salsugineum HOM05D007074 ORTHO05D008542 1.9e-07 60.5 256 27.3
THA.LOC104814307 Tarenaya hassleriana HOM05D007074 ORTHO05D008542 1.9e-07 60.5 245 30.2
Aa31LG10G6790 Aethionema arabicum HOM05D007074 ORTHO05D008542 2.5e-07 60.1 235 30.2
Gohir.A10G042100 Gossypium hirsutum HOM05D007074 ORTHO05D008542 2.5e-07 60.1 220 31.8
Gohir.D06G143401 Gossypium hirsutum HOM05D007074 ORTHO05D008542 2.5e-07 60.1 218 31.2
Gorai.010G167100 Gossypium raimondii HOM05D007074 ORTHO05D008542 3.3e-07 59.7 218 31.2
BraA05t20049Z Brassica rapa HOM05D007074 ORTHO05D008542 5.6e-07 58.9 246 28.5
Glyma.15G092900 Glycine max HOM05D007074 ORTHO05D008542 5.6e-07 58.9 225 30.2
Potri.011G083600 Populus trichocarpa HOM05D007074 ORTHO05D008542 5.6e-07 58.9 154 30.5
A09p36350 Brassica napus HOM05D007074 ORTHO05D008542 7.4e-07 58.5 243 27.6
BolC4t27860H Brassica oleracea HOM05D007074 ORTHO05D008542 7.4e-07 58.5 250 30.4
BraA09t39159Z Brassica rapa HOM05D007074 ORTHO05D008542 7.4e-07 58.5 243 27.6
Glyma.13G219300 Glycine max HOM05D007074 ORTHO05D008542 9.6e-07 58.2 237 28.7
BraA04t18155Z Brassica rapa HOM05D007074 ORTHO05D008542 1.3e-06 57.8 263 28.1
Oeu052361.1 Olea europaea HOM05D007074 ORTHO05D008542 1.6e-06 57.4 121 35.5
CsaV3_1G032290 Cucumis sativus L. HOM05D035155 ORTHO05D008542 2.1e-06 57.0 218 26.6
FvH4_3g05300 Fragaria vesca HOM05D007074 ORTHO05D008542 2.1e-06 57.0 217 27.6
vmacro03335 Vaccinium macrocarpon HOM05D001104 ORTHO05D006535 2.1e-06 57.0 234 28.2
A04p26510 Brassica napus HOM05D007074 ORTHO05D008542 2.8e-06 56.6 250 29.2
C04p63930 Brassica napus HOM05D007074 ORTHO05D008542 2.8e-06 56.6 250 29.2
Glyma.08G097500 Glycine max HOM05D007074 ORTHO05D008542 2.8e-06 56.6 231 29.0
Potri.004G065300 Populus trichocarpa HOM05D007074 ORTHO05D008542 4.8e-06 55.8 228 28.1
arahy.Tifrunner.gnm1.ann1.4BL86F Arachis hypogaea HOM05D007074 ORTHO05D008542 6.2e-06 55.5 202 31.2
A07p10060 Brassica napus HOM05D007074 ORTHO05D008542 6.2e-06 55.5 241 29.0
BraA07t28799Z Brassica rapa HOM05D007074 ORTHO05D008542 6.2e-06 55.5 241 29.0
PGR031G2887 Punica granatum HOM05D007074 ORTHO05D008542 6.2e-06 55.5 228 25.0
AL1G44090 Arabidopsis lyrata HOM05D007074 ORTHO05D008542 8.1e-06 55.1 241 29.9
AL700U10010 Arabidopsis lyrata HOM05D007074 ORTHO05D008542 8.1e-06 55.1 241 29.9
BcaB02g09522 Brassica carinata HOM05D007074 ORTHO05D008542 8.1e-06 55.1 248 30.2


User provided reference genes

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