Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_003898 Daucus carota HOM05D007268 ORTHO05D009152 3.6e-61 238.0 119 100.0
MBI02_g20985_MAGBIO Magnolia biondii HOM05D007268 ORTHO05D009152 3.9e-39 164.9 103 74.8
TWI53G0467 Tripterygium wilfordii HOM05D007268 ORTHO05D009152 4.3e-38 161.4 108 72.2
Lalb_Chr18g0055321 Lupinus albus HOM05D007268 ORTHO05D009152 5.6e-38 161.0 101 76.2
CiPaw.10G090400 Carya illinoinensis HOM05D007268 ORTHO05D009152 2.1e-37 159.1 109 67.9
CsaV3_1G004630 Cucumis sativus L. HOM05D007268 ORTHO05D009152 2.8e-37 158.7 103 71.8
Dinv32234 Davidia involucrata HOM05D007268 ORTHO05D009152 2.8e-37 158.7 118 67.8
AUR62006739 Chenopodium quinoa HOM05D007268 ORTHO05D009152 3.7e-37 158.3 94 77.7
Manes.17G072200 Manihot esculenta HOM05D007268 ORTHO05D009152 6.2e-37 157.5 114 67.5
PGR031G1097 Punica granatum HOM05D007268 ORTHO05D009152 8.1e-37 157.1 99 76.8
ClCG03G006700 Citrullus lanatus HOM05D007268 ORTHO05D009152 1.1e-36 156.8 103 72.8
Lsat_1_v5_gn_7_27661 Lactuca sativa HOM05D007268 ORTHO05D009152 1.1e-36 156.8 94 80.9
TPR.G26254 Trifolium pratense HOM05D007268 ORTHO05D009152 1.8e-36 156.0 90 78.9
vmacro03337 Vaccinium macrocarpon HOM05D007268 ORTHO05D009152 2.4e-36 155.6 115 68.7
Oeu030940.1 Olea europaea HOM05D007268 ORTHO05D009152 3.1e-36 155.2 112 66.1
Sc24g0001710 Simmondsia chinensis HOM05D007268 ORTHO05D009152 3.1e-36 155.2 87 82.8
Aqoxy4G02868 Aquilegia oxysepala HOM05D007268 ORTHO05D009152 4.0e-36 154.8 92 77.2
Glyma.13G219500 Glycine max HOM05D007268 ORTHO05D009152 4.0e-36 154.8 100 73.0
Hund21552 Selenicereus undatus HOM05D007268 ORTHO05D009152 4.0e-36 154.8 88 80.7
Ah.04g158630 Amaranthus hybridus HOM05D007268 ORTHO05D009152 5.3e-36 154.5 116 66.4
Psat1g188600 Pisum sativum HOM05D007268 ORTHO05D009152 5.3e-36 154.5 110 65.5
ECA236G4633 Erigeron canadensis HOM05D007268 ORTHO05D009152 9.0e-36 153.7 105 71.4
CiPaw.09G121900 Carya illinoinensis HOM05D007268 ORTHO05D009152 1.5e-35 152.9 107 67.3
QL05p055849 Quercus lobata HOM05D007268 ORTHO05D009152 2.0e-35 152.5 109 67.9
CAN.G500.67 Capsicum annuum HOM05D007268 ORTHO05D009152 2.6e-35 152.1 97 72.2
Medtr2g019100 Medicago truncatula HOM05D007268 ORTHO05D009152 2.6e-35 152.1 110 65.5
Ca_00530_v3 Cicer arietinum L. HOM05D007268 ORTHO05D009152 3.4e-35 151.8 108 65.7
Nn3g20236 Nelumbo nucifera HOM05D007268 ORTHO05D009152 3.4e-35 151.8 93 77.4
Rhsim13G0115400 Rhododendron simsii HOM05D007268 ORTHO05D009152 3.4e-35 151.8 115 66.1
CARHR225150 Cardamine hirsuta HOM05D007268 ORTHO05D009152 4.5e-35 151.4 95 71.6
Cfa000925 Carpinus fangiana HOM05D007268 ORTHO05D009152 4.5e-35 151.4 114 63.2
Eucgr.E02425 Eucalyptus grandis HOM05D007268 ORTHO05D009152 4.5e-35 151.4 90 78.9
Sed0026056 Sechium edule HOM05D007268 ORTHO05D009152 4.5e-35 151.4 92 73.9
Solyc08g048540.2 Solanum lycopersicum HOM05D007268 ORTHO05D009152 4.5e-35 151.4 113 64.6
Sopen08g010950 Solanum pennellii HOM05D007268 ORTHO05D009152 4.5e-35 151.4 113 64.6
CSS0021934 Camellia sinensis var. sinensis HOM05D007268 ORTHO05D009152 5.8e-35 151.0 115 65.2
CSS0030281 Camellia sinensis var. sinensis HOM05D007268 ORTHO05D009152 5.8e-35 151.0 115 65.2
Carub.0007s2291 Capsella rubella HOM05D007268 ORTHO05D009152 5.8e-35 151.0 97 71.1
Phvul.006G166200 Phaseolus vulgaris HOM05D007268 ORTHO05D009152 5.8e-35 151.0 90 76.7
Thhalv10026609m.g Eutrema salsugineum HOM05D007268 ORTHO05D009152 7.6e-35 150.6 85 78.8
BcaNung02699 Brassica carinata HOM05D007268 ORTHO05D009152 1.0e-34 150.2 85 77.6
C07p49660 Brassica napus HOM05D007268 ORTHO05D009152 1.0e-34 150.2 85 77.6
BolC7t45467H Brassica oleracea HOM05D007268 ORTHO05D009152 1.0e-34 150.2 85 77.6
Ciclev10017240m.g Citrus clementina HOM05D007268 ORTHO05D009152 1.3e-34 149.8 111 62.2
Potri.015G138100 Populus trichocarpa HOM05D007268 ORTHO05D009152 1.3e-34 149.8 107 68.2
RcHm_v2.0_Chr5g0014441 Rosa chinensis HOM05D007268 ORTHO05D009152 1.3e-34 149.8 90 77.8
Sabra15G0149200 Salix brachista HOM05D007268 ORTHO05D009152 1.7e-34 149.4 96 71.9
Sp7g15690 Schrenkiella parvula HOM05D007268 ORTHO05D009152 1.7e-34 149.4 114 64.9
AL7G36000 Arabidopsis lyrata HOM05D007268 ORTHO05D009152 2.2e-34 149.1 114 63.2
A03p51230 Brassica napus HOM05D007268 ORTHO05D009152 2.2e-34 149.1 97 69.1
CAN.G42.16 Capsicum annuum HOM05D007268 ORTHO05D009152 2.2e-34 149.1 94 72.3
PGSC0003DMG400029871 Solanum tuberosum HOM05D007268 ORTHO05D009152 2.2e-34 149.1 113 63.7
AT4G18372 Arabidopsis thaliana HOM05D007268 ORTHO05D009152 2.9e-34 148.7 88 73.9
BraA03t14206Z Brassica rapa HOM05D007268 ORTHO05D009152 2.9e-34 148.7 97 69.1
Prupe.4G083100 Prunus persica HOM05D007268 ORTHO05D009152 2.9e-34 148.7 91 75.8
Gohir.A10G042300 Gossypium hirsutum HOM05D007268 ORTHO05D009152 4.9e-34 147.9 97 69.1
Gorai.011G045800 Gossypium raimondii HOM05D007268 ORTHO05D009152 4.9e-34 147.9 95 70.5
BcaC09g51527 Brassica carinata HOM05D007268 ORTHO05D009152 6.5e-34 147.5 85 76.5
A01p10290 Brassica napus HOM05D007268 ORTHO05D009152 6.5e-34 147.5 85 76.5
C01p12240 Brassica napus HOM05D007268 ORTHO05D009152 6.5e-34 147.5 85 76.5
BolC1t01200H Brassica oleracea HOM05D007268 ORTHO05D009152 6.5e-34 147.5 85 76.5
BraA01t00976Z Brassica rapa HOM05D007268 ORTHO05D009152 6.5e-34 147.5 85 76.5
Thecc.06G148000 Theobroma cacao HOM05D007268 ORTHO05D009152 6.5e-34 147.5 97 69.1
BcaC06g30591 Brassica carinata HOM05D007268 ORTHO05D009152 8.4e-34 147.1 85 75.3
Duzib235G0597 Durio zibethinus HOM05D007268 ORTHO05D009152 1.1e-33 146.7 97 69.1
Gohir.D10G043200 Gossypium hirsutum HOM05D007268 ORTHO05D009152 1.4e-33 146.4 95 69.5
MD05G1281500 Malus domestica HOM05D007268 ORTHO05D009152 1.4e-33 146.4 86 76.7
BcaC06g30594 Brassica carinata HOM05D007268 ORTHO05D009152 2.5e-33 145.6 115 60.0
BcaNung00009 Brassica carinata HOM05D007268 ORTHO05D009152 2.5e-33 145.6 115 60.0
Duzib160G0929 Durio zibethinus HOM05D007268 ORTHO05D009152 2.5e-33 145.6 90 72.2
THA.LOC104798395 Tarenaya hassleriana HOM05D007268 ORTHO05D009152 2.5e-33 145.6 85 76.5
Actinidia32339 Actinidia chinensis HOM05D007268 ORTHO05D009152 9.3e-33 143.7 115 62.6
SGA_v2.0_scaffold1G00193 Striga asiatica HOM05D007268 ORTHO05D009152 9.3e-33 143.7 101 65.3
Atru.chr10.1171 Acer truncatum HOM05D007268 ORTHO05D009152 1.2e-32 143.3 93 71.0
FvH4_3g05282 Fragaria vesca HOM05D007268 ORTHO05D009152 1.6e-32 142.9 106 65.1
Aa31LG6G1080 Aethionema arabicum HOM05D007268 ORTHO05D009152 2.1e-32 142.5 85 74.1
MSTRG.7499 Avicennia marina HOM05D007268 ORTHO05D009152 3.5e-32 141.7 110 60.9
unitig_37.g12097 Utricularia gibba HOM05D007268 ORTHO05D009152 4.6e-32 141.4 119 58.8
CANSAT21G2169 Cannabis sativa HOM05D007268 ORTHO05D009152 7.9e-32 140.6 99 65.7
Migut.M00895 Erythranthe guttata HOM05D007268 ORTHO05D009152 7.9e-32 140.6 120 60.0
GSVIVG01035542001 Vitis vinifera HOM05D007268 ORTHO05D009152 1.0e-31 140.2 78 82.1
HanXRQChr04g0115721 Helianthus annuus HOM05D007268 ORTHO05D009152 1.3e-31 139.8 81 81.5
ATR0618G449 Amborella trichopoda HOM05D007268 ORTHO05D009152 6.7e-31 137.5 90 70.0
FAN25G0109 Fragaria x ananassa HOM05D007268 ORTHO05D009152 6.7e-31 137.5 106 62.3
PSO541G1787 Papaver somniferum HOM05D007268 ORTHO05D009152 8.7e-31 137.1 113 61.9
unitig_92.g28163 Utricularia gibba HOM05D007268 ORTHO05D009152 8.7e-31 137.1 119 57.1
Atru.chr4.1816 Acer truncatum HOM05D007268 ORTHO05D009152 1.1e-30 136.7 93 68.8
MBI02_g43299_MAGBIO Magnolia biondii HOM05D007268 ORTHO05D009152 1.6e-29 132.9 76 78.9
Os06g0677600 Oryza sativa ssp. japonica HOM05D007268 ORTHO05D009152 2.1e-29 132.5 113 59.3
Solyc08g048520.1 Solanum lycopersicum HOM05D007268 ORTHO05D009152 2.1e-29 132.5 98 64.3
SalBow8G1886 Salvia bowleyana HOM05D007268 ORTHO05D009152 2.8e-29 132.1 76 77.6
EL10Ac4g09469 Beta vulgaris HOM05D007268 ORTHO05D009152 3.7e-29 131.7 78 78.2
Zm00001eb273860 Zea mays HOM05D007268 ORTHO05D009152 1.4e-28 129.8 113 57.5
Cc09_g08780 Coffea canephora HOM05D007268 ORTHO05D009152 2.4e-28 129.0 76 77.6
Zm00001eb224700 Zea mays HOM05D007268 ORTHO05D009152 1.2e-27 126.7 91 65.9
FAN16G0810 Fragaria x ananassa HOM05D007268 ORTHO05D009152 1.7e-26 122.9 93 63.4
HPP92_004157 Vanilla planifolia HOM05D007268 ORTHO05D009152 4.2e-25 118.2 97 60.8
arahy.Tifrunner.gnm1.ann1.H0S66A Arachis hypogaea HOM05D007268 ORTHO05D009152 5.5e-25 117.9 90 65.6
FAN21G3321 Fragaria x ananassa HOM05D007268 ORTHO05D009152 6.1e-24 114.4 87 63.2
SEGI_36221 Sequoiadendron giganteum HOM05D007268 ORTHO05D009152 8.2e-21 104.0 95 54.7
Pp3c2_29020 Physcomitrium patens HOM05D007268 ORTHO05D009152 1.4e-20 103.2 122 45.1
Mapoly0012s0147 Marchantia polymorpha HOM05D007268 ORTHO05D009152 2.0e-19 99.4 101 49.5
SMO358G0115 Selaginella moellendorffii HOM05D007268 ORTHO05D009152 3.8e-18 95.1 94 50.0
SHI24845 Sapria himalayana HOM05D007268 ORTHO05D009152 1.2e-16 90.1 76 55.3
Nitab4.5_0005488g0010 Nicotiana tabacum HOM05D007268 ORTHO05D009152 1.4e-15 86.7 111 45.9
CBR_g29441 Chara braunii HOM05D007268 ORTHO05D009152 5.7e-14 81.3 116 38.8
PRCOL_00005812 Prasinoderma coloniale HOM05D007268 ORTHO05D009152 3.2e-09 65.5 86 43.0


User provided reference genes

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